Benjamin Schmid

Benjamin Schmid

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Benjamin Schmid

Benjamin Schmid

Publications by authors named "Benjamin Schmid"

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3Dscript: animating 3D/4D microscopy data using a natural-language-based syntax.

Nat Methods 2019 04;16(4):278-280

Optical Imaging Centre Erlangen, University of Erlangen-Nuremberg, Erlangen, Germany.

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http://www.nature.com/articles/s41592-019-0359-1
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http://dx.doi.org/10.1038/s41592-019-0359-1DOI Listing
April 2019

Generation of two isogenic iPSC lines with either a heterozygous or a homozygous E280A mutation in the PSEN1 gene.

Stem Cell Res 2019 03 7;35:101403. Epub 2019 Feb 7.

Bioneer A/S, Kogle Alle 2, 2970 Hørsholm, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.scr.2019.101403DOI Listing
March 2019

Permeability analyses and three dimensional imaging of interferon gamma-induced barrier disintegration in intestinal organoids.

Stem Cell Res 2019 03 7;35:101383. Epub 2019 Feb 7.

Division of Molecular and Experimental Surgery, Department of Surgery, Friedrich-Alexander-Universität (FAU) Erlangen-Nürnberg and Universitätsklinikum Erlangen, Translational Research Center, 91054 Erlangen, Germany; Optical Imaging Centre Erlangen (OICE), Friedrich-Alexander-Universität (FAU) Erlangen-Nürnberg, 91052 Erlangen, Germany.

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http://dx.doi.org/10.1016/j.scr.2019.101383DOI Listing
March 2019

Generation of two iPSC lines with either a heterozygous V717I or a heterozygous KM670/671NL mutation in the APP gene.

Stem Cell Res 2019 01 24;34:101368. Epub 2018 Dec 24.

Group of Stem Cells and Modeling of Neurodegeneration, Department of Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark, Grønnegardsvej 7, 1870C Frederiksberg, Denmark. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S18735061183030
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http://dx.doi.org/10.1016/j.scr.2018.101368DOI Listing
January 2019

ROS-Responsive N-Alkylaminoferrocenes for Cancer-Cell-Specific Targeting of Mitochondria.

Angew Chem Int Ed Engl 2018 09 20;57(37):11943-11946. Epub 2018 Aug 20.

Friedrich-Alexander-University of Erlangen-Nürnberg, Department of Chemistry and Pharmacy, Organic Chemistry Chair II, Nikolaus-Fiebiger-Str. 10, 91058, Erlangen, Germany.

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http://doi.wiley.com/10.1002/anie.201805955
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http://dx.doi.org/10.1002/anie.201805955DOI Listing
September 2018

Great apes are sensitive to prior reliability of an informant in a gaze following task.

PLoS One 2017 22;12(11):e0187451. Epub 2017 Nov 22.

Department of Developmental and Comparative Psychology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0187451PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5699835PMC
December 2017

Modeling neurodegenerative diseases with patient-derived induced pluripotent cells: Possibilities and challenges.

N Biotechnol 2017 Oct 2;39(Pt B):190-198. Epub 2017 Jun 2.

Faculty of Health and Medical Sciences, University of Copenhagen, Gronnegaardsvej 7, 1870 Frederiksberg C, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.nbt.2017.05.009DOI Listing
October 2017

Software Framework for Controlling Unsupervised Scientific Instruments.

PLoS One 2016 29;11(8):e0161671. Epub 2016 Aug 29.

Max Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0161671PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5003368PMC
August 2017

eduSPIM: Light Sheet Microscopy in the Museum.

PLoS One 2016 25;11(8):e0161402. Epub 2016 Aug 25.

Max Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0161402PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4999180PMC
July 2017

Patient iPSC-Derived Neurons for Disease Modeling of Frontotemporal Dementia with Mutation in CHMP2B.

Stem Cell Reports 2017 03 16;8(3):648-658. Epub 2017 Feb 16.

Stem Cells and Embryology Group, Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, 1870 Frederiksberg C, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.stemcr.2017.01.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5355623PMC
March 2017

Generation of a gene-corrected isogenic control hiPSC line derived from a familial Alzheimer's disease patient carrying a L150P mutation in presenilin 1.

Stem Cell Res 2016 11 24;17(3):466-469. Epub 2016 Sep 24.

Faculty of Health and Medical Sciences, University of Copenhagen, Gronnegaardsvej 7, 1870 Frederiksberg C, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.scr.2016.09.018DOI Listing
November 2016

Generation of a gene-corrected isogenic control cell line from an Alzheimer's disease patient iPSC line carrying a A79V mutation in PSEN1.

Stem Cell Res 2016 09 7;17(2):285-288. Epub 2016 Aug 7.

Faculty of Health and Medical Sciences, University of Copenhagen, Gronnegaardsvej 7, 1870 Frederiksberg C, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.scr.2016.08.002DOI Listing
September 2016

Generation of a human induced pluripotent stem cell line via CRISPR-Cas9 mediated integration of a site-specific heterozygous mutation in CHMP2B.

Stem Cell Res 2016 07 16;17(1):148-150. Epub 2016 Jun 16.

Stem Cells and Embryology Group, Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.scr.2016.06.004DOI Listing
July 2016

Generation of a human induced pluripotent stem cell line via CRISPR-Cas9 mediated integration of a site-specific homozygous mutation in CHMP2B.

Stem Cell Res 2016 07 16;17(1):151-153. Epub 2016 Jun 16.

Stem Cells and Embryology Group, Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.scr.2016.06.005DOI Listing
July 2016

Generation of spinocerebellar ataxia type 2 patient-derived iPSC line H271.

Stem Cell Res 2016 Jan 3;16(1):159-61. Epub 2016 Jan 3.

Bioneer A/S, Kogle Allé 2, 2970 Hørsholm, Denmark.

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http://dx.doi.org/10.1016/j.scr.2015.12.027DOI Listing
January 2016

Generation of spinocerebellar ataxia type 2 patient-derived iPSC line H266.

Stem Cell Res 2016 Jan 3;16(1):166-9. Epub 2016 Jan 3.

Bioneer A/S, Kogle Allé 2, 2970 Hørsholm, Denmark.

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http://dx.doi.org/10.1016/j.scr.2015.12.029DOI Listing
January 2016

Generation of spinocerebellar ataxia type 2 patient-derived iPSC line H196.

Stem Cell Res 2016 Jan 15;16(1):199-201. Epub 2016 Jan 15.

Bioneer A/S, Kogle Allé 2, 2970 Hørsholm, Denmark.

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http://dx.doi.org/10.1016/j.scr.2015.12.049DOI Listing
January 2016

Real-time multi-view deconvolution.

Bioinformatics 2015 Oct 25;31(20):3398-400. Epub 2015 Jun 25.

Max Planck Institute of Molecular Cell Biology and Genetics, 01307 Dresden, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btv387DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4595906PMC
October 2015

Hyperspectral light sheet microscopy.

Nat Commun 2015 Sep 2;6:7990. Epub 2015 Sep 2.

Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauer Strasse 108, 01307 Dresden, Germany.

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http://dx.doi.org/10.1038/ncomms8990DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4569691PMC
September 2015

Cryptochrome-dependent and -independent circadian entrainment circuits in Drosophila.

J Neurosci 2015 Apr;35(15):6131-41

Neurobiology and Genetics, Theodor-Boveri Institute, Biocenter, University of Würzburg, Würzburg D-97074, Germany, and.

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http://dx.doi.org/10.1523/JNEUROSCI.0070-15.2015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6605168PMC
April 2015

Optical tomography complements light sheet microscopy for in toto imaging of zebrafish development.

Development 2015 Mar;142(5):1016-20

Max Planck Institute of Molecular Cell Biology and Genetics, Dresden 01307, Germany

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http://dx.doi.org/10.1242/dev.116970DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352980PMC
March 2015

High-resolution reconstruction of the beating zebrafish heart.

Nat Methods 2014 Sep 20;11(9):919-22. Epub 2014 Jul 20.

Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.

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http://dx.doi.org/10.1038/nmeth.3037DOI Listing
September 2014

iPSC-derived neurons from GBA1-associated Parkinson's disease patients show autophagic defects and impaired calcium homeostasis.

Nat Commun 2014 Jun 6;5:4028. Epub 2014 Jun 6.

1] Department of Neurodegenerative Diseases, German Center for Neurodegenerative Diseases (DZNE), Tübingen 72076, Germany [2] Hertie-Institute for Clinical Brain Research, University of Tübingen, Tübingen 72076, Germany.

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http://dx.doi.org/10.1038/ncomms5028DOI Listing
June 2014

High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics.

Nat Commun 2013 ;4:2207

Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstr. 108, 01307 Dresden, Germany.

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http://dx.doi.org/10.1038/ncomms3207DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3731668PMC
January 2014

Avoidance of heat and attraction to optogenetically induced sugar sensation as operant behavior in adult Drosophila.

J Neurogenet 2012 Sep 27;26(3-4):298-305. Epub 2012 Jul 27.

Theodor-Boveri Institute, Department of Genetics and Neurobiology, University of Würzburg, Würzburg, Germany.

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http://dx.doi.org/10.3109/01677063.2012.700266DOI Listing
September 2012

The dual-oscillator system of Drosophila melanogaster under natural-like temperature cycles.

Chronobiol Int 2012 May 11;29(4):395-407. Epub 2012 Apr 11.

Neurobiology and Genetics, Theodor-Boveri Institute, Biocenter, University of Würzburg, Germany.

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http://dx.doi.org/10.3109/07420528.2012.668505DOI Listing
May 2012

Cellular site and molecular mode of synapsin action in associative learning.

Learn Mem 2011 25;18(5):332-44. Epub 2011 Apr 25.

Universität Würzburg, Biozentrum, Neurobiologie und Genetik, 97074 Würzburg, Germany.

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http://dx.doi.org/10.1101/lm.2101411DOI Listing
August 2011

High purity chemical etching and thermal passivation process for Ge(001) as nanostructure template.

J Chem Phys 2011 Aug;135(6):064201

Experimentelle Physik 4, Universität Würzburg, D-97074 Würzburg, Germany.

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http://dx.doi.org/10.1063/1.3624902DOI Listing
August 2011

Neprilysin activity in cerebrospinal fluid is associated with dementia and amyloid-β42 levels in Lewy body disease.

J Alzheimers Dis 2010 ;22(3):933-8

Center of Neurology, Department of Neurodegeneration, Hertie Institute for Clinical Brain Research, University of Tuebingen, Tuebingen, Germany.

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http://dx.doi.org/10.3233/JAD-2010-101197DOI Listing
June 2011

BoneJ: Free and extensible bone image analysis in ImageJ.

Bone 2010 Dec 15;47(6):1076-9. Epub 2010 Sep 15.

Department of Bioengineering, Imperial College London, South Kensington, London SW7 2AZ, UK.

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http://dx.doi.org/10.1016/j.bone.2010.08.023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3193171PMC
December 2010

A high-level 3D visualization API for Java and ImageJ.

BMC Bioinformatics 2010 May 21;11:274. Epub 2010 May 21.

Department of Neurobiology and Genetics, Biocenter, University of Würzburg, Am Hubland, Würzburg, Germany.

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http://dx.doi.org/10.1186/1471-2105-11-274DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896381PMC
May 2010

Differential selection for B-raf and Ha-ras mutated liver tumors in mice with high and low susceptibility to hepatocarcinogenesis.

Mutat Res 2008 Feb 2;638(1-2):66-74. Epub 2007 Sep 2.

Institute of Pharmacology and Toxicology, Department of Toxicology, University of Tübingen, Wilhelmstr. 56, 72074 Tübingen, Germany.

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http://dx.doi.org/10.1016/j.mrfmmm.2007.08.015DOI Listing
February 2008

Nanoscaffold mediates hydrogen release and the reactivity of ammonia borane.

Angew Chem Int Ed Engl 2005 Jun;44(23):3578-82

Pacific Northwest National Laboratory, Richland, WA 99352, USA.

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http://dx.doi.org/10.1002/anie.200462602DOI Listing
June 2005