Benjamin R Kipp

Benjamin R Kipp

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Benjamin R Kipp

Benjamin R Kipp

Publications by authors named "Benjamin R Kipp"

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Clinicopathological, immunophenotypic and genetic studies of mediastinal paragangliomas.

Eur J Cardiothorac Surg 2019 Apr 16. Epub 2019 Apr 16.

Department of Laboratory Medicine and Pathology, Mayo Clinic Rochester, Rochester, MN, USA.

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http://dx.doi.org/10.1093/ejcts/ezz115DOI Listing
April 2019

Applying Standard Clinical Chemistry Assay Validation to Droplet Digital PCR Quantitative Liquid Biopsy Testing.

Clin Chem 2018 Dec 20;64(12):1732-1742. Epub 2018 Sep 20.

Department of Laboratory Medicine and Pathology, Division of Clinical Biochemistry and Immunology, Mayo Clinic, Rochester, MN;

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http://www.clinchem.org/lookup/doi/10.1373/clinchem.2018.291
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http://dx.doi.org/10.1373/clinchem.2018.291278DOI Listing
December 2018

Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumors.

J Mol Diagn 2018 07 19;20(4):495-511. Epub 2018 Jun 19.

Department of Laboratory Medicine and Pathology, Divisions of Laboratory Genetics and Experimental Pathology, Mayo Clinic, Rochester, Minnesota. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2018.03.007DOI Listing
July 2018

First-in-Human Phase I Study of the Tamoxifen Metabolite Z-Endoxifen in Women With Endocrine-Refractory Metastatic Breast Cancer.

J Clin Oncol 2017 Oct 30;35(30):3391-3400. Epub 2017 Aug 30.

Matthew P. Goetz, Vera J. Suman, Joel M. Reid, Don W. Northfelt, Michael A. Mahr, Andrew T. Ralya, Mary Kuffel, Sarah A. Buhrow, Stephanie L. Safgren, Renee M. McGovern, John Black, Travis Dockter, Tufia Haddad, Charles Erlichman, Alex A. Adjei, Dan Visscher, Benjamin R. Kipp, Minetta C. Liu, John R. Hawse, Matthew M. Ames, and James N. Ingle, Mayo Clinic, Rochester, MN; Zachary R. Chalmers and Garrett Frampton, Foundation Medicine, Cambridge, MA; and John R. Hawse, James H. Doroshow, Jerry M. Collins, and Howard Streicher, National Cancer Institute, Bethesda, MD.

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http://ascopubs.org/doi/10.1200/JCO.2017.73.3246
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http://dx.doi.org/10.1200/JCO.2017.73.3246DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5648176PMC
October 2017

Genomic rearrangements in sporadic lymphangioleiomyomatosis: an evolving genetic story.

Mod Pathol 2017 09 23;30(9):1223-1233. Epub 2017 Jun 23.

Departments of Pulmonary and Critical Care Medicine, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1038/modpathol.2017.52DOI Listing
September 2017

BRAF Mutations Define a Clinically Distinct Molecular Subtype of Metastatic Colorectal Cancer.

J Clin Oncol 2017 Aug 9;35(23):2624-2630. Epub 2017 May 9.

Jeremy C. Jones, Lindsay A. Renfro, Ben Y. Zhang, Pashtoon M. Kasi, Jesse S. Voss, Alexis D. Leal, Joleen M. Hubbard, Benjamin R. Kipp, Robert R. McWilliams, and Axel Grothey, Mayo Clinic, Rochester, MN; Humaid O. Al-Shamsi, Scott Kopetz, and Robert A. Wolff, The University of Texas MD Anderson Cancer Center, Houston, TX; and Alexa B. Schrock, Andrew Rankin, James Sun, Jeffrey Ross, and Siraj M. Ali, Foundation Medicine, Cambridge, MA.

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http://ascopubs.org/doi/10.1200/JCO.2016.71.4394
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http://dx.doi.org/10.1200/JCO.2016.71.4394DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5549454PMC
August 2017

Lack of Caudal-Type Homeobox Transcription Factor 2 Expression as a Prognostic Biomarker in Metastatic Colorectal Cancer.

Clin Colorectal Cancer 2017 06 17;16(2):124-128. Epub 2016 Sep 17.

Department of Oncology, Mayo Clinic, Rochester, MN. Electronic address:

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http://dx.doi.org/10.1016/j.clcc.2016.09.003DOI Listing
June 2017

Ciliated Muconodular Papillary Tumors of the Lung Can Occur in Western Patients and Show Mutations in BRAF and AKT1.

Am J Surg Pathol 2016 12;40(12):1631-1636

*Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN †Department of Pathology, Northwestern Medicine Central DuPage Hospital, Winfield, IL.

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http://dx.doi.org/10.1097/PAS.0000000000000707DOI Listing
December 2016

S768I Mutation in EGFR in Patients with Lung Cancer.

J Thorac Oncol 2016 10 20;11(10):1798-801. Epub 2016 May 20.

Department of Medical Oncology, Mayo Clinic, Rochester, Minnesota. Electronic address:

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http://dx.doi.org/10.1016/j.jtho.2016.05.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5035584PMC
October 2016

Molecular characterization of pulmonary sarcomatoid carcinoma: analysis of 33 cases.

Mod Pathol 2016 08 13;29(8):824-31. Epub 2016 May 13.

Division of Anatomic Pathology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1038/modpathol.2016.89DOI Listing
August 2016

FGFR1 and FGFR2 in fibrolamellar carcinoma.

Histopathology 2016 Apr 5;68(5):686-92. Epub 2015 Oct 5.

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1111/his.12799DOI Listing
April 2016

Hepatocellular Neoplasms Arising in Association With Androgen Use.

Am J Surg Pathol 2016 Apr;40(4):454-61

*Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN †Department of Pathology and Laboratory Medicine, UCLA, Los Angeles, CA ‡Largo Medical Center, Largo, FL.

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http://pdfs.journals.lww.com/ajsp/9000/00000/Hepatocellular_
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http://content.wkhealth.com/linkback/openurl?sid=WKPTLP:land
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http://dx.doi.org/10.1097/PAS.0000000000000576DOI Listing
April 2016

Combined "Infiltrating Astrocytoma/Pleomorphic Xanthoastrocytoma" Harboring IDH1 R132H and BRAF V600E Mutations.

Am J Surg Pathol 2016 Feb;40(2):279-84

Departments of *Experimental Pathology†Anatomic Pathology‡Molecular Anatomic Pathology, Mayo Clinic, Rochester, MN.

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http://dx.doi.org/10.1097/PAS.0000000000000515DOI Listing
February 2016

Somatic STK11 and concomitant STK11/KRAS mutational frequency in stage IV lung adenocarcinoma adrenal metastases.

J Thorac Oncol 2015 Mar;10(3):531-4

*Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; †Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota; ‡Division of Biomedical Statics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota; and §Center for Individualized Medicine, Mayo Clinic, Rochester, Minnesota.

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http://dx.doi.org/10.1097/JTO.0000000000000391DOI Listing
March 2015

Detection of circulating tumor cells in high-risk endometrial cancer.

Anticancer Res 2015 Feb;35(2):683-7

Division of Gynecologic Surgery, Mayo Clinic, Rochester, MN, U.S.A.

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February 2015

Characterization of endoscopic ultrasound fine-needle aspiration cytology by targeted next-generation sequencing and theranostic potential.

Clin Gastroenterol Hepatol 2015 Jan 24;13(1):37-41. Epub 2014 Oct 24.

Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota.

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http://dx.doi.org/10.1016/j.cgh.2014.10.017DOI Listing
January 2015

Biliary dysplasia in primary sclerosing cholangitis harbors cytogenetic abnormalities similar to cholangiocarcinoma.

Hum Pathol 2014 Sep 4;45(9):1797-804. Epub 2014 Jun 4.

Laboratory Medicine and Pathology, Mayo Clinic, Jacksonville, FL 32224.

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http://dx.doi.org/10.1016/j.humpath.2014.05.008DOI Listing
September 2014

PRKAR1A in the development of cardiac myxoma: a study of 110 cases including isolated and syndromic tumors.

Am J Surg Pathol 2014 Aug;38(8):1079-87

*Division of Anatomic Pathology, Mayo Clinic, Rochester, MN †Department of Laboratory Medicine, Geisinger Medical Center, Danville, PA ‡Department of Pathology, Dalhousie University, Halifax, NS, Canada.

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http://dx.doi.org/10.1097/PAS.0000000000000202DOI Listing
August 2014

Comparison of urine cytology and fluorescence in situ hybridization in upper urothelial tract samples.

Cancer Cytopathol 2014 Jun 6;122(6):459-67. Epub 2014 Mar 6.

Pathology and Laboratory Medicine Institute, Cleveland Clinic, Cleveland, Ohio.

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http://dx.doi.org/10.1002/cncy.21414DOI Listing
June 2014

Primary sclerosing cholangitis with equivocal cytology: fluorescence in situ hybridization and serum CA 19-9 predict risk of malignancy.

Cancer Cytopathol 2013 Dec 9;121(12):708-17. Epub 2013 Jul 9.

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, Minnesota.

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http://dx.doi.org/10.1002/cncy.21331DOI Listing
December 2013

Improving the accuracy of pancreatobiliary tract cytology with fluorescence in situ hybridization: a molecular test with proven clinical success.

Cancer Cytopathol 2013 Nov 30;121(11):610-9. Epub 2013 Apr 30.

Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine, Rochester, Minnesota.

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http://dx.doi.org/10.1002/cncy.21303DOI Listing
November 2013

Simultaneous colonic adenocarcinoma and medulloblastoma in a 12-year-old with biallelic deletions in PMS2.

J Pediatr 2013 Aug 10;163(2):601-3. Epub 2013 Apr 10.

Department of Pediatrics, Children's Center for Cancer and Blood Diseases, Children's Hospital of Los Angeles, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.

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http://dx.doi.org/10.1016/j.jpeds.2013.03.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3862975PMC
August 2013

Molecular profiling of cholangiocarcinoma shows potential for targeted therapy treatment decisions.

Hum Pathol 2013 Jul 4;44(7):1216-22. Epub 2013 Feb 4.

Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1016/j.humpath.2012.11.006DOI Listing
July 2013

Molecular diagnostics, personalized medicine, and the evolving role of the cytotechnologist: an institutional experience.

Acta Cytol 2012 24;56(6):678-85. Epub 2012 Nov 24.

Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine, Rochester, MN, USA.

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http://dx.doi.org/10.1159/000341169DOI Listing
February 2013

Isocitrate dehydrogenase 1 and 2 mutations in cholangiocarcinoma.

Hum Pathol 2012 Oct 12;43(10):1552-8. Epub 2012 Apr 12.

Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1016/j.humpath.2011.12.007DOI Listing
October 2012

Detection of lung cancer in bronchial brushing specimens by FISH.

Expert Rev Mol Diagn 2012 Sep;12(7):679-81

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA.

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http://www.tandfonline.com/doi/full/10.1586/erm.12.69
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http://dx.doi.org/10.1586/erm.12.69DOI Listing
September 2012

Primary sclerosing cholangitis patients with serial polysomy fluorescence in situ hybridization results are at increased risk of cholangiocarcinoma.

Am J Gastroenterol 2011 Nov 16;106(11):2023-8. Epub 2011 Aug 16.

Department of Laboratory Medicine, Mayo Clinic College of Medicine, Mayo Clinic and Foundation, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1038/ajg.2011.272DOI Listing
November 2011

Clinical diagnostic testing for the cytogenetic and molecular causes of male infertility: the Mayo Clinic experience.

J Assist Reprod Genet 2011 Nov 13;28(11):1091-8. Epub 2011 Sep 13.

Clinical Biochemical Genetics, Department of Laboratory Medicine and Pathology, Mayo Clinic College of Medicine, Rochester, MN 55902, USA.

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http://dx.doi.org/10.1007/s10815-011-9633-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3224174PMC
November 2011

Improving cellularity and quality of liquid-based cytology slides processed from pancreatobiliary tract brushings.

Diagn Cytopathol 2010 Sep;38(9):627-32

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.

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http://dx.doi.org/10.1002/dc.21255DOI Listing
September 2010

Comparison of p16INK4a and ProEx C immunostaining on cervical ThinPrep cytology and biopsy specimens.

Diagn Cytopathol 2010 Aug;38(8):564-72

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1002/dc.21251DOI Listing
August 2010

Fluorescence in situ hybridization testing algorithm improves lung cancer detection in bronchial brushing specimens.

Am J Respir Crit Care Med 2010 Mar 10;181(5):478-85. Epub 2009 Dec 10.

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, Minnesota, USA.

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http://www.atsjournals.org/doi/abs/10.1164/rccm.200907-1121O
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http://dx.doi.org/10.1164/rccm.200907-1121OCDOI Listing
March 2010

A prospective pilot study of circulating endothelial cells as a potential new biomarker in portal hypertension.

Liver Int 2010 Feb 19;30(2):191-7. Epub 2009 Oct 19.

Gastroenterology Research Unit, Department of Physiology, Advanced Liver Disease Study Group, Fiterman Center for Digestive Diseases, Mayo Clinic, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1111/j.1478-3231.2009.02132.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2868113PMC
February 2010

Comparison of EUS-guided FNA and Trucut biopsy for diagnosing and staging abdominal and mediastinal neoplasms.

Diagn Cytopathol 2009 Aug;37(8):549-56

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55901, USA.

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http://dx.doi.org/10.1002/dc.21042DOI Listing
August 2009

Comparison of fluorescence in situ hybridization, hybrid capture 2 and polymerase chain reaction for the detection of high-risk human papillomavirus in cervical cytology specimens.

Anal Quant Cytol Histol 2009 Aug;31(4):208-16

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, Minnesota 55905, USA.

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August 2009

Changes in specimen preparation method may impact urine cytologic evaluation.

Am J Clin Pathol 2008 Sep;130(3):428-33

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1309/VP1XQ5GPQ687W1HUDOI Listing
September 2008

Bladder cancer detection using FISH (UroVysion assay).

Adv Anat Pathol 2008 Sep;15(5):279-86

Department of Laboratory Medicine and Pathology, Division of Laboratory Genetics, Mayo Clinic and Foundation, Rochester, MN 5905, USA.

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https://insights.ovid.com/crossref?an=00125480-200809000-000
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http://dx.doi.org/10.1097/PAP.0b013e3181832320DOI Listing
September 2008

A study of the reproducibility of a fluorescence in situ hybridization bladder cancer detection assay.

Anal Quant Cytol Histol 2008 Jun;30(3):145-51

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, Minnesota 55905, USA.

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June 2008

Assessing the value of reflex fluorescence in situ hybridization testing in the diagnosis of bladder cancer when routine urine cytological examination is equivocal.

J Urol 2008 Apr 4;179(4):1296-301; discussion 1301. Epub 2008 Mar 4.

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1016/j.juro.2007.11.082DOI Listing
April 2008

Fluorescence in situ hybridization in diagnostic cytology.

Hum Pathol 2007 Aug;38(8):1137-44

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1016/j.humpath.2007.04.015DOI Listing
August 2007

An evaluation of ThinPrep UroCyte filters for the preparation of slides for fluorescence in situ hybridization.

Diagn Cytopathol 2006 Jul;34(7):479-84

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, Minnesota 55905, USA.

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http://doi.wiley.com/10.1002/dc.20488
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http://dx.doi.org/10.1002/dc.20488DOI Listing
July 2006

Analysis of polyomavirus-infected renal transplant recipients' urine specimens: correlation of routine urine cytology, fluorescence in situ hybridization, and digital image analysis.

Am J Clin Pathol 2005 Dec;124(6):854-61

Department of Laboratory Medicine and Pathology, Mayo Clinic and Foundation, Rochester, MN 55905, USA.

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December 2005

A systematic approach to identifying urothelial cells likely to be polysomic by fluorescence in situ hybridization.

Anal Quant Cytol Histol 2005 Dec;27(6):317-22

Molecular Cytology and Imaging Laboratory, Department of Laboratory Medicine and Pathology, Mayo Clinic Foundation, Roschester, Minnesota, USA.

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December 2005