Benjamin D Pope

Benjamin D Pope

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Benjamin D Pope

Benjamin D Pope

Publications by authors named "Benjamin D Pope"

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Synchronized stimulation and continuous insulin sensing in a microfluidic human Islet on a Chip designed for scalable manufacturing.

Lab Chip 2019 Sep;19(18):2993-3010

Disease Biophysics Group, Wyss Institute for Biologically Inspired Engineering, Harvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Pierce Hall, 29 Oxford Street, Cambridge, MA 02138, USA.

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http://dx.doi.org/10.1039/c9lc00253gDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814249PMC
September 2019

Microenvironmental Control of Adipocyte Fate and Function.

Trends Cell Biol 2016 10 4;26(10):745-755. Epub 2016 Jun 4.

Harvard Department of Stem Cell and Regenerative Biology, Harvard Stem Cell Institute, Harvard University, Cambridge, MA, USA; Center for Regenerative Medicine, Massachusetts General Hospital, Boston, MA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.tcb.2016.05.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6788628PMC
October 2016

Many paths lead chromatin to the nuclear periphery.

Bioessays 2015 Aug 8;37(8):862-6. Epub 2015 Jun 8.

Department of Biological Science, Florida State University, Tallahassee, FL, USA.

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http://dx.doi.org/10.1002/bies.201500034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4511709PMC
August 2015

A comparative encyclopedia of DNA elements in the mouse genome.

Authors:
Feng Yue Yong Cheng Alessandra Breschi Jeff Vierstra Weisheng Wu Tyrone Ryba Richard Sandstrom Zhihai Ma Carrie Davis Benjamin D Pope Yin Shen Dmitri D Pervouchine Sarah Djebali Robert E Thurman Rajinder Kaul Eric Rynes Anthony Kirilusha Georgi K Marinov Brian A Williams Diane Trout Henry Amrhein Katherine Fisher-Aylor Igor Antoshechkin Gilberto DeSalvo Lei-Hoon See Meagan Fastuca Jorg Drenkow Chris Zaleski Alex Dobin Pablo Prieto Julien Lagarde Giovanni Bussotti Andrea Tanzer Olgert Denas Kanwei Li M A Bender Miaohua Zhang Rachel Byron Mark T Groudine David McCleary Long Pham Zhen Ye Samantha Kuan Lee Edsall Yi-Chieh Wu Matthew D Rasmussen Mukul S Bansal Manolis Kellis Cheryl A Keller Christapher S Morrissey Tejaswini Mishra Deepti Jain Nergiz Dogan Robert S Harris Philip Cayting Trupti Kawli Alan P Boyle Ghia Euskirchen Anshul Kundaje Shin Lin Yiing Lin Camden Jansen Venkat S Malladi Melissa S Cline Drew T Erickson Vanessa M Kirkup Katrina Learned Cricket A Sloan Kate R Rosenbloom Beatriz Lacerda de Sousa Kathryn Beal Miguel Pignatelli Paul Flicek Jin Lian Tamer Kahveci Dongwon Lee W James Kent Miguel Ramalho Santos Javier Herrero Cedric Notredame Audra Johnson Shinny Vong Kristen Lee Daniel Bates Fidencio Neri Morgan Diegel Theresa Canfield Peter J Sabo Matthew S Wilken Thomas A Reh Erika Giste Anthony Shafer Tanya Kutyavin Eric Haugen Douglas Dunn Alex P Reynolds Shane Neph Richard Humbert R Scott Hansen Marella De Bruijn Licia Selleri Alexander Rudensky Steven Josefowicz Robert Samstein Evan E Eichler Stuart H Orkin Dana Levasseur Thalia Papayannopoulou Kai-Hsin Chang Arthur Skoultchi Srikanta Gosh Christine Disteche Piper Treuting Yanli Wang Mitchell J Weiss Gerd A Blobel Xiaoyi Cao Sheng Zhong Ting Wang Peter J Good Rebecca F Lowdon Leslie B Adams Xiao-Qiao Zhou Michael J Pazin Elise A Feingold Barbara Wold James Taylor Ali Mortazavi Sherman M Weissman John A Stamatoyannopoulos Michael P Snyder Roderic Guigo Thomas R Gingeras David M Gilbert Ross C Hardison Michael A Beer Bing Ren

Nature 2014 Nov;515(7527):355-64

Ludwig Institute for Cancer Research and University of California, San Diego School of Medicine, 9500 Gilman Drive, La Jolla, California 92093, USA.

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http://dx.doi.org/10.1038/nature13992DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4266106PMC
November 2014

Genetics: Up and down in Down's syndrome.

Nature 2014 Apr;508(7496):323-4

Department of Biological Science, Florida State University, Tallahassee, Florida 32306, USA.

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http://dx.doi.org/10.1038/508323aDOI Listing
April 2014

The replication domain model: regulating replicon firing in the context of large-scale chromosome architecture.

J Mol Biol 2013 Nov 17;425(23):4690-5. Epub 2013 Apr 17.

Department of Biological Science, Florida State University, 319 Stadium Drive, Tallahassee, FL 32306-4295, USA.

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http://dx.doi.org/10.1016/j.jmb.2013.04.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3775993PMC
November 2013

SnapShot: Replication timing.

Cell 2013 Mar;152(6):1390-1390.e1

Department of Biological Science, Florida State University, Tallahassee, FL 32306, USA.

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http://dx.doi.org/10.1016/j.cell.2013.02.038DOI Listing
March 2013

Abnormal developmental control of replication-timing domains in pediatric acute lymphoblastic leukemia.

Genome Res 2012 Oct 24;22(10):1833-44. Epub 2012 May 24.

Department of Biological Science, Florida State University, Tallahassee, Florida 32306, USA.

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http://dx.doi.org/10.1101/gr.138511.112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3460179PMC
October 2012

Genome-scale analysis of replication timing: from bench to bioinformatics.

Nat Protoc 2011 Jun 2;6(6):870-95. Epub 2011 Jun 2.

Department of Biological Science, Florida State University, Tallahassee, USA.

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http://dx.doi.org/10.1038/nprot.2011.328DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111951PMC
June 2011

Domain-wide regulation of DNA replication timing during mammalian development.

Chromosome Res 2010 Jan;18(1):127-36

Department of Biological Science, Florida State University, Tallahassee, FL, 32306, USA.

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http://dx.doi.org/10.1007/s10577-009-9100-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2827620PMC
January 2010