Publications by authors named "Benjamin A Pinsky"

100Publications

Human B Cell Clonal Expansion and Convergent Antibody Responses to SARS-CoV-2.

Cell Host Microbe 2020 10 3;28(4):516-525.e5. Epub 2020 Sep 3.

Department of Pathology, Stanford University, Stanford, CA 94305, USA; Sean N. Parker Center for Allergy and Asthma Research, Stanford University School of Medicine, Stanford, CA, 94305, USA. Electronic address:

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http://dx.doi.org/10.1016/j.chom.2020.09.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470783PMC
October 2020

Carving out a niche for SARS-CoV-2 plasma RNA testing.

Clin Infect Dis 2020 Sep 17. Epub 2020 Sep 17.

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.

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http://dx.doi.org/10.1093/cid/ciaa1412DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7543305PMC
September 2020

Measure what matters: Counts of hospitalized patients are a better metric for health system capacity planning for a reopening.

J Am Med Inform Assoc 2020 07;27(7):1026-1131

Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, California, USA.

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http://dx.doi.org/10.1093/jamia/ocaa076DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7337779PMC
July 2020

A predictive tool for identification of SARS-CoV-2 PCR-negative emergency department patients using routine test results.

J Clin Virol 2020 08 10;129:104502. Epub 2020 Jun 10.

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA; Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, CA, USA; Clinical Microbiology Laboratory, Stanford University Medical Center, Palo Alto, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jcv.2020.104502DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7286235PMC
August 2020

Comparison of a laboratory-developed test targeting the envelope gene with three nucleic acid amplification tests for detection of SARS-CoV-2.

J Clin Virol 2020 08 8;129:104427. Epub 2020 May 8.

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA; Clinical Virology Laboratory, Stanford Health Care, Stanford, CA, USA; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jcv.2020.104427DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7207111PMC
August 2020

Persistent detection of SARS-CoV-2 RNA in patients and healthcare workers with COVID-19.

J Clin Virol 2020 08 30;129:104477. Epub 2020 May 30.

Department of Medicine (Biomedical Informatics), School of Medicine, Stanford, CA, United States.

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http://dx.doi.org/10.1016/j.jcv.2020.104477DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7260561PMC
August 2020

Utilization, Yield, and Accuracy of the FilmArray Meningitis/Encephalitis Panel with Diagnostic Stewardship and Testing Algorithm.

J Clin Microbiol 2020 Aug 24;58(9). Epub 2020 Aug 24.

Department of Pathology, Stanford University School of Medicine, Stanford, California, USA

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http://dx.doi.org/10.1128/JCM.00311-20DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7448656PMC
August 2020

Is Merkel Cell Carcinoma of Lymph Node Actually Metastatic Cutaneous Merkel Cell Carcinoma?

Am J Clin Pathol 2020 08;154(3):369-380

Department of Pathology, Stanford University School of Medicine, Stanford, CA.

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http://dx.doi.org/10.1093/ajcp/aqaa051DOI Listing
August 2020

Five-minute point-of-care testing for SARS-CoV-2: Not there yet.

J Clin Virol 2020 07 1;128:104410. Epub 2020 May 1.

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA; Clinical Virology Laboratory, Stanford Health Care, Stanford, CA, USA; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jcv.2020.104410DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7194071PMC
July 2020

Comparison of the Panther Fusion and a laboratory-developed test targeting the envelope gene for detection of SARS-CoV-2.

J Clin Virol 2020 06 24;127:104383. Epub 2020 Apr 24.

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA; Clinical Virology Laboratory, Stanford Health Care, Stanford, CA, USA; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jcv.2020.104383DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7195328PMC
June 2020

Sample Pooling as a Strategy to Detect Community Transmission of SARS-CoV-2.

JAMA 2020 May;323(19):1967-1969

Department of Pathology, Stanford University School of Medicine, Stanford, California.

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http://dx.doi.org/10.1001/jama.2020.5445DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7136853PMC
May 2020

Antibody-Dependent Enhancement of Severe Disease Is Mediated by Serum Viral Load in Pediatric Dengue Virus Infections.

J Infect Dis 2020 May;221(11):1846-1854

Division of Infectious Diseases and Vaccinology, School of Public Health, University of California Berkeley, Berkeley, California, USA.

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http://dx.doi.org/10.1093/infdis/jiz618DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7213574PMC
May 2020

Reply to Muller and Chaudhury.

Clin Infect Dis 2020 Mar 4. Epub 2020 Mar 4.

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.

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http://dx.doi.org/10.1093/cid/ciaa220DOI Listing
March 2020

Human papillomavirus cytopathic effect in the urine of a 76-year-old man.

Diagn Cytopathol 2020 May 11;48(5):489-490. Epub 2020 Feb 11.

Department of Pathology, University of Virginia, Charlottesville, Virginia.

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http://dx.doi.org/10.1002/dc.24384DOI Listing
May 2020

Real-time RT-PCR for the detection and quantitation of Oropouche virus.

Diagn Microbiol Infect Dis 2020 Jan 9;96(1):114894. Epub 2019 Sep 9.

Emory University, Department of Medicine, Division of Infectious Diseases, Atlanta, GA, USA; Rollins School of Public Health, Department of Global Health, Atlanta, GA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.diagmicrobio.2019.114894DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6906250PMC
January 2020

Comparison of Transcription-Mediated Amplification and Real-Time PCR Assays for Hepatitis B Virus DNA Quantitation in Serum.

J Appl Lab Med 2019 11 6;4(3):383-390. Epub 2019 Jun 6.

Department of Pathology, Stanford University School of Medicine, Stanford, CA;

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http://dx.doi.org/10.1373/jalm.2019.029058DOI Listing
November 2019

Prospective Evaluation of the Vela Diagnostics Next-Generation Sequencing Platform for HIV-1 Genotypic Resistance Testing.

J Mol Diagn 2019 11 2;21(6):961-970. Epub 2019 Aug 2.

Department of Pathology, Stanford University School of Medicine, Stanford, California; Clinical Virology Laboratory, Stanford Health Care, Stanford, California; Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2019.06.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7152740PMC
November 2019

Molecular profiling of clear cell adenocarcinoma of the urinary tract.

Virchows Arch 2019 Dec 2;475(6):727-734. Epub 2019 Aug 2.

Department of Pathology, Stanford University School of Medicine, Stanford, CA, 94305, USA.

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http://dx.doi.org/10.1007/s00428-019-02634-5DOI Listing
December 2019

Community-based self-collected human papillomavirus screening in rural Zimbabwe.

BMC Public Health 2019 May 29;19(Suppl 1):603. Epub 2019 May 29.

Chidamoyo Christian Hospital, P.O. Box 330, Karoi, Zimbabwe.

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http://dx.doi.org/10.1186/s12889-019-6810-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6538544PMC
May 2019

Unbiased Pathogen Detection and Host Gene Profiling for Conjunctivitis.

Ophthalmology 2019 08 4;126(8):1090-1094. Epub 2019 Apr 4.

Francis I. Proctor Foundation, San Francisco, California; Department of Ophthalmology, University of California, San Francisco, California. Electronic address:

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http://dx.doi.org/10.1016/j.ophtha.2019.03.039DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6646074PMC
August 2019

hrHPV prevalence and type distribution in rural Zimbabwe: A community-based self-collection study using near-point-of-care GeneXpert HPV testing.

Int J Infect Dis 2019 May 23;82:21-29. Epub 2019 Feb 23.

Stanford University School of Medicine, Department of Pathology, Stanford, CA, USA; Stanford University School of Medicine, Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ijid.2019.02.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6538272PMC
May 2019

Evaluation of the Aptima HCV Quant Dx Assay Using Serum and Dried Blood Spots.

J Clin Microbiol 2019 04 28;57(4). Epub 2019 Mar 28.

Department of Pathology, Stanford University School of Medicine, Stanford, California, USA

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http://dx.doi.org/10.1128/JCM.00030-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6440767PMC
April 2019

A 20-Gene Set Predictive of Progression to Severe Dengue.

Cell Rep 2019 01;26(5):1104-1111.e4

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University, Stanford, CA, USA; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2019.01.033DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6352713PMC
January 2019

Dual-target, real-time PCR for the diagnosis of intraocular infections.

Br J Ophthalmol 2019 04 12;103(4):569-572. Epub 2019 Jan 12.

F.I. Proctor Foundation, University of California San Francisco, San Francisco, California, USA.

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http://dx.doi.org/10.1136/bjophthalmol-2018-313064DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6691874PMC
April 2019

Deep sequencing prompts the modification of a real-time RT-PCR for the serotype-specific detection of polioviruses.

J Virol Methods 2019 02 14;264:38-43. Epub 2018 Nov 14.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, CA, United States; Department of Pathology, Stanford University School of Medicine, Stanford, CA, United States. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S01660934183036
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http://dx.doi.org/10.1016/j.jviromet.2018.11.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6320388PMC
February 2019

Evaluating for Human Herpesvirus 6 in the Liver Explants of Children With Liver Failure of Unknown Etiology.

J Infect Dis 2019 07;220(3):361-369

Department of Surgery, Division of Abdominal Transplantation and Stanford Immunology, Stanford University Medical Center, California.

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https://academic.oup.com/jid/advance-article/doi/10.1093/inf
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http://dx.doi.org/10.1093/infdis/jiy644DOI Listing
July 2019

Native kidney cytomegalovirus nephritis and cytomegalovirus prostatitis in a kidney transplant recipient.

Transpl Infect Dis 2019 Feb 28;21(1):e12998. Epub 2018 Sep 28.

Department of Medicine, Division of Nephrology, Stanford University School of Medicine, Stanford, California.

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http://doi.wiley.com/10.1111/tid.12998
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http://dx.doi.org/10.1111/tid.12998DOI Listing
February 2019

Yellow Fever Virus: Diagnostics for a Persistent Arboviral Threat.

J Clin Microbiol 2018 10 25;56(10). Epub 2018 Sep 25.

Department of Pathology, Stanford University School of Medicine, Stanford, California, USA.

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http://dx.doi.org/10.1128/JCM.00827-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6156298PMC
October 2018

High human herpesvirus 6 viral load in pediatric allogeneic hematopoietic stem cell transplant patients is associated with detection in end organs and high mortality.

Pediatr Transplant 2018 03 27;22(2). Epub 2017 Nov 27.

Division of Stem Cell Transplantation and Regenerative Medicine, Department of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA.

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http://dx.doi.org/10.1111/petr.13084DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5820136PMC
March 2018

Closing the Brief Case: Confirmed Positive HIV-1 Serological Screening but Undetectable RNA Virus Load in a Pregnant Woman.

J Clin Microbiol 2017 12;55(12):3566-3567

Department of Pathology, Stanford University School of Medicine, Stanford, California, USA

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http://dx.doi.org/10.1128/JCM.00619-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5703824PMC
December 2017

The Brief Case: Confirmed Positive HIV-1 Serologic Screening but Undetectable RNA Virus Load in a Pregnant Woman.

J Clin Microbiol 2017 12;55(12):3316-3320

Department of Pathology, Stanford University School of Medicine, Stanford, California, USA

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http://dx.doi.org/10.1128/JCM.00618-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5703796PMC
December 2017

Real-time RT-PCR for Mayaro virus detection in plasma and urine.

J Clin Virol 2018 01 21;98:1-4. Epub 2017 Nov 21.

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA; Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, USA.

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http://dx.doi.org/10.1016/j.jcv.2017.11.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5742299PMC
January 2018

Zika and Chikungunya virus detection in naturally infected Aedes aegypti in Ecuador.

Acta Trop 2018 Jan 2;177:74-80. Epub 2017 Oct 2.

Instituto Nacional de Investigación en Salud Pública, Centro de Investigación y Referencia Nacional en Vectores, Quito, Ecuador.

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http://dx.doi.org/10.1016/j.actatropica.2017.09.029DOI Listing
January 2018

The Human Virome: Implications for Clinical Practice in Transplantation Medicine.

J Clin Microbiol 2017 10 19;55(10):2884-2893. Epub 2017 Jul 19.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, USA.

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http://dx.doi.org/10.1128/JCM.00489-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5625374PMC
October 2017

Delayed Diagnosis of Tuberculous Meningitis Misdiagnosed as Herpes Simplex Virus-1 Encephalitis With the FilmArray Syndromic Polymerase Chain Reaction Panel.

Open Forum Infect Dis 2017 7;4(1):ofw245. Epub 2016 Dec 7.

Division of Infectious Diseases and Geographic Medicine, Department of Medicine.

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http://dx.doi.org/10.1093/ofid/ofw245DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5437853PMC
December 2016

Metagenomic DNA Sequencing for the Diagnosis of Intraocular Infections.

Ophthalmology 2017 08 16;124(8):1247-1248. Epub 2017 May 16.

Department of Biochemistry and Biophysics, University of California, San Francisco, California; Chan Zuckerberg Biohub, San Francisco, California. Electronic address:

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http://dx.doi.org/10.1016/j.ophtha.2017.03.045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5533302PMC
August 2017

Stability of Zika virus in urine: Specimen processing considerations and implications for the detection of RNA targets in urine.

J Virol Methods 2017 10 1;248:66-70. Epub 2017 May 1.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, CA, USA; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA; Clinical Virology Laboratory, Stanford Health Care, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jviromet.2017.04.018DOI Listing
October 2017

Pericardial Effusion Following Hematopoietic Cell Transplantation in Children and Young Adults Is Associated with Increased Risk of Mortality.

Biol Blood Marrow Transplant 2017 Jul 5;23(7):1165-1169. Epub 2017 Apr 5.

Department of Pediatrics, Division of Stem Cell Transplant and Regenerative Medicine, Stanford University School of Medicine, Stanford, California. Electronic address:

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http://dx.doi.org/10.1016/j.bbmt.2017.03.028DOI Listing
July 2017

Current State of PCR-Based Epstein-Barr Virus DNA Testing for Nasopharyngeal Cancer.

J Natl Cancer Inst 2017 04;109(4)

Cancer Diagnosis Program, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.

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http://dx.doi.org/10.1093/jnci/djx007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6279258PMC
April 2017

Diagnosis of Zika virus infection on a nanotechnology platform.

Nat Med 2017 May 6;23(5):548-550. Epub 2017 Mar 6.

Department of Chemistry, Stanford University, Stanford, California, USA.

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http://dx.doi.org/10.1038/nm.4302DOI Listing
May 2017

Calibration of BK Virus Nucleic Acid Amplification Testing to the 1st WHO International Standard for BK Virus.

J Clin Microbiol 2017 03 4;55(3):923-930. Epub 2017 Jan 4.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, USA

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http://dx.doi.org/10.1128/JCM.02315-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5328461PMC
March 2017

Current and future molecular diagnostics for ocular infectious diseases.

Curr Opin Ophthalmol 2016 Nov;27(6):561-567

aF.I. Proctor Foundation bDepartment of Ophthalmology, University of California, San Francisco cDepartment of Pathology dDivision of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California, USA.

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http://dx.doi.org/10.1097/ICU.0000000000000311DOI Listing
November 2016

Molecular diagnostics for human leptospirosis.

Curr Opin Infect Dis 2016 10;29(5):440-5

aDepartment of Medicine, Division of Infectious Diseases and Geographic Medicine bDepartment of Pathology, Stanford University School of Medicine, Stanford, California, USA.

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http://dx.doi.org/10.1097/QCO.0000000000000295DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5127924PMC
October 2016

Evaluation of the Aptima HIV-1 Quant Dx Assay Using Plasma and Dried Blood Spots.

J Clin Microbiol 2016 10 17;54(10):2597-601. Epub 2016 Aug 17.

Department of Pathology, Stanford University School of Medicine, Stanford, California, USA Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, USA

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5035416PMC
http://dx.doi.org/10.1128/JCM.01569-16DOI Listing
October 2016

Zika Virus and Chikungunya Virus CoInfections: A Series of Three Cases from a Single Center in Ecuador.

Am J Trop Med Hyg 2016 Oct 11;95(4):894-896. Epub 2016 Jul 11.

Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California. Department of Pathology, Stanford University School of Medicine, Stanford, California.

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http://dx.doi.org/10.4269/ajtmh.16-0323DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5062796PMC
October 2016

Clinical characteristics and outcomes of pediatric patients with CMV DNA detection in bronchoalveolar lavage fluid.

Pediatr Pulmonol 2017 01 9;52(1):112-118. Epub 2016 Jun 9.

Department of Pediatrics, Infectious Disease, Stanford University School of Medicine, Palo Alto, California.

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http://dx.doi.org/10.1002/ppul.23494DOI Listing
January 2017

Clinical evaluation of a single-reaction real-time RT-PCR for pan-dengue and chikungunya virus detection.

J Clin Virol 2016 May 27;78:57-61. Epub 2016 Feb 27.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, CA, USA; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jcv.2016.01.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836994PMC
May 2016

Homotypic Dengue Virus Reinfections in Nicaraguan Children.

J Infect Dis 2016 10 16;214(7):986-93. Epub 2016 Mar 16.

Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley.

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http://dx.doi.org/10.1093/infdis/jiw099DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5021223PMC
October 2016

Zika Virus: Diagnostics for an Emerging Pandemic Threat.

J Clin Microbiol 2016 Apr 17;54(4):860-7. Epub 2016 Feb 17.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, USA Department of Pathology, Stanford University School of Medicine, Stanford, California, USA

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http://dx.doi.org/10.1128/JCM.00279-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4809954PMC
April 2016

Molecular and Culture-Based Bronchoalveolar Lavage Fluid Testing for the Diagnosis of Cytomegalovirus Pneumonitis.

Open Forum Infect Dis 2016 Jan 10;3(1):ofv212. Epub 2016 Feb 10.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine; Department of Pathology, Stanford University School of Medicine, Stanford, California.

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https://academic.oup.com/ofid/article-lookup/doi/10.1093/ofi
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http://dx.doi.org/10.1093/ofid/ofv212DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4752011PMC
January 2016

Next-Generation Sequencing for Infectious Disease Diagnosis and Management: A Report of the Association for Molecular Pathology.

J Mol Diagn 2015 Nov 30;17(6):623-34. Epub 2015 Sep 30.

Association for Molecular Pathology Next-Generation Sequencing in Infectious Disease Work Group, Bethesda, Maryland; Department of Pathology, Stanford University School of Medicine, Stanford, California; Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2015.07.004DOI Listing
November 2015

Molecular Testing for Plasmodium falciparum by Use of Serum or Plasma and Comparison with Microscopy and Rapid Diagnostic Testing in Febrile Nigerian Patients.

J Clin Microbiol 2015 Nov 9;53(11):3596-600. Epub 2015 Sep 9.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, USA Department of Pathology, Stanford University School of Medicine, Stanford, California, USA

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http://dx.doi.org/10.1128/JCM.01876-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4609704PMC
November 2015

Cytomegalovirus load at treatment initiation is predictive of time to resolution of viremia and duration of therapy in hematopoietic cell transplant recipients.

J Clin Virol 2015 Aug 10;69:179-83. Epub 2015 Jun 10.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, CA, USA; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jcv.2015.06.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4828337PMC
August 2015

Limited Variation in BK Virus T-Cell Epitopes Revealed by Next-Generation Sequencing.

J Clin Microbiol 2015 Oct 22;53(10):3226-33. Epub 2015 Jul 22.

Department of Pathology, Stanford University School of Medicine, Stanford, California, USA Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, USA

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http://dx.doi.org/10.1128/JCM.01385-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572525PMC
October 2015

Reverse-Transcriptase PCR Detection of Leptospira: Absence of Agreement with Single-Specimen Microscopic Agglutination Testing.

PLoS One 2015 15;10(7):e0132988. Epub 2015 Jul 15.

Department of Medicine, Division of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, California, United States of America; Department of Pathology, Stanford University School of Medicine, Stanford, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0132988PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4503744PMC
May 2016

Molecular Detection of Leptospira in Two Returned Travelers: Higher Bacterial Load in Cerebrospinal Fluid Versus Serum or Plasma.

Am J Trop Med Hyg 2015 Aug 1;93(2):238-40. Epub 2015 Jun 1.

Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California; Division of Infectious Diseases, Sequoia Hospital, Redwood City, California; Department of Medicine, Stanford University School of Medicine, Stanford, California; Department of Pathology, Stanford University School of Medicine, Stanford, California.

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http://dx.doi.org/10.4269/ajtmh.15-0174DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4530740PMC
August 2015