Benedikt M Kessler

Benedikt M Kessler

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Benedikt M Kessler

Publications by authors named "Benedikt M Kessler"

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BMP signaling inhibition in secondary cells remodels the seminal proteome and self and rival ejaculate functions.

Proc Natl Acad Sci U S A 2019 Dec 18;116(49):24719-24728. Epub 2019 Nov 18.

Edward Grey Institute, Department of Zoology, University of Oxford, OX1 3PS Oxford, United Kingdom.

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http://dx.doi.org/10.1073/pnas.1914491116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6900634PMC
December 2019

Proteomics analysis of the matrisome from MC38 experimental mouse liver metastases.

Am J Physiol Gastrointest Liver Physiol 2019 Nov 23;317(5):G625-G639. Epub 2019 Sep 23.

Cancer Research United Kingdom/Medical Research Council Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Oxford, United Kingdom.

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http://dx.doi.org/10.1152/ajpgi.00014.2019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6879896PMC
November 2019

Regulation of the endosomal SNX27-retromer by OTULIN.

Nat Commun 2019 09 20;10(1):4320. Epub 2019 Sep 20.

Research Unit Cellular Signal Integration, Institute of Molecular Toxicology and Pharmacology, Helmholtz Zentrum München, Ingolstaedter Landstrasse 1, 85764, Neuherberg, Germany.

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http://dx.doi.org/10.1038/s41467-019-12309-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6754446PMC
September 2019

A Novel Role for Triglyceride Metabolism in Foxp3 Expression.

Front Immunol 2019 13;10:1860. Epub 2019 Aug 13.

Nuffield Department of Medicine, Target Discovery Institute, University of Oxford, Oxford, United Kingdom.

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http://dx.doi.org/10.3389/fimmu.2019.01860DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6701200PMC
August 2019

Improved profiling of polyamines using two-dimensional gas chromatography mass spectrometry.

Talanta 2019 Jul 18;199:184-188. Epub 2019 Feb 18.

TDI Mass Spectrometry Laboratory, Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7FZ, UK. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00399140193020
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http://dx.doi.org/10.1016/j.talanta.2019.02.062DOI Listing
July 2019

Ataxin-3 Links NOD2 and TLR2 Mediated Innate Immune Sensing and Metabolism in Myeloid Cells.

Front Immunol 2019 19;10:1495. Epub 2019 Jul 19.

MRC Human Immunology Unit, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, United Kingdom.

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http://dx.doi.org/10.3389/fimmu.2019.01495DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659470PMC
July 2019

Capturing the dynamics of genome replication on individual ultra-long nanopore sequence reads.

Nat Methods 2019 05 22;16(5):429-436. Epub 2019 Apr 22.

Sir William Dunn School of Pathology, University of Oxford, Oxford, UK.

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http://dx.doi.org/10.1038/s41592-019-0394-yDOI Listing
May 2019

From herbal small RNAs to one medicine.

Sci China Life Sci 2019 03 1;62(3):285-287. Epub 2019 Mar 1.

State Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, CAMS-Oxford Institute, Chinese Academy of Medical Sciences, Department of Biochemistry, Peking Union Medical College, Beijing, 100005, China.

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http://dx.doi.org/10.1007/s11427-019-9513-yDOI Listing
March 2019

Deacetylation Inhibition Reverses PABPN1-Dependent Muscle Wasting.

iScience 2019 Feb 22;12:318-332. Epub 2019 Jan 22.

Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.isci.2019.01.024DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6370712PMC
February 2019

UFLC-Derived CSF Extracellular Vesicle Origin and Proteome.

Proteomics 2018 12 10;18(24):e1800257. Epub 2018 Dec 10.

Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom.

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http://doi.wiley.com/10.1002/pmic.201800257
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http://dx.doi.org/10.1002/pmic.201800257DOI Listing
December 2018

The deubiquitylating enzyme UCHL3 regulates Ku80 retention at sites of DNA damage.

Sci Rep 2018 12 17;8(1):17891. Epub 2018 Dec 17.

Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, United Kingdom.

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http://dx.doi.org/10.1038/s41598-018-36235-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6297141PMC
December 2018

A variant NuRD complex containing PWWP2A/B excludes MBD2/3 to regulate transcription at active genes.

Nat Commun 2018 09 18;9(1):3798. Epub 2018 Sep 18.

Developmental Epigenetics, Department of Biochemistry, University of Oxford, Oxford, OX1 3QU, United Kingdom.

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http://dx.doi.org/10.1038/s41467-018-06235-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6143588PMC
September 2018

Tetrahydrobiopterin modulates ubiquitin conjugation to UBC13/UBE2N and proteasome activity by S-nitrosation.

Sci Rep 2018 09 25;8(1):14310. Epub 2018 Sep 25.

BHF Centre of Research Excellence, Division of Cardiovascular Medicine, Radcliffe Department of Medicine, John Radcliffe Hospital, University of Oxford, Oxford, OX3 9DU, UK.

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http://www.nature.com/articles/s41598-018-32481-4
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http://dx.doi.org/10.1038/s41598-018-32481-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6156325PMC
September 2018

β-TrCP- and Casein Kinase II-Mediated Degradation of Cyclin F Controls Timely Mitotic Progression.

Cell Rep 2018 09;24(13):3404-3412

Cancer Research UK and Medical Research Council Institute for Radiation Oncology, Department of Oncology, University of Oxford, Old Road Campus Research Building, Roosevelt Drive, Oxford OX3 7DQ, UK. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2018.08.076DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6172692PMC
September 2018

Development and validation of response markers to predict survival and pleurodesis success in patients with malignant pleural effusion (PROMISE): a multicohort analysis.

Lancet Oncol 2018 07 13;19(7):930-939. Epub 2018 Jun 13.

Oxford Centre for Respiratory Medicine, Churchill Hospital, Oxford University Hospitals NHS Foundation Trust, Oxford, UK; Laboratory of Pleural and Lung Cancer Translational Research, Nuffield Department of Medicine, University of Oxford, Oxford, UK; Oxford Respiratory Trials Unit, Nuffield Department of Medicine, University of Oxford, Oxford, UK; National Institute for Health Research Oxford Biomedical Research Centre, University of Oxford, Oxford, UK.

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http://dx.doi.org/10.1016/S1470-2045(18)30294-8DOI Listing
July 2018

FBXL13 directs the proteolysis of CEP192 to regulate centrosome homeostasis and cell migration.

EMBO Rep 2018 03 18;19(3). Epub 2018 Jan 18.

Department of Oncology, Cancer Research UK and Medical Research Council Institute for Radiation Oncology, University of Oxford, Oxford, UK

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http://embor.embopress.org/lookup/doi/10.15252/embr.20174479
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http://dx.doi.org/10.15252/embr.201744799DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5836097PMC
March 2018

Cerebrospinal fluid macrophage biomarkers in amyotrophic lateral sclerosis.

Ann Neurol 2018 02 9;83(2):258-268. Epub 2018 Feb 9.

Nuffield Department of Clinical Neurosciences, University of Oxford, United Kingdom.

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http://dx.doi.org/10.1002/ana.25143DOI Listing
February 2018

Biochemical and Mass Spectrometry-Based Approaches to Profile SUMOylation in Human Cells.

Methods Mol Biol 2017 ;1491:131-144

Center for Chromosome Stability and Center for Healthy Aging, Department of Cellular and Molecular Medicine, University of Copenhagen, Panum Institute, Astra Zeneca, Godsmottagningen MA1, Pepparedsleden, 43183, Mölndal, Sweden.

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http://dx.doi.org/10.1007/978-1-4939-6439-0_10DOI Listing
January 2018

Discovery of a Selective Allosteric Inhibitor Targeting Macrodomain 2 of Polyadenosine-Diphosphate-Ribose Polymerase 14.

ACS Chem Biol 2017 11 19;12(11):2866-2874. Epub 2017 Oct 19.

Structural Genomics Consortium (SGC), Nuffield Department of Clinical Medicine, University of Oxford , Oxford, OX3 7DQ, United Kingdom.

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http://dx.doi.org/10.1021/acschembio.7b00445DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6089342PMC
November 2017

A Linear Diubiquitin-Based Probe for Efficient and Selective Detection of the Deubiquitinating Enzyme OTULIN.

Cell Chem Biol 2017 Oct 14;24(10):1299-1313.e7. Epub 2017 Sep 14.

Research Unit Cellular Signal Integration, Institute of Molecular Toxicology and Pharmacology, Helmholtz Zentrum München - German Research Center for Environmental Health, Ingolstaedter Landstrasse 1, 85764 Neuherberg, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.chembiol.2017.08.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5658516PMC
October 2017

Protein arginine methylation: a prominent modification and its demethylation.

Cell Mol Life Sci 2017 09 31;74(18):3305-3315. Epub 2017 Mar 31.

Institute of Molecular Toxicology and Pharmacology, Helmholtz Zentrum München-German Research Center for Environmental Health, Ingolstädter Landstrasse 1, 85764, Neuherberg, Germany.

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http://dx.doi.org/10.1007/s00018-017-2515-zDOI Listing
September 2017

Phosphorylation Induces Structural Changes in the Autographa californica Nucleopolyhedrovirus P10 Protein.

J Virol 2017 07 9;91(13). Epub 2017 Jun 9.

Department of Biological and Medical Sciences, Oxford Brookes University, Oxford, United Kingdom

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http://jvi.asm.org/lookup/doi/10.1128/JVI.00002-17
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http://dx.doi.org/10.1128/JVI.00002-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5469262PMC
July 2017

E3 Ligase cIAP2 Mediates Downregulation of MRE11 and Radiosensitization in Response to HDAC Inhibition in Bladder Cancer.

Cancer Res 2017 06 31;77(11):3027-3039. Epub 2017 Mar 31.

CRUK/MRC Oxford Institute for Radiation Oncology, University of Oxford, Oxford, United Kingdom.

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http://cancerres.aacrjournals.org/lookup/doi/10.1158/0008-54
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http://dx.doi.org/10.1158/0008-5472.CAN-16-3232DOI Listing
June 2017

Linker Histone H1.2 Directs Genome-wide Chromatin Association of the Retinoblastoma Tumor Suppressor Protein and Facilitates Its Function.

Cell Rep 2017 06;19(11):2193-2201

Laboratory of Cancer Biology, Medical Sciences Division, Department of Oncology, University of Oxford, Old Road Campus Research Building, Old Road Campus, Oxford OX3 7DQ, UK. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2017.05.053DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5478878PMC
June 2017

Development of a T-cell Receptor Mimic Antibody against Wild-Type p53 for Cancer Immunotherapy.

Cancer Res 2017 05 31;77(10):2699-2711. Epub 2017 Mar 31.

Nuffield Division of Clinical Laboratory Sciences, Radcliffe Department of Medicine, University of Oxford, John Radcliffe Hospital, Headington, Oxford, United Kingdom.

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http://cancerres.aacrjournals.org/lookup/doi/10.1158/0008-54
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http://dx.doi.org/10.1158/0008-5472.CAN-16-3247DOI Listing
May 2017

Optimizing 2D gas chromatography mass spectrometry for robust tissue, serum and urine metabolite profiling.

Talanta 2017 Apr 7;165:685-691. Epub 2017 Jan 7.

Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Roosevelt Drive, Oxford OX3 7FZ, UK. Electronic address:

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http://dx.doi.org/10.1016/j.talanta.2017.01.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5294743PMC
April 2017

A novel role for endothelial tetrahydrobiopterin in mitochondrial redox balance.

Free Radic Biol Med 2017 03 17;104:214-225. Epub 2017 Jan 17.

BHF Centre of Research Excellence, Division of Cardiovascular Medicine, Radcliffe Department of Medicine, John Radcliffe Hospital, University of Oxford, Oxford OX3 9DU, United Kingdom.

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http://dx.doi.org/10.1016/j.freeradbiomed.2017.01.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5338462PMC
March 2017

Expanding Proteome Coverage with CHarge Ordered Parallel Ion aNalysis (CHOPIN) Combined with Broad Specificity Proteolysis.

J Proteome Res 2017 03 22;16(3):1288-1299. Epub 2017 Feb 22.

Target Discovery Institute, Nuffield Department of Medicine, University of Oxford , Roosevelt Drive, Oxford OX3 7FZ, United Kingdom.

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http://dx.doi.org/10.1021/acs.jproteome.6b00915DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5363888PMC
March 2017

The why and how of amino acid analytics in cancer diagnostics and therapy.

J Biotechnol 2017 Jan 5;242:30-54. Epub 2016 Dec 5.

OncoRay-National Center for Radiation Research in Oncology, Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden and Helmholtz-Zentrum Dresden-Rossendorf, Dresden, Germany; CRUK/MRC Oxford Institute for Radiation Oncology, University of Oxford, Oxford, UK. Electronic address:

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http://dx.doi.org/10.1016/j.jbiotec.2016.12.001DOI Listing
January 2017

CBP/p300 Bromodomains Regulate Amyloid-like Protein Aggregation upon Aberrant Lysine Acetylation.

Cell Chem Biol 2017 Jan 15;24(1):9-23. Epub 2016 Dec 15.

Department of Oncology, University of Oxford, Old Road Campus Research Building, Old Road Campus, Roosevelt Drive, Oxford OX3 7DQ, UK. Electronic address:

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http://dx.doi.org/10.1016/j.chembiol.2016.11.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5266481PMC
January 2017

Metalloprotease SPRTN/DVC1 Orchestrates Replication-Coupled DNA-Protein Crosslink Repair.

Mol Cell 2016 11 27;64(4):704-719. Epub 2016 Oct 27.

Cancer Research UK and Medical Research Council Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Oxford OX3 7DQ, UK. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2016.09.032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5128727PMC
November 2016

Identification of an immunodominant peptide from citrullinated tenascin-C as a major target for autoantibodies in rheumatoid arthritis.

Ann Rheum Dis 2016 10 9;75(10):1876-83. Epub 2015 Dec 9.

Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, Kennedy Institute of Rheumatology, University of Oxford, Oxford, UK.

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http://dx.doi.org/10.1136/annrheumdis-2015-208495DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036245PMC
October 2016

Plasma Biomarker Profile Alterations during Variable Blood Storage.

Clin Chem 2016 09 20;62(9):1272-4. Epub 2016 Jul 20.

Target Discovery Institute Nuffield Department of Medicine University of Oxford, Oxford, UK.

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http://dx.doi.org/10.1373/clinchem.2016.257246DOI Listing
September 2016

SPATA2 Links CYLD to LUBAC, Activates CYLD, and Controls LUBAC Signaling.

Mol Cell 2016 09 30;63(6):990-1005. Epub 2016 Aug 30.

Ludwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Old Road Campus Research Building, Oxford OX3 7DQ, UK. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2016.08.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5031558PMC
September 2016

Plasma degradome affected by variable storage of human blood.

Clin Proteomics 2016 26;13:26. Epub 2016 Sep 26.

Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ UK.

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http://dx.doi.org/10.1186/s12014-016-9126-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5037888PMC
September 2016

Deubiquitinase Usp8 regulates α-synuclein clearance and modifies its toxicity in Lewy body disease.

Proc Natl Acad Sci U S A 2016 08 21;113(32):E4688-97. Epub 2016 Jul 21.

Nuffield Department of Clinical Neurosciences, University of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom;

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http://dx.doi.org/10.1073/pnas.1523597113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4987833PMC
August 2016

DUBbing Cancer: Deubiquitylating Enzymes Involved in Epigenetics, DNA Damage and the Cell Cycle As Therapeutic Targets.

Front Genet 2016 28;7:133. Epub 2016 Jul 28.

Target Discovery Institute, Nuffield Department of Medicine, University of Oxford Oxford, UK.

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http://dx.doi.org/10.3389/fgene.2016.00133DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4963401PMC
August 2016

Structure of the Human Protein Kinase ZAK in Complex with Vemurafenib.

ACS Chem Biol 2016 06 31;11(6):1595-602. Epub 2016 Mar 31.

Target Discovery Institute (TDI), Nuffield Department of Medicine, University of Oxford , Oxford, OX37FZ, United Kingdom.

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http://dx.doi.org/10.1021/acschembio.6b00043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5518171PMC
June 2016

Integrative Phosphoproteomics Links IL-23R Signaling with Metabolic Adaptation in Lymphocytes.

Sci Rep 2016 Apr 15;6:24491. Epub 2016 Apr 15.

Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Roosevelt Drive, Oxford OX3 7FZ, UK.

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http://dx.doi.org/10.1038/srep24491DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4832251PMC
April 2016

USP4 Auto-Deubiquitylation Promotes Homologous Recombination.

Mol Cell 2015 Nov 8;60(3):362-73. Epub 2015 Oct 8.

The Wellcome Trust/Cancer Research UK Gurdon Institute, University of Cambridge, Cambridge CB2 1QN, UK; The Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2015.09.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4643306PMC
November 2015

Expanding the yeast protein arginine methylome.

Proteomics 2015 Sep 2;15(18):3232-43. Epub 2015 Jul 2.

Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK.

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http://dx.doi.org/10.1002/pmic.201500032DOI Listing
September 2015

The mutant Moonwalker TRPC3 channel links calcium signaling to lipid metabolism in the developing cerebellum.

Hum Mol Genet 2015 Jul 23;24(14):4114-25. Epub 2015 Apr 23.

Medical Research Council Functional Genomics Unit, Department of Physiology, Anatomy and Genetics, University of Oxford, Oxford OX1 3PT, UK and

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https://academic.oup.com/hmg/article-lookup/doi/10.1093/hmg/
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http://dx.doi.org/10.1093/hmg/ddv150DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4476454PMC
July 2015

Hypoxia metabolism in ageing.

Aging (Albany NY) 2015 Jul;7(7):465-6

Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4543034PMC
http://dx.doi.org/10.18632/aging.100782DOI Listing
July 2015

Regulation of SUMO2 target proteins by the proteasome in human cells exposed to replication stress.

J Proteome Res 2015 Apr 19;14(4):1687-99. Epub 2015 Mar 19.

†Center for Chromosome Stability, and Center for Healthy Aging, Department of Cellular and Molecular Medicine, University of Copenhagen, Panum Institute, Blegdamsvej 3b, DK-2200 Copenhagen, Denmark.

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http://dx.doi.org/10.1021/pr500997pDOI Listing
April 2015

Cells deficient in base-excision repair reveal cancer hallmarks originating from adjustments to genetic instability.

Nucleic Acids Res 2015 Apr 23;43(7):3667-79. Epub 2015 Mar 23.

Cancer Research UK and Medical Research Council Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Roosevelt Drive, Oxford OX3 7DQ, United Kingdom Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Lavrenteva 10, 630090 Novosibirsk, Russia

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http://dx.doi.org/10.1093/nar/gkv222DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4402536PMC
April 2015

Identification of distinct circulating exosomes in Parkinson's disease.

Ann Clin Transl Neurol 2015 Apr 6;2(4):353-61. Epub 2015 Feb 6.

Nuffield Department of Clinical Neurosciences, University of Oxford Oxford, United Kingdom ; Oxford Parkinson's Disease Centre, University of Oxford Oxford, United Kingdom.

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http://dx.doi.org/10.1002/acn3.175DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4402081PMC
April 2015