Baris E Suzek

Baris E Suzek

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Baris E Suzek

Baris E Suzek

Publications by authors named "Baris E Suzek"

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13Publications

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UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches.

Bioinformatics 2015 Mar 13;31(6):926-32. Epub 2014 Nov 13.

Protein Information Resource, Georgetown University Medical Center, Washington, DC 20007, USA, Department of Computer Engineering, Muğla Sıtkı Koçman University, Muğla 48000, Turkey, Center for Bioinformatics and Computational Biology and Protein Information Resource, University of Delaware, Newark, DE 19711, USA, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK and Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1 rue Michel Servet, 1211 Geneva 4, Switzerland Protein Information Resource, Georgetown University Medical Center, Washington, DC 20007, USA, Department of Computer Engineering, Muğla Sıtkı Koçman University, Muğla 48000, Turkey, Center for Bioinformatics and Computational Biology and Protein Information Resource, University of Delaware, Newark, DE 19711, USA, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK and Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1 rue Michel Servet, 1211 Geneva 4, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btu739DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375400PMC
March 2015

In silico analysis of autoimmune diseases and genetic relationships to vaccination against infectious diseases.

BMC Immunol 2014 Dec 9;15:61. Epub 2014 Dec 9.

Innovation Center for Biomedical Informatics, Georgetown University Medical Center, 2115 Wisconsin Ave NW, Suite 110, Washington, DC, 20007, USA.

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http://dx.doi.org/10.1186/s12865-014-0061-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4266212PMC
December 2014

A fast Peptide Match service for UniProt Knowledgebase.

Bioinformatics 2013 Nov 19;29(21):2808-9. Epub 2013 Aug 19.

Center for Bioinformatics and Computational Biology and Protein Information Resource, University of Delaware, Newark, DE 19711, USA, Protein Information Resource, Georgetown University Medical Center, Washington, DC 20007, USA, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK and Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1211 Geneva 4, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btt484DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3799477PMC
November 2013

Life sciences domain analysis model.

J Am Med Inform Assoc 2012 Nov-Dec;19(6):1095-102. Epub 2012 Jun 28.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, USA.

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http://dx.doi.org/10.1136/amiajnl-2011-000763DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3486731PMC
April 2013

Informatics and data quality at collaborative multicenter Breast and Colon Cancer Family Registries.

J Am Med Inform Assoc 2012 Jun 9;19(e1):e125-8. Epub 2012 Feb 9.

Clinical Research Informatics, Lombardi Cancer Center, Georgetown University Medical Center, Washington, DC, USA.

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http://dx.doi.org/10.1136/amiajnl-2011-000546DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3392863PMC
June 2012

A comprehensive protein-centric ID mapping service for molecular data integration.

Bioinformatics 2011 Apr;27(8):1190-1

Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE 19711, USA.

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http://dx.doi.org/10.1093/bioinformatics/btr101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3072559PMC
April 2011

Infrastructure for the life sciences: design and implementation of the UniProt website.

BMC Bioinformatics 2009 May 8;10:136. Epub 2009 May 8.

Swiss-Prot Group, Swiss Institute of Bioinformatics, CMU, 1 Michel Servet, 1211 Geneva 4, Switzerland.

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http://dx.doi.org/10.1186/1471-2105-10-136DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686714PMC
May 2009

UniRef: comprehensive and non-redundant UniProt reference clusters.

Bioinformatics 2007 May 22;23(10):1282-8. Epub 2007 Mar 22.

Protein Information Resource, Department of Biochemistry and Molecular & Cellular Biology, Georgetown University Medical Center, Washington, DC 20007, USA.

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http://dx.doi.org/10.1093/bioinformatics/btm098DOI Listing
May 2007

The Protein Information Resource.

Nucleic Acids Res 2003 Jan;31(1):345-7

Department of Biochemistry and Molecular Biology, Georgetown University Medical Center, 3900 Reservoir Road, NW, Box 571414, Washington, DC 20057-1414, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC165487PMC
http://dx.doi.org/10.1093/nar/gkg040DOI Listing
January 2003