Barbara Pardini

Barbara Pardini

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Barbara Pardini

Barbara Pardini

Publications by authors named "Barbara Pardini"

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Noncoding RNAs in Extracellular Fluids as Cancer Biomarkers: The New Frontier of Liquid Biopsies.

Cancers (Basel) 2019 Aug 14;11(8). Epub 2019 Aug 14.

Department of Experimental Therapeutics, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

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http://dx.doi.org/10.3390/cancers11081170DOI Listing
August 2019

MicroRNAs and Long Non-Coding RNAs and Their Hormone-Like Activities in Cancer.

Cancers (Basel) 2019 Mar 17;11(3). Epub 2019 Mar 17.

Department of Experimental Therapeutics, The University of Texas MD Anderson Cancer Center, Houston, 1515 Holcombe Boulevard, Unit 422, Houston, TX 77030, USA.

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http://dx.doi.org/10.3390/cancers11030378DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6468345PMC
March 2019

Discovery of common and rare genetic risk variants for colorectal cancer.

Authors:
Jeroen R Huyghe Stephanie A Bien Tabitha A Harrison Hyun Min Kang Sai Chen Stephanie L Schmit David V Conti Conghui Qu Jihyoun Jeon Christopher K Edlund Peyton Greenside Michael Wainberg Fredrick R Schumacher Joshua D Smith David M Levine Sarah C Nelson Nasa A Sinnott-Armstrong Demetrius Albanes M Henar Alonso Kristin Anderson Coral Arnau-Collell Volker Arndt Christina Bamia Barbara L Banbury John A Baron Sonja I Berndt Stéphane Bézieau D Timothy Bishop Juergen Boehm Heiner Boeing Hermann Brenner Stefanie Brezina Stephan Buch Daniel D Buchanan Andrea Burnett-Hartman Katja Butterbach Bette J Caan Peter T Campbell Christopher S Carlson Sergi Castellví-Bel Andrew T Chan Jenny Chang-Claude Stephen J Chanock Maria-Dolores Chirlaque Sang Hee Cho Charles M Connolly Amanda J Cross Katarina Cuk Keith R Curtis Albert de la Chapelle Kimberly F Doheny David Duggan Douglas F Easton Sjoerd G Elias Faye Elliott Dallas R English Edith J M Feskens Jane C Figueiredo Rocky Fischer Liesel M FitzGerald David Forman Manish Gala Steven Gallinger W James Gauderman Graham G Giles Elizabeth Gillanders Jian Gong Phyllis J Goodman William M Grady John S Grove Andrea Gsur Marc J Gunter Robert W Haile Jochen Hampe Heather Hampel Sophia Harlid Richard B Hayes Philipp Hofer Michael Hoffmeister John L Hopper Wan-Ling Hsu Wen-Yi Huang Thomas J Hudson David J Hunter Gemma Ibañez-Sanz Gregory E Idos Roxann Ingersoll Rebecca D Jackson Eric J Jacobs Mark A Jenkins Amit D Joshi Corinne E Joshu Temitope O Keku Timothy J Key Hyeong Rok Kim Emiko Kobayashi Laurence N Kolonel Charles Kooperberg Tilman Kühn Sébastien Küry Sun-Seog Kweon Susanna C Larsson Cecelia A Laurie Loic Le Marchand Suzanne M Leal Soo Chin Lee Flavio Lejbkowicz Mathieu Lemire Christopher I Li Li Li Wolfgang Lieb Yi Lin Annika Lindblom Noralane M Lindor Hua Ling Tin L Louie Satu Männistö Sanford D Markowitz Vicente Martín Giovanna Masala Caroline E McNeil Marilena Melas Roger L Milne Lorena Moreno Neil Murphy Robin Myte Alessio Naccarati Polly A Newcomb Kenneth Offit Shuji Ogino N Charlotte Onland-Moret Barbara Pardini Patrick S Parfrey Rachel Pearlman Vittorio Perduca Paul D P Pharoah Mila Pinchev Elizabeth A Platz Ross L Prentice Elizabeth Pugh Leon Raskin Gad Rennert Hedy S Rennert Elio Riboli Miguel Rodríguez-Barranco Jane Romm Lori C Sakoda Clemens Schafmayer Robert E Schoen Daniela Seminara Mitul Shah Tameka Shelford Min-Ho Shin Katerina Shulman Sabina Sieri Martha L Slattery Melissa C Southey Zsofia K Stadler Christa Stegmaier Yu-Ru Su Catherine M Tangen Stephen N Thibodeau Duncan C Thomas Sushma S Thomas Amanda E Toland Antonia Trichopoulou Cornelia M Ulrich David J Van Den Berg Franzel J B van Duijnhoven Bethany Van Guelpen Henk van Kranen Joseph Vijai Kala Visvanathan Pavel Vodicka Ludmila Vodickova Veronika Vymetalkova Korbinian Weigl Stephanie J Weinstein Emily White Aung Ko Win C Roland Wolf Alicja Wolk Michael O Woods Anna H Wu Syed H Zaidi Brent W Zanke Qing Zhang Wei Zheng Peter C Scacheri John D Potter Michael C Bassik Anshul Kundaje Graham Casey Victor Moreno Goncalo R Abecasis Deborah A Nickerson Stephen B Gruber Li Hsu Ulrike Peters

Nat Genet 2019 01 3;51(1):76-87. Epub 2018 Dec 3.

Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.

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http://www.nature.com/articles/s41588-018-0286-6
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http://dx.doi.org/10.1038/s41588-018-0286-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6358437PMC
January 2019

MicroRNAs as markers of progression in cervical cancer: a systematic review.

BMC Cancer 2018 Jun 27;18(1):696. Epub 2018 Jun 27.

Italian Institute for Genomic Medicine (IIGM), Via Nizza 52, 10126, Turin, Italy.

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http://dx.doi.org/10.1186/s12885-018-4590-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6020348PMC
June 2018

The prognostic value of basal DNA damage level in peripheral blood lymphocytes of patients affected by bladder cancer.

Urol Oncol 2018 05 14;36(5):241.e15-241.e23. Epub 2018 Feb 14.

Genomic variation in human population and complex diseases Research Unit, Italian Institute for Genomic Medicine (IIGM), Turin, Italy; Department of Medical Sciences, University of Turin, Turin, Italy.

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http://dx.doi.org/10.1016/j.urolonc.2018.01.006DOI Listing
May 2018

Polymorphisms in Non-coding RNA Genes and Their Targets Sites as Risk Factors of Sporadic Colorectal Cancer.

Adv Exp Med Biol 2016 ;937:123-49

Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Videnska 1083, 142 00, Prague, Czech Republic.

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http://dx.doi.org/10.1007/978-3-319-42059-2_7DOI Listing
July 2017

Polymorphisms in microRNA binding sites of mucin genes as predictors of clinical outcome in colorectal cancer patients.

Carcinogenesis 2017 01 1;38(1):28-39. Epub 2016 Nov 1.

Department of Molecular Biology of Cancer, Institute of Experimental Medicine, 14200 Prague, Czech Republic.

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http://dx.doi.org/10.1093/carcin/bgw114DOI Listing
January 2017

Epigenome-wide analysis of DNA methylation reveals a rectal cancer-specific epigenomic signature.

Epigenomics 2016 09 16;8(9):1193-207. Epub 2016 Aug 16.

Department of Laboratory Medicine, Örebro University; Örebro, Sweden.

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http://dx.doi.org/10.2217/epi-2016-0044DOI Listing
September 2016

Genotype and Haplotype Analyses of TP53 Gene in Breast Cancer Patients: Association with Risk and Clinical Outcomes.

PLoS One 2015 30;10(7):e0134463. Epub 2015 Jul 30.

Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Prague, Czech Republic; Institute of Biology and Medical Genetics, First Faculty of Medicine Charles University, Prague, Czech Republic.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0134463PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4520609PMC
May 2016

MicroRNA expression profiling in bladder cancer: the challenge of next-generation sequencing in tissues and biofluids.

Int J Cancer 2016 May 9;138(10):2334-45. Epub 2015 Nov 9.

Genomic Variation in Human Population and Complex Diseases Unit, Human Genetics Foundation, Turin, Italy.

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http://dx.doi.org/10.1002/ijc.29895DOI Listing
May 2016

Single nucleotide polymorphisms within interferon signaling pathway genes are associated with colorectal cancer susceptibility and survival.

PLoS One 2014 28;9(10):e111061. Epub 2014 Oct 28.

Division of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), Heidelberg, Germany; Center of Primary Health Care Research, Clinical Research Center, Lund University, Malmö, Sweden.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0111061PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4211713PMC
January 2016

Circulating miRNAs miR-34a and miR-150 associated with colorectal cancer progression.

BMC Cancer 2015 Apr 30;15:329. Epub 2015 Apr 30.

Molecular Therapeutics for Cancer Ireland, National Institute for Cellular Biotechnology, Dublin City University, Glasnevin, Dublin 9, Ireland.

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http://dx.doi.org/10.1186/s12885-015-1327-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4417244PMC
April 2015

Polymorphisms in microRNA genes as predictors of clinical outcomes in colorectal cancer patients.

Carcinogenesis 2015 Jan 3;36(1):82-6. Epub 2014 Nov 3.

Department of Molecular Biology of Cancer, Institute of Experimental Medicine, 14200 Prague, Czech Republic, Institute of Biology and Medical Genetics, First Faculty of Medicine, Charles University, 12108 Prague, Czech Republic.

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https://academic.oup.com/carcin/article-lookup/doi/10.1093/c
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http://dx.doi.org/10.1093/carcin/bgu224DOI Listing
January 2015

Shorter leukocyte telomere length is independently associated with poor survival in patients with bladder cancer.

Cancer Epidemiol Biomarkers Prev 2014 Nov 18;23(11):2439-46. Epub 2014 Sep 18.

Genomic Variation in Human Population and Complex Diseases Unit, Human Genetics Foundation, Turin, Italy. Department of Medical Sciences, University of Turin, Turin, Italy.

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http://dx.doi.org/10.1158/1055-9965.EPI-14-0228DOI Listing
November 2014

Variations in mismatch repair genes and colorectal cancer risk and clinical outcome.

Mutagenesis 2014 Jul 22;29(4):259-65. Epub 2014 Apr 22.

Department of Molecular Biology of Cancer, Institute of Experimental Medicine, Videnska 1083, 14200 Prague, Czech Republic, Institute of Biology and Medical Genetics, First Faculty of Medicine, Charles University, Katerinska 32, 12800 Prague, Czech Republic.

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http://dx.doi.org/10.1093/mutage/geu014DOI Listing
July 2014

Colorectal cancer risk and patients' survival: influence of polymorphisms in genes somatically mutated in colorectal tumors.

Cancer Causes Control 2014 Jun 5;25(6):759-69. Epub 2014 Apr 5.

Department of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 580, 69120, Heidelberg, Germany,

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http://dx.doi.org/10.1007/s10552-014-0379-1DOI Listing
June 2014

Genetic variants in C-type lectin genes are associated with colorectal cancer susceptibility and clinical outcome.

Int J Cancer 2013 Nov 29;133(10):2325-33. Epub 2013 May 29.

Division of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), Heidelberg, Germany.

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http://dx.doi.org/10.1002/ijc.28251DOI Listing
November 2013

Variation within 3'-UTRs of base excision repair genes and response to therapy in colorectal cancer patients: A potential modulation of microRNAs binding.

Clin Cancer Res 2013 Nov 13;19(21):6044-56. Epub 2013 Sep 13.

Authors' Affiliations: Human Genetics Foundation Torino; Department of Medical Sciences, University of Turin, Turin; Department of Biology, University of Pisa, Pisa; Laboratory of Computational Oncology, Center for Integrated Biology (CIBIO), University of Trento, Trento, Italy; Department of Molecular Biology of Cancer, Institute of Experimental Medicine; Departments of Surgery and Oncology, Thomayer Hospital; Institute of Biology and Department of Medical Genetics; and Department of Oncology, First Faculty of Medicine, Charles University, Prague, Czech Republic.

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http://dx.doi.org/10.1158/1078-0432.CCR-13-0314DOI Listing
November 2013

Association of serum bilirubin and promoter variations in HMOX1 and UGT1A1 genes with sporadic colorectal cancer.

Int J Cancer 2012 Oct 18;131(7):1549-55. Epub 2012 Feb 18.

4th Department of Internal Medicine, 1st Faculty of Medicine, Charles University in Prague, Prague, Czech Republic.

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http://doi.wiley.com/10.1002/ijc.27412
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http://dx.doi.org/10.1002/ijc.27412DOI Listing
October 2012

Gene expression variations: potentialities of master regulator polymorphisms in colorectal cancer risk.

Mutagenesis 2012 Mar;27(2):161-7

Department of Molecular Biology of Cancer, Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Videnska 1083, 14220 Prague 4, Czech Republic.

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http://dx.doi.org/10.1093/mutage/ger057DOI Listing
March 2012

Ancestral susceptibility to colorectal cancer.

Mutagenesis 2012 Mar;27(2):197-204

Department of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 580, 69121 Heidelberg, Germany.

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https://academic.oup.com/mutage/article-lookup/doi/10.1093/m
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http://dx.doi.org/10.1093/mutage/ger061DOI Listing
March 2012

Differences in nucleotide excision repair capacity between newly diagnosed colorectal cancer patients and healthy controls.

Mutagenesis 2012 Mar;27(2):225-32

Department of Molecular Biology of Cancer, Institute of Experimental Medicine, Academy of Science of the Czech Republic, Videnska 1083, 14220 Prague, Czech Republic.

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http://dx.doi.org/10.1093/mutage/ger088DOI Listing
March 2012

Variation in the vitamin D receptor gene is not associated with risk of colorectal cancer in the Czech Republic.

J Gastrointest Cancer 2011 Sep;42(3):149-54

Department of Clinical Medicine, Trinity College Centre for Health Sciences, Adelaide and Meath Hospital, Dublin 24, Ireland.

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http://dx.doi.org/10.1007/s12029-010-9168-6DOI Listing
September 2011

DNA damage and nucleotide excision repair capacity in healthy individuals.

Environ Mol Mutagen 2011 Aug 25;52(7):511-7. Epub 2011 Apr 25.

Department of Molecular Biology of Cancer, Institute of Experimental Medicine, Academy of Science of the Czech Republic, Prague.

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http://dx.doi.org/10.1002/em.20650DOI Listing
August 2011

Genetic variants in selenoprotein genes increase risk of colorectal cancer.

Carcinogenesis 2010 Jun 8;31(6):1074-9. Epub 2010 Apr 8.

Institute for Cell and Molecular Biosciences and Human Nutrition Research Centre, The Medical School, Newcastle University, Framlington Place, Newcastle upon Tyne NE2 4HH, UK.

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https://academic.oup.com/carcin/article-lookup/doi/10.1093/c
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http://dx.doi.org/10.1093/carcin/bgq076DOI Listing
June 2010

Genetic variation in adipokine genes and risk of colorectal cancer.

Eur J Endocrinol 2009 Jun 9;160(6):933-40. Epub 2009 Mar 9.

Division of Molecular Genetic Epidemiology C050, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 580, 69120 Heidelberg, Germany.

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http://dx.doi.org/10.1530/EJE-09-0039DOI Listing
June 2009

NBN 657del5 heterozygous mutations and colorectal cancer risk in the Czech Republic.

Mutat Res 2009 Jun 22;666(1-2):64-7. Epub 2009 Apr 22.

Institute of Experimental Medicine, Academy of Sciences of Czech Republic, Prague, Czech Republic.

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http://dx.doi.org/10.1016/j.mrfmmm.2009.04.004DOI Listing
June 2009

Insulin pathway related genes and risk of colorectal cancer: INSR promoter polymorphism shows a protective effect.

Endocr Relat Cancer 2007 Sep;14(3):733-40

Division of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 580, 69120 Heidelberg, Germany.

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https://erc.bioscientifica.com/view/journals/erc/14/3/014073
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http://dx.doi.org/10.1677/ERC-07-0107DOI Listing
September 2007

Sporadic colorectal cancer and individual susceptibility: a review of the association studies investigating the role of DNA repair genetic polymorphisms.

Mutat Res 2007 May-Jun;635(2-3):118-45. Epub 2007 Feb 28.

Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Prague, Czech Republic.

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http://dx.doi.org/10.1016/j.mrrev.2007.02.001DOI Listing
August 2007

Association of DNA repair polymorphisms with DNA repair functional outcomes in healthy human subjects.

Carcinogenesis 2007 Mar 6;28(3):657-64. Epub 2006 Oct 6.

Institute of Experimental Medicine, Videnska 1083, 14200, Academy of Sciences of the Czech Republic, Prague, Czech Republic.

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http://dx.doi.org/10.1093/carcin/bgl187DOI Listing
March 2007