Aylwyn Scally

Aylwyn Scally

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Aylwyn Scally

Aylwyn Scally

Publications by authors named "Aylwyn Scally"

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24Publications

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Detecting archaic introgression using an unadmixed outgroup.

PLoS Genet 2018 09 18;14(9):e1007641. Epub 2018 Sep 18.

Department of Genetics, University of Cambridge, Cambridge United Kingdom.

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http://dx.doi.org/10.1371/journal.pgen.1007641DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6161914PMC
September 2018

Did Our Species Evolve in Subdivided Populations across Africa, and Why Does It Matter?

Trends Ecol Evol 2018 08 11;33(8):582-594. Epub 2018 Jul 11.

Laboratoire Évolution & Diversité Biologique (EDB UMR 5174), Université de Toulouse Midi-Pyrénées, CNRS, IRD, UPS. 118 route de Narbonne, Bat 4R1, 31062 Toulouse cedex 9, France; Instituto Gulbenkian de Ciência, P-2780-156, Oeiras, Portugal.

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http://dx.doi.org/10.1016/j.tree.2018.05.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6092560PMC
August 2018

High-quality genomes reveal new differences between the great apes.

Authors:
Aylwyn Scally

Nature 2018 07;559(7714):336-338

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http://dx.doi.org/10.1038/d41586-018-05679-9DOI Listing
July 2018

Global clues to the nature of genomic mutations in humans.

Authors:
Aylwyn Scally

Elife 2017 05 17;6. Epub 2017 May 17.

Department of Genetics, University of Cambridge, Cambridge, United Kingdom.

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http://dx.doi.org/10.7554/eLife.27605DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5435459PMC
May 2017

Inference of Candidate Germline Mutator Loci in Humans from Genome-Wide Haplotype Data.

PLoS Genet 2017 01 17;13(1):e1006549. Epub 2017 Jan 17.

Department of Genetics, University of Cambridge, Cambridge, United Kingdom.

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http://dx.doi.org/10.1371/journal.pgen.1006549DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5283766PMC
January 2017

The mutation rate in human evolution and demographic inference.

Authors:
Aylwyn Scally

Curr Opin Genet Dev 2016 Dec 31;41:36-43. Epub 2016 Aug 31.

Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, United Kingdom. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2016.07.008DOI Listing
December 2016

Chimpanzee genomic diversity reveals ancient admixture with bonobos.

Science 2016 10 27;354(6311):477-481. Epub 2016 Oct 27.

Institut de Biologia Evolutiva (Consejo Superior de Investigaciones Científicas-Universitat Pompeu Fabra), Barcelona Biomedical Research Park, Doctor Aiguader 88, Barcelona, Catalonia 08003, Spain. National Centre for Genomic Analysis-Centre for Genomic Regulation, Barcelona Institute of Science and Technology, 08028 Barcelona, Spain. Institucio Catalana de Recerca i Estudis Avançats (ICREA), Barcelona, Catalonia 08010, Spain.

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http://dx.doi.org/10.1126/science.aag2602DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5546212PMC
October 2016

Mutation rates and the evolution of germline structure.

Authors:
Aylwyn Scally

Philos Trans R Soc Lond B Biol Sci 2016 07;371(1699)

Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK

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http://dx.doi.org/10.1098/rstb.2015.0137DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4920338PMC
July 2016

A genome-wide survey of genetic variation in gorillas using reduced representation sequencing.

PLoS One 2013 4;8(6):e65066. Epub 2013 Jun 4.

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, United Kingdom.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0065066PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3672199PMC
September 2014

Revising the human mutation rate: implications for understanding human evolution.

Nat Rev Genet 2012 10 11;13(10):745-53. Epub 2012 Sep 11.

Wellcome Trust Sanger Institute, Hinxton, UK.

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http://www.nature.com/articles/nrg3295
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http://dx.doi.org/10.1038/nrg3295DOI Listing
October 2012

A large genome center's improvements to the Illumina sequencing system.

Nat Methods 2008 Dec;5(12):1005-10

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.

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http://dx.doi.org/10.1038/nmeth.1270DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2610436PMC
December 2008

Accurate whole human genome sequencing using reversible terminator chemistry.

Authors:
David R Bentley Shankar Balasubramanian Harold P Swerdlow Geoffrey P Smith John Milton Clive G Brown Kevin P Hall Dirk J Evers Colin L Barnes Helen R Bignell Jonathan M Boutell Jason Bryant Richard J Carter R Keira Cheetham Anthony J Cox Darren J Ellis Michael R Flatbush Niall A Gormley Sean J Humphray Leslie J Irving Mirian S Karbelashvili Scott M Kirk Heng Li Xiaohai Liu Klaus S Maisinger Lisa J Murray Bojan Obradovic Tobias Ost Michael L Parkinson Mark R Pratt Isabelle M J Rasolonjatovo Mark T Reed Roberto Rigatti Chiara Rodighiero Mark T Ross Andrea Sabot Subramanian V Sankar Aylwyn Scally Gary P Schroth Mark E Smith Vincent P Smith Anastassia Spiridou Peta E Torrance Svilen S Tzonev Eric H Vermaas Klaudia Walter Xiaolin Wu Lu Zhang Mohammed D Alam Carole Anastasi Ify C Aniebo David M D Bailey Iain R Bancarz Saibal Banerjee Selena G Barbour Primo A Baybayan Vincent A Benoit Kevin F Benson Claire Bevis Phillip J Black Asha Boodhun Joe S Brennan John A Bridgham Rob C Brown Andrew A Brown Dale H Buermann Abass A Bundu James C Burrows Nigel P Carter Nestor Castillo Maria Chiara E Catenazzi Simon Chang R Neil Cooley Natasha R Crake Olubunmi O Dada Konstantinos D Diakoumakos Belen Dominguez-Fernandez David J Earnshaw Ugonna C Egbujor David W Elmore Sergey S Etchin Mark R Ewan Milan Fedurco Louise J Fraser Karin V Fuentes Fajardo W Scott Furey David George Kimberley J Gietzen Colin P Goddard George S Golda Philip A Granieri David E Green David L Gustafson Nancy F Hansen Kevin Harnish Christian D Haudenschild Narinder I Heyer Matthew M Hims Johnny T Ho Adrian M Horgan Katya Hoschler Steve Hurwitz Denis V Ivanov Maria Q Johnson Terena James T A Huw Jones Gyoung-Dong Kang Tzvetana H Kerelska Alan D Kersey Irina Khrebtukova Alex P Kindwall Zoya Kingsbury Paula I Kokko-Gonzales Anil Kumar Marc A Laurent Cynthia T Lawley Sarah E Lee Xavier Lee Arnold K Liao Jennifer A Loch Mitch Lok Shujun Luo Radhika M Mammen John W Martin Patrick G McCauley Paul McNitt Parul Mehta Keith W Moon Joe W Mullens Taksina Newington Zemin Ning Bee Ling Ng Sonia M Novo Michael J O'Neill Mark A Osborne Andrew Osnowski Omead Ostadan Lambros L Paraschos Lea Pickering Andrew C Pike Alger C Pike D Chris Pinkard Daniel P Pliskin Joe Podhasky Victor J Quijano Come Raczy Vicki H Rae Stephen R Rawlings Ana Chiva Rodriguez Phyllida M Roe John Rogers Maria C Rogert Bacigalupo Nikolai Romanov Anthony Romieu Rithy K Roth Natalie J Rourke Silke T Ruediger Eli Rusman Raquel M Sanches-Kuiper Martin R Schenker Josefina M Seoane Richard J Shaw Mitch K Shiver Steven W Short Ning L Sizto Johannes P Sluis Melanie A Smith Jean Ernest Sohna Sohna Eric J Spence Kim Stevens Neil Sutton Lukasz Szajkowski Carolyn L Tregidgo Gerardo Turcatti Stephanie Vandevondele Yuli Verhovsky Selene M Virk Suzanne Wakelin Gregory C Walcott Jingwen Wang Graham J Worsley Juying Yan Ling Yau Mike Zuerlein Jane Rogers James C Mullikin Matthew E Hurles Nick J McCooke John S West Frank L Oaks Peter L Lundberg David Klenerman Richard Durbin Anthony J Smith

Nature 2008 Nov;456(7218):53-9

Illumina Cambridge Ltd. (Formerly Solexa Ltd), Chesterford Research Park, Little Chesterford, Nr Saffron Walden, Essex CB10 1XL, UK.

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http://dx.doi.org/10.1038/nature07517DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2581791PMC
November 2008