Axel Visel

Axel Visel

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Axel Visel

Publications by authors named "Axel Visel"

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Genomic Resolution of DLX-Orchestrated Transcriptional Circuits Driving Development of Forebrain GABAergic Neurons.

Cell Rep 2019 Aug;28(8):2048-2063.e8

Nina Ireland Laboratory of Developmental Neurobiology, Department of Psychiatry, UCSF Weill Institute for Neurosciences, University of California, San Francisco, San Francisco, CA 94158, USA; Development and Stem Cell Biology Program, University of California, San Francisco, San Francisco, CA 94158, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2019.07.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6750766PMC
August 2019

Cardiac Reprogramming Factors Synergistically Activate Genome-wide Cardiogenic Stage-Specific Enhancers.

Cell Stem Cell 2019 Jul 9;25(1):69-86.e5. Epub 2019 May 9.

Department of Molecular Biology, the Hamon Center for Regenerative Science and Medicine, and Senator Paul D. Wellstone Muscular Dystrophy Cooperative Research Center, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390, USA. Electronic address:

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http://dx.doi.org/10.1016/j.stem.2019.03.022DOI Listing
July 2019

Stable enhancers are active in development, and fragile enhancers are associated with evolutionary adaptation.

Genome Biol 2019 07 15;20(1):140. Epub 2019 Jul 15.

Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20892, USA.

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http://dx.doi.org/10.1186/s13059-019-1750-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6631995PMC
July 2019

A Diagnosis for All Rare Genetic Diseases: The Horizon and the Next Frontiers.

Cell 2019 Mar;177(1):32-37

Faculty of Health and Medical Sciences, University of Western Australia Medical School, Perth, WA, Australia; Western Australian Register of Developmental Anomalies, Genetic Services of Western Australia, Perth, WA, Australia; Office of Population Health Genomics, Western Australian Department of Health, Perth, WA, Australia.

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https://linkinghub.elsevier.com/retrieve/pii/S00928674193022
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http://dx.doi.org/10.1016/j.cell.2019.02.040DOI Listing
March 2019

Parkinson-Associated SNCA Enhancer Variants Revealed by Open Chromatin in Mouse Dopamine Neurons.

Am J Hum Genet 2018 12 29;103(6):874-892. Epub 2018 Nov 29.

McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Molecular and Comparative Pathobiology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2018.10.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6288322PMC
December 2018

Dlx1 and Dlx2 Promote Interneuron GABA Synthesis, Synaptogenesis, and Dendritogenesis.

Cereb Cortex 2018 11;28(11):3797-3815

Department of Psychiatry, Neuroscience Program and the Nina Ireland Laboratory of Developmental Neurobiology, University of California San Francisco, San Francisco, CA, USA.

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http://dx.doi.org/10.1093/cercor/bhx241DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6188538PMC
November 2018

Ultraconserved Enhancers Are Required for Normal Development.

Cell 2018 01 18;172(3):491-499.e15. Epub 2018 Jan 18.

Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA; U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA; School of Natural Sciences, University of California Merced, Merced, CA 95343, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2017.12.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5786478PMC
January 2018

Improved regulatory element prediction based on tissue-specific local epigenomic signatures.

Proc Natl Acad Sci U S A 2017 02 13;114(9):E1633-E1640. Epub 2017 Feb 13.

Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037;

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http://dx.doi.org/10.1073/pnas.1618353114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5338528PMC
February 2017

Distal Limb Patterning Requires Modulation of cis-Regulatory Activities by HOX13.

Cell Rep 2016 12;17(11):2913-2926

Laboratory of Genetics and Development, Institut de Recherches Cliniques de Montréal (IRCM), 110 avenue des Pins Ouest, Montréal, QC H2W1R7, Canada; Department of Medicine, Université de Montréal, Montréal, H3T1J4 QC, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2016.11.039DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5697718PMC
December 2016

The Ties That Bind: Mapping the Dynamic Enhancer-Promoter Interactome.

Cell 2016 11;167(5):1163-1166

MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA; School of Natural Sciences, University of California, Merced, CA 95343, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2016.10.054DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5131802PMC
November 2016

Progressive Loss of Function in a Limb Enhancer during Snake Evolution.

Cell 2016 Oct;167(3):633-642.e11

MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA; School of Natural Sciences, University of California, Merced, CA 95343, USA. Electronic address:

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http://www.cell.com/cell/pdf/S0092-8674(16)31310-1.pdf
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http://www.cell.com/cms/attachment/2073022832/2068642346/mmc
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http://dx.doi.org/10.1016/j.cell.2016.09.028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5484524PMC
October 2016

Transcriptional Networks Controlled by NKX2-1 in the Development of Forebrain GABAergic Neurons.

Neuron 2016 Sep;91(6):1260-1275

Department of Psychiatry, University of California, San Francisco, San Francisco, CA 94143, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2016.08.020DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5319854PMC
September 2016

52 Genetic Loci Influencing Myocardial Mass.

Authors:
Pim van der Harst Jessica van Setten Niek Verweij Georg Vogler Lude Franke Matthew T Maurano Xinchen Wang Irene Mateo Leach Mark Eijgelsheim Nona Sotoodehnia Caroline Hayward Rossella Sorice Osorio Meirelles Leo-Pekka Lyytikäinen Ozren Polašek Toshiko Tanaka Dan E Arking Sheila Ulivi Stella Trompet Martina Müller-Nurasyid Albert V Smith Marcus Dörr Kathleen F Kerr Jared W Magnani Fabiola Del Greco M Weihua Zhang Ilja M Nolte Claudia T Silva Sandosh Padmanabhan Vinicius Tragante Tõnu Esko Gonçalo R Abecasis Michiel E Adriaens Karl Andersen Phil Barnett Joshua C Bis Rolf Bodmer Brendan M Buckley Harry Campbell Megan V Cannon Aravinda Chakravarti Lin Y Chen Alessandro Delitala Richard B Devereux Pieter A Doevendans Anna F Dominiczak Luigi Ferrucci Ian Ford Christian Gieger Tamara B Harris Eric Haugen Matthias Heinig Dena G Hernandez Hans L Hillege Joel N Hirschhorn Albert Hofman Norbert Hubner Shih-Jen Hwang Annamaria Iorio Mika Kähönen Manolis Kellis Ivana Kolcic Ishminder K Kooner Jaspal S Kooner Jan A Kors Edward G Lakatta Kasper Lage Lenore J Launer Daniel Levy Alicia Lundby Peter W Macfarlane Dalit May Thomas Meitinger Andres Metspalu Stefania Nappo Silvia Naitza Shane Neph Alex S Nord Teresa Nutile Peter M Okin Jesper V Olsen Ben A Oostra Josef M Penninger Len A Pennacchio Tune H Pers Siegfried Perz Annette Peters Yigal M Pinto Arne Pfeufer Maria Grazia Pilia Peter P Pramstaller Bram P Prins Olli T Raitakari Soumya Raychaudhuri Ken M Rice Elizabeth J Rossin Jerome I Rotter Sebastian Schafer David Schlessinger Carsten O Schmidt Jobanpreet Sehmi Herman H W Silljé Gianfranco Sinagra Moritz F Sinner Kamil Slowikowski Elsayed Z Soliman Timothy D Spector Wilko Spiering John A Stamatoyannopoulos Ronald P Stolk Konstantin Strauch Sian-Tsung Tan Kirill V Tarasov Bosco Trinh Andre G Uitterlinden Malou van den Boogaard Cornelia M van Duijn Wiek H van Gilst Jorma S Viikari Peter M Visscher Veronique Vitart Uwe Völker Melanie Waldenberger Christian X Weichenberger Harm-Jan Westra Cisca Wijmenga Bruce H Wolffenbuttel Jian Yang Connie R Bezzina Patricia B Munroe Harold Snieder Alan F Wright Igor Rudan Laurie A Boyer Folkert W Asselbergs Dirk J van Veldhuisen Bruno H Stricker Bruce M Psaty Marina Ciullo Serena Sanna Terho Lehtimäki James F Wilson Stefania Bandinelli Alvaro Alonso Paolo Gasparini J Wouter Jukema Stefan Kääb Vilmundur Gudnason Stephan B Felix Susan R Heckbert Rudolf A de Boer Christopher Newton-Cheh Andrew A Hicks John C Chambers Yalda Jamshidi Axel Visel Vincent M Christoffels Aaron Isaacs Nilesh J Samani Paul I W de Bakker

J Am Coll Cardiol 2016 09;68(13):1435-1448

Department of Medical Genetics, University Medical Center Utrecht, Utrecht, the Netherlands; Department of Epidemiology, University Medical Center Utrecht, Utrecht, the Netherlands.

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http://dx.doi.org/10.1016/j.jacc.2016.07.729DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5478167PMC
September 2016

Fishing for Function in the Human Gene Pool.

Trends Genet 2016 07 21;32(7):392-394. Epub 2016 May 21.

Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA. Electronic address:

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http://dx.doi.org/10.1016/j.tig.2016.05.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4912909PMC
July 2016

A distal 594 bp ECR specifies Hmx1 expression in pinna and lateral facial morphogenesis and is regulated by the Hox-Pbx-Meis complex.

Development 2016 07 10;143(14):2582-92. Epub 2016 Jun 10.

Center for Developmental Biology & Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA 98101, USA Department of Oral Health Sciences, University of Washington, Seattle, WA 98195, USA Department of Pediatrics (Craniofacial Medicine), University of Washington, Seattle, WA 98195, USA Department of Anatomy and Developmental Biology, Monash University, Clayton, VIC 3800, Australia

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http://dx.doi.org/10.1242/dev.133736DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958336PMC
July 2016

A unique stylopod patterning mechanism by Shox2-controlled osteogenesis.

Development 2016 07 10;143(14):2548-60. Epub 2016 Jun 10.

Department of Cell and Molecular Biology, Tulane University, New Orleans, LA 70118, USA Southern Center for Biomedical Research and Fujian Key Laboratory of Developmental and Neural Biology, College of Life Sciences, Fujian Normal University, Fuzhou, Fujian 350108, People's Republic of China

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http://dx.doi.org/10.1242/dev.138750DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958343PMC
July 2016

The Cacti Microbiome: Interplay between Habitat-Filtering and Host-Specificity.

Front Microbiol 2016 12;7:150. Epub 2016 Feb 12.

Departamento de Ingeniería Genética, Centro de Investigación y de Estudios Avanzados Irapuato, Mexico.

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http://dx.doi.org/10.3389/fmicb.2016.00150DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4751269PMC
February 2016

Pbx Regulates Patterning of the Cerebral Cortex in Progenitors and Postmitotic Neurons.

Neuron 2015 Dec 6;88(6):1192-1207. Epub 2015 Dec 6.

Department of Psychiatry, Neuroscience Program and the Nina Ireland Laboratory of Developmental Neurobiology, University of California San Francisco, San Francisco, CA 94158, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2015.10.045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4688141PMC
December 2015

Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions.

Cell 2015 May 7;161(5):1012-1025. Epub 2015 May 7.

Max Planck Institute for Molecular Genetics, RG Development & Disease, 14195 Berlin, Germany; Institute for Medical and Human Genetics, Charité Universitätsmedizin Berlin, 13353 Berlin, Germany; Berlin-Brandenburg Center for Regenerative Therapies (BCRT), Charité Universitätsmedizin Berlin, 13353 Berlin, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2015.04.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4791538PMC
May 2015

Occupancy by key transcription factors is a more accurate predictor of enhancer activity than histone modifications or chromatin accessibility.

Epigenetics Chromatin 2015 23;8:16. Epub 2015 Apr 23.

Center for Comparative Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, The Pennsylvania State University, 304 Wartik Laboratory, University Park, PA 16802 USA.

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http://dx.doi.org/10.1186/s13072-015-0009-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4432502PMC
May 2015

Genomic perspectives of transcriptional regulation in forebrain development.

Neuron 2015 Jan;85(1):27-47

Department of Psychiatry, Rock Hall, University of California, San Francisco, San Francisco, CA 94158-2324, USA.

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http://dx.doi.org/10.1016/j.neuron.2014.11.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4438709PMC
January 2015

Tissue-specific RNA expression marks distant-acting developmental enhancers.

PLoS Genet 2014 Sep 4;10(9):e1004610. Epub 2014 Sep 4.

Lawrence Berkeley National Laboratory, Berkeley, California, United States of America; U.S. Department of Energy Joint Genome Institute, Walnut Creek, California, United States of America; School of Natural Sciences, University of California, Merced, California, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1004610DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4154669PMC
September 2014

Dynamic GATA4 enhancers shape the chromatin landscape central to heart development and disease.

Nat Commun 2014 Sep 24;5:4907. Epub 2014 Sep 24.

1] Department of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, Massachusetts 02115, USA [2] Harvard Stem Cell Institute, Harvard University, 1350 Massachusetts Avenue, Suite 727W, Cambridge, Massachusetts 02138, USA.

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http://dx.doi.org/10.1038/ncomms5907DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4236193PMC
September 2014

Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis.

Genome Res 2014 Jun 21;24(6):920-9. Epub 2014 Apr 21.

Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA; US Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA;

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http://dx.doi.org/10.1101/gr.168930.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4032856PMC
June 2014

Transcriptional regulation of enhancers active in protodomains of the developing cerebral cortex.

Neuron 2014 Jun 8;82(5):989-1003. Epub 2014 May 8.

Department of Psychiatry, Program in Neuroscience, Rock Hall, University of California at San Francisco, San Francisco, CA 94158-2324, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2014.04.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4104757PMC
June 2014

Function-based identification of mammalian enhancers using site-specific integration.

Nat Methods 2014 May 23;11(5):566-71. Epub 2014 Mar 23.

1] Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA. [2] US Department of Energy Joint Genome Institute, Walnut Creek, California, USA.

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http://dx.doi.org/10.1038/nmeth.2886DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4008384PMC
May 2014

Stop codon reassignments in the wild.

Science 2014 May;344(6186):909-13

Department of Energy Joint Genome Institute (DOE JGI), Walnut Creek, CA 94598, USA. Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1126/science.1250691DOI Listing
May 2014

Multiple conserved regulatory domains promote Fezf2 expression in the developing cerebral cortex.

Neural Dev 2014 Mar 12;9. Epub 2014 Mar 12.

Department of Molecular, Cell and Developmental Biology, University of California, Santa Cruz, CA, USA.

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http://dx.doi.org/10.1186/1749-8104-9-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4008173PMC
March 2014

Rapid and pervasive changes in genome-wide enhancer usage during mammalian development.

Cell 2013 Dec;155(7):1521-31

Genomics Division, MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA 94598, USA; School of Natural Sciences, University of California, Merced, CA 95343, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2013.11.033DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3989111PMC
December 2013

Dlx1&2-dependent expression of Zfhx1b (Sip1, Zeb2) regulates the fate switch between cortical and striatal interneurons.

Neuron 2013 Jan;77(1):83-98

Department of Psychiatry, Neuroscience Program, and the Nina Ireland Laboratory of Developmental Neurobiology, University of California, San Francisco (UCSF), San Francisco, CA 94158-2324, USA.

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http://dx.doi.org/10.1016/j.neuron.2012.11.035DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3547499PMC
January 2013

Differences in enhancer activity in mouse and zebrafish reporter assays are often associated with changes in gene expression.

BMC Genomics 2012 Dec 19;13:713. Epub 2012 Dec 19.

Centro Andaluz de Biología del Desarrollo (CABD), CSIC-Universidad Pablo de Olavide-Junta de Andalucía, Ctra. Utrera Km 1, Seville 41013, Spain.

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http://dx.doi.org/10.1186/1471-2164-13-713DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3541358PMC
December 2012

A liver enhancer in the fibrinogen gene cluster.

Blood 2011 Jan 4;117(1):276-82. Epub 2010 Oct 4.

Department of Genetic Medicine and Development, University of Geneva Faculty of Medicine, Geneva, Switzerland.

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http://dx.doi.org/10.1182/blood-2010-07-295410DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3320846PMC
January 2011

Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers.

Genome Res 2010 May 2;20(5):565-77. Epub 2010 Apr 2.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA.

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http://dx.doi.org/10.1101/gr.104471.109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2860159PMC
May 2010

Targeted deletion of the 9p21 non-coding coronary artery disease risk interval in mice.

Nature 2010 Mar 21;464(7287):409-12. Epub 2010 Feb 21.

Genomics Division, MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

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http://dx.doi.org/10.1038/nature08801DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2938076PMC
March 2010

Genomic views of distant-acting enhancers.

Nature 2009 Sep;461(7261):199-205

Genomics Division, MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

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http://dx.doi.org/10.1038/nature08451DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2923221PMC
September 2009

Functional autonomy of distant-acting human enhancers.

Genomics 2009 Jun 5;93(6):509-13. Epub 2009 Mar 5.

Genomics Division, MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, CA 94720 USA.

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http://dx.doi.org/10.1016/j.ygeno.2009.02.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2683195PMC
June 2009

Transcriptional control of axonal guidance and sorting in dorsal interneurons by the Lim-HD proteins Lhx9 and Lhx1.

Neural Dev 2009 Jun 19;4:21. Epub 2009 Jun 19.

Department of Medical Neurobiology, IMRIC, Hebrew University, Hadassah Medical School, Jerusalem, Israel.

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http://dx.doi.org/10.1186/1749-8104-4-21DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2704203PMC
June 2009

Ultraconservation identifies a small subset of extremely constrained developmental enhancers.

Nat Genet 2008 Feb 6;40(2):158-60. Epub 2008 Jan 6.

Genomics Division, MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

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http://dx.doi.org/10.1038/ng.2007.55DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647775PMC
February 2008

Regulatory pathway analysis by high-throughput in situ hybridization.

PLoS Genet 2007 Oct;3(10):1867-83

Department of Genes and Behavior, Max Planck Institute of Biophysical Chemistry, Goettingen, Germany.

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http://dx.doi.org/10.1371/journal.pgen.0030178DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2041993PMC
October 2007

Deletion of ultraconserved elements yields viable mice.

PLoS Biol 2007 Sep;5(9):e234

Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.

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http://dx.doi.org/10.1371/journal.pbio.0050234DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1964772PMC
September 2007

Enhancer identification through comparative genomics.

Semin Cell Dev Biol 2007 Feb 5;18(1):140-52. Epub 2007 Jan 5.

Genomics Division, MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1016/j.semcdb.2006.12.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1855162PMC
February 2007

VISTA Enhancer Browser--a database of tissue-specific human enhancers.

Nucleic Acids Res 2007 Jan 27;35(Database issue):D88-92. Epub 2006 Nov 27.

Genomics Division, MS 84-171, Lawrence Berkeley National Laboratory, Berkeley, CA 94720 USA.

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http://dx.doi.org/10.1093/nar/gkl822DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1716724PMC
January 2007

Genome-wide atlas of gene expression in the adult mouse brain.

Authors:
Ed S Lein Michael J Hawrylycz Nancy Ao Mikael Ayres Amy Bensinger Amy Bernard Andrew F Boe Mark S Boguski Kevin S Brockway Emi J Byrnes Lin Chen Li Chen Tsuey-Ming Chen Mei Chi Chin Jimmy Chong Brian E Crook Aneta Czaplinska Chinh N Dang Suvro Datta Nick R Dee Aimee L Desaki Tsega Desta Ellen Diep Tim A Dolbeare Matthew J Donelan Hong-Wei Dong Jennifer G Dougherty Ben J Duncan Amanda J Ebbert Gregor Eichele Lili K Estin Casey Faber Benjamin A Facer Rick Fields Shanna R Fischer Tim P Fliss Cliff Frensley Sabrina N Gates Katie J Glattfelder Kevin R Halverson Matthew R Hart John G Hohmann Maureen P Howell Darren P Jeung Rebecca A Johnson Patrick T Karr Reena Kawal Jolene M Kidney Rachel H Knapik Chihchau L Kuan James H Lake Annabel R Laramee Kirk D Larsen Christopher Lau Tracy A Lemon Agnes J Liang Ying Liu Lon T Luong Jesse Michaels Judith J Morgan Rebecca J Morgan Marty T Mortrud Nerick F Mosqueda Lydia L Ng Randy Ng Geralyn J Orta Caroline C Overly Tu H Pak Sheana E Parry Sayan D Pathak Owen C Pearson Ralph B Puchalski Zackery L Riley Hannah R Rockett Stephen A Rowland Joshua J Royall Marcos J Ruiz Nadia R Sarno Katherine Schaffnit Nadiya V Shapovalova Taz Sivisay Clifford R Slaughterbeck Simon C Smith Kimberly A Smith Bryan I Smith Andy J Sodt Nick N Stewart Kenda-Ruth Stumpf Susan M Sunkin Madhavi Sutram Angelene Tam Carey D Teemer Christina Thaller Carol L Thompson Lee R Varnam Axel Visel Ray M Whitlock Paul E Wohnoutka Crissa K Wolkey Victoria Y Wong Matthew Wood Murat B Yaylaoglu Rob C Young Brian L Youngstrom Xu Feng Yuan Bin Zhang Theresa A Zwingman Allan R Jones

Nature 2007 Jan 6;445(7124):168-76. Epub 2006 Dec 6.

Allen Institute for Brain Science, Seattle, Washington 98103, USA.

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http://dx.doi.org/10.1038/nature05453DOI Listing
January 2007

Comprehensive analysis of the expression patterns of the adenylate cyclase gene family in the developing and adult mouse brain.

J Comp Neurol 2006 Jun;496(5):684-97

Max Planck Institute of Experimental Endocrinology, Hannover, Germany.

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http://dx.doi.org/10.1002/cne.20953DOI Listing
June 2006

Adenylate Cyclase 1 dependent refinement of retinotopic maps in the mouse.

Vision Res 2004 Dec;44(28):3357-64

Department of Neuroscience, Baylor College of Medicine, One Baylor Plaza S-603, Houston, TX 77030, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S004269890400453
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http://dx.doi.org/10.1016/j.visres.2004.09.036DOI Listing
December 2004

Scaffolding by ERK3 regulates MK5 in development.

EMBO J 2004 Dec 11;23(24):4770-9. Epub 2004 Nov 11.

Medical School Hannover, Institute of Biochemistry, Hannover, Germany.

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http://dx.doi.org/10.1038/sj.emboj.7600467DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC535084PMC
December 2004

Expression of the winged helix/forkhead gene, foxn4, during zebrafish development.

Brain Res Dev Brain Res 2004 Oct;153(1):115-9

Department of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.

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http://dx.doi.org/10.1016/j.devbrainres.2004.05.014DOI Listing
October 2004

GenePaint.org: an atlas of gene expression patterns in the mouse embryo.

Nucleic Acids Res 2004 Jan;32(Database issue):D552-6

Max Planck Institute of Experimental Endocrinology, Feodor-Lynen-Strasse 7, D-30625 Hannover, Germany.

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http://dx.doi.org/10.1093/nar/gkh029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC308763PMC
January 2004