Publications by authors named "Avinash Ramu"

11Publications

Optimizing cancer genome sequencing and analysis.

Cell Syst 2015 Sep;1(3):210-223

The McDonnell Genome Institute, Washington University, St. Louis, MO, USA, 63108 ; Department of Genetics, Washington University, St. Louis, MO, USA, 63108 ; Siteman Cancer Center, Washington University, St. Louis, MO, USA, 63108 ; Department of Medicine, Washington University, St. Louis, MO, USA, 63108.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cels.2015.08.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4669575PMC
September 2015

Genome Modeling System: A Knowledge Management Platform for Genomics.

PLoS Comput Biol 2015 Jul 9;11(7):e1004274. Epub 2015 Jul 9.

The Genome Institute, Washington University in St. Louis, St. Louis, Missouri, United States of America; Department of Genetics, Washington University School of Medicine, St. Louis, Missouri, United States of America; Department of Medicine, Washington University School of Medicine, St. Louis, Missouri, United States of America; Siteman Cancer Center, Washington University School of Medicine, St. Louis, Missouri, United States of America; Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, Missouri, United States of America.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1371/journal.pcbi.1004274DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4497734PMC
July 2015

DeNovoGear: de novo indel and point mutation discovery and phasing.

Nat Methods 2013 Oct 25;10(10):985-7. Epub 2013 Aug 25.

1] Department of Genetics, Washington University School of Medicine, St. Louis, Missouri, USA. [2].

View Article

Download full-text PDF

Source
http://www.nature.com/articles/nmeth.2611
Publisher Site
http://dx.doi.org/10.1038/nmeth.2611DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4003501PMC
October 2013

A scalable method for identifying frequent subtrees in sets of large phylogenetic trees.

BMC Bioinformatics 2012 Oct 3;13:256. Epub 2012 Oct 3.

Electrical and Computer Engineering, University of Florida, Gainesville, FL, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-13-256DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3543182PMC
October 2012