Publications by authors named "Aurora Ruiz-Herrera"

44Publications

The Plasticity of Genome Architecture.

Authors:
Marta Farré Aurora Ruiz-Herrera

Genes (Basel) 2020 Nov 27;11(12). Epub 2020 Nov 27.

Genome Integrity and Instability Group, Institut de Biotecnologia i Biomedicina, Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallès, Spain.

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November 2020

Whole genome sequencing identifies allelic ratio distortion in sperm involving genes related to spermatogenesis in a swine model.

Authors:
Marta Gòdia Joaquim Casellas Aurora Ruiz-Herrera Joan E Rodríguez-Gil Anna Castelló Armand Sánchez Alex Clop

DNA Res 2020 Dec;27(5)

Center for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, Cerdanyola del Vallès, Catalonia 08193, Spain.

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December 2020

Meiotic Executioner Genes Protect the Y from Extinction.

Authors:
Paul D Waters Aurora Ruiz-Herrera

Trends Genet 2020 10 6;36(10):728-738. Epub 2020 Aug 6.

Genome Integrity and Instability Group, Institut de Biotecnologia i Biomedicina (IBB), Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès, 08193, Spain; Departament de Biologia Cel·lular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès, 08193, Spain. Electronic address:

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October 2020

Chromosomal Differentiation in Genetically Isolated Populations of the Marsh-Specialist (Mammalia: Soricidae).

Authors:
Francisca Garcia Luis Biedma Javier Calzada Jacinto Román Alberto Lozano Francisco Cortés José A Godoy Aurora Ruiz-Herrera

Genes (Basel) 2020 03 2;11(3). Epub 2020 Mar 2.

Departament de Biologia Cel·lular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Campus UAB, 08193 Cerdanyola del Vallès, Spain.

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March 2020

CENP-A binding domains and recombination patterns in horse spermatocytes.

Authors:
Eleonora Cappelletti Francesca M Piras Claudia Badiale Marina Bambi Marco Santagostino Covadonga Vara Teri A Masterson Kevin F Sullivan Solomon G Nergadze Aurora Ruiz-Herrera Elena Giulotto

Sci Rep 2019 11 1;9(1):15800. Epub 2019 Nov 1.

Department of Biology and Biotechnology "Lazzaro Spallanzani", University of Pavia, 27100, Pavia, Italy.

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November 2019

Chromosomics: Bridging the Gap between Genomes and Chromosomes.

Authors:
Janine E Deakin Sally Potter Rachel O'Neill Aurora Ruiz-Herrera Marcelo B Cioffi Mark D B Eldridge Kichi Fukui Jennifer A Marshall Graves Darren Griffin Frank Grutzner Lukáš Kratochvíl Ikuo Miura Michail Rovatsos Kornsorn Srikulnath Erik Wapstra Tariq Ezaz

Genes (Basel) 2019 08 20;10(8). Epub 2019 Aug 20.

Institute for Applied Ecology, University of Canberra, Canberra, ACT 2617, Australia.

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August 2019

Three-Dimensional Genomic Structure and Cohesin Occupancy Correlate with Transcriptional Activity during Spermatogenesis.

Authors:
Covadonga Vara Andreu Paytuví-Gallart Yasmina Cuartero François Le Dily Francisca Garcia Judit Salvà-Castro Laura Gómez-H Eva Julià Catia Moutinho Riccardo Aiese Cigliano Walter Sanseverino Oscar Fornas Alberto M Pendás Holger Heyn Paul D Waters Marc A Marti-Renom Aurora Ruiz-Herrera

Cell Rep 2019 07;28(2):352-367.e9

Departament de Biologia Cel.lular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain; Genome Integrity and Instability Group, Institut de Biotecnologia i Biomedicina (IBB), Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain. Electronic address:

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July 2019

PRDM9 Diversity at Fine Geographical Scale Reveals Contrasting Evolutionary Patterns and Functional Constraints in Natural Populations of House Mice.

Authors:
Covadonga Vara Laia Capilla Luca Ferretti Alice Ledda Rosa A Sánchez-Guillén Sofia I Gabriel Guillermo Albert-Lizandra Beatriu Florit-Sabater Judith Bello-Rodríguez Jacint Ventura Jeremy B Searle Maria L Mathias Aurora Ruiz-Herrera

Mol Biol Evol 2019 08;36(8):1686-1700

Genome Integrity and Instability Group, Institut de Biotecnologia i Biomedicina, Universitat Autònoma de Barcelona, Barcelona, Spain.

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August 2019

Per-Nucleus Crossover Covariation and Implications for Evolution.

Authors:
Shunxin Wang Carl Veller Fei Sun Aurora Ruiz-Herrera Yongliang Shang Hongbin Liu Denise Zickler Zijiang Chen Nancy Kleckner Liangran Zhang

Cell 2019 04 14;177(2):326-338.e16. Epub 2019 Mar 14.

Center for Reproductive Medicine, Shandong University, National Research Center for Assisted Reproductive Technology and Reproductive Genetics, Key Laboratory of Reproductive Endocrinology of Ministry of Education, Jinan, Shandong 250001, China; Advanced Medical Research Institute, Shandong University, Jinan, Shandong 250014, China; State Key Laboratory of Microbial Technology, Shandong University, Qingdao 266237, China. Electronic address:

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April 2019

Mammalian Comparative Genomics Reveals Genetic and Epigenetic Features Associated with Genome Reshuffling in Rodentia.

Authors:
Laia Capilla Rosa Ana Sánchez-Guillén Marta Farré Andreu Paytuví-Gallart Roberto Malinverni Jacint Ventura Denis M Larkin Aurora Ruiz-Herrera

Genome Biol Evol 2016 12;8(12):3703-3717

Genome Integrity and Instability Group, Institut de Biotecnologia i Biomedicina (IBB), Universitat Autònoma de Barcelona (UAB), Barcelona, Spain.

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December 2016

Recombination correlates with synaptonemal complex length and chromatin loop size in bovids-insights into mammalian meiotic chromosomal organization.

Authors:
Aurora Ruiz-Herrera Miluse Vozdova Jonathan Fernández Hana Sebestova Laia Capilla Jan Frohlich Covadonga Vara Adrià Hernández-Marsal Jaroslav Sipek Terence J Robinson Jiri Rubes

Chromosoma 2017 Oct 18;126(5):615-631. Epub 2017 Jan 18.

Central European Institute of Technology - Veterinary Research Institute, Brno, Czech Republic.

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October 2017

Detailed analysis of inversions predicted between two human genomes: errors, real polymorphisms, and their origin and population distribution.

Authors:
David Vicente-Salvador Marta Puig Magdalena Gayà-Vidal Sarai Pacheco Carla Giner-Delgado Isaac Noguera David Izquierdo Alexander Martínez-Fundichely Aurora Ruiz-Herrera Xavier Estivill Cristina Aguado José Ignacio Lucas-Lledó Mario Cáceres

Hum Mol Genet 2017 02;26(3):567-581

Institut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra (Barcelona), Spain.

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February 2017

Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx.

Authors:
Federico Abascal André Corvelo Fernando Cruz José L Villanueva-Cañas Anna Vlasova Marina Marcet-Houben Begoña Martínez-Cruz Jade Yu Cheng Pablo Prieto Víctor Quesada Javier Quilez Gang Li Francisca García Miriam Rubio-Camarillo Leonor Frias Paolo Ribeca Salvador Capella-Gutiérrez José M Rodríguez Francisco Câmara Ernesto Lowy Luca Cozzuto Ionas Erb Michael L Tress Jose L Rodriguez-Ales Jorge Ruiz-Orera Ferran Reverter Mireia Casas-Marce Laura Soriano Javier R Arango Sophia Derdak Beatriz Galán Julie Blanc Marta Gut Belen Lorente-Galdos Marta Andrés-Nieto Carlos López-Otín Alfonso Valencia Ivo Gut José L García Roderic Guigó William J Murphy Aurora Ruiz-Herrera Tomas Marques-Bonet Guglielmo Roma Cedric Notredame Thomas Mailund M Mar Albà Toni Gabaldón Tyler Alioto José A Godoy

Genome Biol 2016 12 14;17(1):251. Epub 2016 Dec 14.

Department of Integrative Ecology, Doñana Biological Station (EBD), Spanish National Research Council (CSIC), C/ Americo Vespucio, s/n, 41092, Sevilla, Spain.

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December 2016

Mammalian Meiotic Recombination: A Toolbox for Genome Evolution.

Authors:
Laia Capilla Montserrat Garcia Caldés Aurora Ruiz-Herrera

Cytogenet Genome Res 2016 8;150(1):1-16. Epub 2016 Dec 8.

Genome Integrity and Instability Group, Institut de Biotecnologia i Biomedicina, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.

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January 2017

Meiotic behaviour of evolutionary sex-autosome translocations in Bovidae.

Authors:
Miluse Vozdova Aurora Ruiz-Herrera Jonathan Fernandez Halina Cernohorska Jan Frohlich Hana Sebestova Svatava Kubickova Jiri Rubes

Chromosome Res 2016 09 30;24(3):325-38. Epub 2016 Apr 30.

Department of Genetics and Reproduction, Central European Institute of Technology-Veterinary Research Institute, Hudcova 70, 621 00, Brno, Czech Republic.

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September 2016

Telomere homeostasis in mammalian germ cells: a review.

Authors:
Rita Reig-Viader Montserrat Garcia-Caldés Aurora Ruiz-Herrera

Chromosoma 2016 Jun 2;125(2):337-51. Epub 2015 Nov 2.

Departament de Biologia Cel.lular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Campus UAB, 08193, Cerdanyola del Vallès, Spain.

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June 2016

An Integrative Breakage Model of genome architecture, reshuffling and evolution: The Integrative Breakage Model of genome evolution, a novel multidisciplinary hypothesis for the study of genome plasticity.

Authors:
Marta Farré Terence J Robinson Aurora Ruiz-Herrera

Bioessays 2015 May 4;37(5):479-88. Epub 2015 Mar 4.

Departament de Biologia Cel·lular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Campus UAB, Barcelona, Spain.

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May 2015

Use of targeted SNP selection for an improved anchoring of the melon (Cucumis melo L.) scaffold genome assembly.

Authors:
Jason M Argyris Aurora Ruiz-Herrera Pablo Madriz-Masis Walter Sanseverino Jordi Morata Marta Pujol Sebastián E Ramos-Onsins Jordi Garcia-Mas

BMC Genomics 2015 Jan 22;16. Epub 2015 Jan 22.

IRTA, Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, 08193, Barcelona, Spain.

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January 2015

Telomere homeostasis is compromised in spermatocytes from patients with idiopathic infertility.

Authors:
Rita Reig-Viader Laia Capilla Marta Vila-Cejudo Ferrán Garcia Begoña Anguita Montserrat Garcia-Caldés Aurora Ruiz-Herrera

Fertil Steril 2014 Sep 1;102(3):728-738.e1. Epub 2014 Jul 1.

Departament de Biologia Cel.lular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Campus UAB, Cerdanyola del Vallès, Spain; Institut de Biotecnologia i Biomedicina (IBB), Universitat Autònoma de Barcelona, Campus UAB, Cerdanyola del Vallès, Spain. Electronic address:

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September 2014

Unraveling the effect of genomic structural changes in the rhesus macaque - implications for the adaptive role of inversions.

Authors:
Anna Ullastres Marta Farré Laia Capilla Aurora Ruiz-Herrera

BMC Genomics 2014 Jun 26;15:530. Epub 2014 Jun 26.

Institut de Biotecnologia i Biomedicina (IBB), Universitat Autònoma de Barcelona, Campus UAB, 08193, Cerdanyola del Vallès, Barcelona, Spain.

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June 2014