Ate van Burgt

Ate van der Burgt

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Ate van Burgt

Ate van der Burgt

Publications by authors named "Ate van der Burgt"

15Publications

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1PubMed Central Citations

Novel Introner-Like Elements in fungi Are Involved in Parallel Gains of Spliceosomal Introns.

PLoS One 2015 5;10(6):e0129302. Epub 2015 Jun 5.

Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands; Present address: Dyadic, Wageningen, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0129302PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4457414PMC
April 2016

Functional analysis of the conserved transcriptional regulator CfWor1 in Cladosporium fulvum reveals diverse roles in the virulence of plant pathogenic fungi.

Mol Microbiol 2014 Apr 27;92(1):10-27. Epub 2014 Feb 27.

Laboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands.

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http://doi.wiley.com/10.1111/mmi.12535
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http://dx.doi.org/10.1111/mmi.12535DOI Listing
April 2014

Pseudogenization in pathogenic fungi with different host plants and lifestyles might reflect their evolutionary past.

Mol Plant Pathol 2014 Feb 28;15(2):133-44. Epub 2013 Oct 28.

Laboratory of Phytopathology, Wageningen University and Research Centre, PO Box 16, 6700 AA, Wageningen, the Netherlands; Applied Bioinformatics, Plant Research International, Wageningen University and Research Centre, PO Box 16, 6700 AA, Wageningen, the Netherlands.

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http://dx.doi.org/10.1111/mpp.12072DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6638865PMC
February 2014

Automated alignment-based curation of gene models in filamentous fungi.

BMC Bioinformatics 2014 Jan 16;15:19. Epub 2014 Jan 16.

Laboratory of Phytopathology, Wageningen University & Research Centre, P,O, Box 16, 6700 AA Wageningen, The Netherlands.

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http://dx.doi.org/10.1186/1471-2105-15-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3898260PMC
January 2014

At the origin of spliceosomal introns: Is multiplication of introner-like elements the main mechanism of intron gain in fungi?

Commun Integr Biol 2013 Mar;6(2):e23147

Laboratory of Phytopathology; Wageningen University; Wageningen, The Netherlands.

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http://dx.doi.org/10.4161/cib.23147DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3609843PMC
March 2013

Birth of new spliceosomal introns in fungi by multiplication of introner-like elements.

Curr Biol 2012 Jul 31;22(13):1260-5. Epub 2012 May 31.

Laboratory of Phytopathology, Wageningen University, 6708PB Wageningen, The Netherlands.

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http://dx.doi.org/10.1016/j.cub.2012.05.011DOI Listing
July 2012

In silico miRNA prediction in metazoan genomes: balancing between sensitivity and specificity.

BMC Genomics 2009 Apr 30;10:204. Epub 2009 Apr 30.

Applied Bioinformatics, Plant Research International, Wageningen University & Research Centre, PO Box 16, 6700 AA Wageningen, The Netherlands.

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http://dx.doi.org/10.1186/1471-2164-10-204DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688010PMC
April 2009

The use of multiple hierarchically independent gene ontology terms in gene function prediction and genome annotation.

In Silico Biol 2007 ;7(6):575-82

Biometris, Wageningen University and Research Centre, 6700 AC Wageningen, The Netherlands.

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June 2008

High-throughput bioinformatics with the Cyrille2 pipeline system.

BMC Bioinformatics 2008 Feb 12;9:96. Epub 2008 Feb 12.

Applied Bioinformatics, Plant Research International, PO Box 16, 6700AA Wageningen, The Netherlands.

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http://dx.doi.org/10.1186/1471-2105-9-96DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2268656PMC
February 2008