Publications by authors named "Asli Silahtaroglu"

41Publications

The Interchromatin Compartment Participates in the Structural and Functional Organization of the Cell Nucleus.

Bioessays 2020 02;42(2):e1900132

Institute of Molecular Biology (IMB) Ackermannweg 4, 55128 Mainz, Germany, and Institute of Pharmacy & Molecular Biotechnology (IPMB), University Heidelberg, Im Neuenheimer Feld 364, 69120, Heidelberg, Germany.

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http://dx.doi.org/10.1002/bies.201900132DOI Listing
February 2020

Risks and Recommendations in Prenatally Detected De Novo Balanced Chromosomal Rearrangements from Assessment of Long-Term Outcomes.

Am J Hum Genet 2018 06 24;102(6):1090-1103. Epub 2018 May 24.

Wilhelm Johannsen Centre for Functional Genome Research, Department of Cellular and Molecular Medicine, University of Copenhagen, 2200 Copenhagen N, Denmark; Department of Clinical Genetics, Copenhagen University Hospital, Rigshospitalet, 2100 Copenhagen O, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2018.04.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5992120PMC
June 2018

Perturbations in the p53/miR-34a/SIRT1 pathway in the R6/2 Huntington's disease model.

Mol Cell Neurosci 2018 04 28;88:118-129. Epub 2017 Dec 28.

Department of Cellular and Molecular Medicine, University of Copenhagen, DK-2200 Copenhagen N, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.mcn.2017.12.009DOI Listing
April 2018

The DLGAP family: neuronal expression, function and role in brain disorders.

Mol Brain 2017 09 4;10(1):43. Epub 2017 Sep 4.

Department of Cellular and Molecular Medicine, Faculty of Medical and Health Sciences, University of Copenhagen, DK-2200, Copenhagen, Denmark.

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http://dx.doi.org/10.1186/s13041-017-0324-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5583998PMC
September 2017

Associating transcription factors and conserved RNA structures with gene regulation in the human brain.

Sci Rep 2017 07 18;7(1):5776. Epub 2017 Jul 18.

Center for non-coding RNA in Technology and Health, University of Copenhagen, Grønnegårdsvej 3, 1870, Frederiksberg C, Denmark.

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http://dx.doi.org/10.1038/s41598-017-06200-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5516038PMC
July 2017

Automation of a single-DNA molecule stretching device.

Rev Sci Instrum 2015 Jun;86(6):063702

Department of Micro- and Nanotechnology, Technical University of Denmark, Kongens Lyngby, Denmark.

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http://dx.doi.org/10.1063/1.4922068DOI Listing
June 2015

Aberrant expression of miR-218 and miR-204 in human mesial temporal lobe epilepsy and hippocampal sclerosis-convergence on axonal guidance.

Epilepsia 2014 Dec 19;55(12):2017-27. Epub 2014 Nov 19.

Department of Cellular and Molecular Medicine, Wilhelm Johannsen Center for Functional Genome Research, University of Copenhagen, Copenhagen, Denmark; Research Laboratory for Stereology and Neuroscience, Bispebjerg Hospital, Copenhagen, Denmark.

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http://dx.doi.org/10.1111/epi.12839DOI Listing
December 2014

Deficiency of the miR-29a/b-1 cluster leads to ataxic features and cerebellar alterations in mice.

Neurobiol Dis 2015 Jan 12;73:275-88. Epub 2014 Oct 12.

VIB Center for the Biology of Disease, VIB Leuven 3000 Leuven, Belgium; Center for Human Genetics and Leuven institute for neurodegenerative disorders (LIND), KU Leuven and Universitaire Ziekenhuizen, 3000 Leuven, Belgium; Department of Molecular Neuroscience, UCL Institute of Neurology, WC1N 3BG London, UK. Electronic address:

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http://dx.doi.org/10.1016/j.nbd.2014.10.006DOI Listing
January 2015

Fluorescence in situ hybridization for detection of small RNAs on frozen tissue sections.

Methods Mol Biol 2014 ;1211:95-102

Department of Cellular and Molecular Medicine, Health and Medical Sciences Faculty, University of Copenhagen, 2200, Copenhagen N, Denmark,

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http://dx.doi.org/10.1007/978-1-4939-1459-3_9DOI Listing
May 2015

Epigenetic remodelling and dysregulation of DLGAP4 is linked with early-onset cerebellar ataxia.

Hum Mol Genet 2014 Dec 1;23(23):6163-76. Epub 2014 Jul 1.

Wilhelm Johannsen Centre for Functional Genome Research, Department of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen N DK-2200, Denmark,

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http://dx.doi.org/10.1093/hmg/ddu337DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4222360PMC
December 2014

MicroRNAs in the hypothalamus.

Neuroendocrinology 2013 21;98(4):243-53. Epub 2013 Sep 21.

Department of Neuroscience, Karolinska Institutet, Stockholm, Sweden.

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http://dx.doi.org/10.1159/000355619DOI Listing
November 2014

Centrifugally driven microfluidic disc for detection of chromosomal translocations.

Lab Chip 2012 Nov;12(22):4628-34

Technical University of Denmark, Ørsteds Plads, 345 B, 2800 Kgs. Lyngby, Denmark.

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http://dx.doi.org/10.1039/c2lc40554gDOI Listing
November 2012

Sequence and expression analysis of gaps in human chromosome 20.

Nucleic Acids Res 2012 Aug 17;40(14):6660-72. Epub 2012 Apr 17.

Wilhelm Johannsen Centre for Functional Genome Research, University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen N, Denmark.

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http://dx.doi.org/10.1093/nar/gks302DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3413113PMC
August 2012

Advanced microtechnologies for detection of chromosome abnormalities by fluorescent in situ hybridization.

Biomed Microdevices 2012 Jun;14(3):453-60

Department of Micro- and Nanotechnology, Technical University of Denmark, Ørsteds Plads, 2800, Kgs. Lyngby, Denmark.

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http://dx.doi.org/10.1007/s10544-011-9622-7DOI Listing
June 2012

Cell-specific detection of microRNA expression during cardiomyogenesis by combined in situ hybridization and immunohistochemistry.

J Mol Histol 2011 Aug 5;42(4):289-99. Epub 2011 Jun 5.

Department of Clinical Biochemistry and Pharmacology, Laboratory for Molecular and Cellular Cardiology, Odense University Hospital, Odense, Denmark.

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http://dx.doi.org/10.1007/s10735-011-9332-8DOI Listing
August 2011

MicroRNAs, epigenetics and disease.

Essays Biochem 2010 Sep;48(1):165-85

Wilhelm Johannsen Centre for Functional Genome Research, Department of Cellular and Molecular Medicine, University of Copenhagen, Blegdamsvej 3, DK-2200 Copenhagen N, Denmark.

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http://dx.doi.org/10.1042/bse0480165DOI Listing
September 2010

LNA-FISH for detection of microRNAs in frozen sections.

Methods Mol Biol 2010 ;659:165-71

Wilhelm Johannsen Centre for Functional Genome Research, ICMM, The Panum Institute, Copenhagen N, Denmark.

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http://dx.doi.org/10.1007/978-1-60761-789-1_11DOI Listing
December 2010

A cohort of balanced reciprocal translocations associated with dyslexia: identification of two putative candidate genes at DYX1.

Behav Genet 2011 Jan 27;41(1):125-33. Epub 2010 Aug 27.

Wilhelm Johannsen Centre for Functional Genome Research, Department of Cellular and Molecular Medicine, University of Copenhagen, Blegdamsvej 3, 2200 Copenhagen N, Denmark.

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http://dx.doi.org/10.1007/s10519-010-9389-2DOI Listing
January 2011

Single-molecule denaturation mapping of DNA in nanofluidic channels.

Proc Natl Acad Sci U S A 2010 Jul 7;107(30):13294-9. Epub 2010 Jul 7.

Department of Physics, McGill University, Montreal, QC, Canada.

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http://dx.doi.org/10.1073/pnas.1007081107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2922186PMC
July 2010

Diagnostic and prognostic microRNAs in stage II colon cancer.

Cancer Res 2008 Aug;68(15):6416-24

Department of Clinical Biochemistry, Molecular Diagnostic Laboratory, Aarhus University Hospital, Aarhus N, Denmark.

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http://dx.doi.org/10.1158/0008-5472.CAN-07-6110DOI Listing
August 2008

Loss of microRNA cluster miR-29a/b-1 in sporadic Alzheimer's disease correlates with increased BACE1/beta-secretase expression.

Proc Natl Acad Sci U S A 2008 Apr 23;105(17):6415-20. Epub 2008 Apr 23.

Center for Human Genetics, Katholieke Universiteit Leuven and Department of Molecular and Developmental Genetics, VIB, Herestraat 49 bus 602, B-3000 Leuven, Belgium.

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http://dx.doi.org/10.1073/pnas.0710263105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2359789PMC
April 2008

The utility of LNA in microRNA-based cancer diagnostics and therapeutics.

Semin Cancer Biol 2008 Apr 15;18(2):89-102. Epub 2008 Jan 15.

Wilhelm Johannsen Centre for Functional Genome Research, Department of Cellular and Molecular Medicine, University of Copenhagen, Blegdamsvej 3, DK-2200 Copenhagen, Denmark.

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http://dx.doi.org/10.1016/j.semcancer.2008.01.004DOI Listing
April 2008

MicroRNA expression in the adult mouse central nervous system.

RNA 2008 Mar 29;14(3):432-44. Epub 2008 Jan 29.

Wilhelm Johannsen Center for Functional Genome Research, Department of Cellular and Molecular Medicine, University of Copenhagen, DK-2200 Copenhagen N, Denmark.

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http://dx.doi.org/10.1261/rna.783108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2248253PMC
March 2008

Altered MicroRNA expression confined to specific epithelial cell subpopulations in breast cancer.

Cancer Res 2007 Dec;67(24):11612-20

Department of Biochemistry, Dartmouth Medical School, Hanover, New Hampshire, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-07-5019DOI Listing
December 2007

Detection of microRNAs in frozen tissue sections by fluorescence in situ hybridization using locked nucleic acid probes and tyramide signal amplification.

Nat Protoc 2007 ;2(10):2520-8

Wilhelm Johannsen Centre for Functional Genome Research, Department of Cellular and Molecular Medicine, University of Copenhagen, Blegdamsvej 3, DK-2200 Copenhagen N, Denmark.

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http://dx.doi.org/10.1038/nprot.2007.313DOI Listing
January 2008

FISHing with locked nucleic acids (LNA): evaluation of different LNA/DNA mixmers.

Mol Cell Probes 2003 Aug;17(4):165-9

Wilhelm Johannsen Centre for Functional Genome Research, Department of Medical Genetics, IMBG, The Panum Institute, University of Copenhagen, Building 24.4, Blegdamsvej 3, 2200, Copenhagen N, Denmark.

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http://dx.doi.org/10.1016/s0890-8508(03)00048-3DOI Listing
August 2003

Human CCS gene: genomic organization and exclusion as a candidate for amyotrophic lateral sclerosis (ALS).

BMC Genet 2002 Apr 19;3. Epub 2002 Apr 19.

Wilhelm Johannsen Centre for Functional Genome Research, Department of Medical Genetics, IMBG, The Panum Institute, University of Copenhagen, Copenhagen, Denmark.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC107843PMC
http://dx.doi.org/10.1186/1471-2156-3-5DOI Listing
April 2002