Asim Siddiqui

Asim Siddiqui

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Asim Siddiqui

Asim Siddiqui

Publications by authors named "Asim Siddiqui"

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51Publications

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Hydrazonophenol, a Food Vacuole-Targeted and Ferriprotoporphyrin IX-Interacting Chemotype Prevents Drug-Resistant Malaria.

ACS Infect Dis 2019 01 7;5(1):63-73. Epub 2018 Dec 7.

Division of Infectious Diseases and Immunology , CSIR - Indian Institute of Chemical Biology , 4 Raja S. C. Mullick Road , Jadavpur, Kolkata 700032 , West Bengal , India.

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http://dx.doi.org/10.1021/acsinfecdis.8b00178DOI Listing
January 2019

Intravascular Papillary Endothelial Hyperplasia (Masson's Tumor) Involving the Knee Synovium.

J Orthop Case Rep 2018 Mar-Apr;8(2):23-25

Department of Trauma and Orthopaedic, Calderdale and Huddersfield NHS Trust, UK.

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http://dx.doi.org/10.13107/jocr.2250-0685.1032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6114222PMC
September 2018

Detection of retromer assembly in Plasmodium falciparum by immunosensing coupled to Surface Plasmon Resonance.

Biochim Biophys Acta Proteins Proteom 2018 May - Jun;1866(5-6):722-730. Epub 2018 Apr 11.

Division of Infectious Diseases and Immunology, CSIR-Indian Institute of Chemical Biology, 4, Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, West Bengal, India. Electronic address:

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http://dx.doi.org/10.1016/j.bbapap.2018.04.005DOI Listing
July 2018

Acute mental stress induces mitochondrial bioenergetic crisis and hyper-fission along with aberrant mitophagy in the gut mucosa in rodent model of stress-related mucosal disease.

Free Radic Biol Med 2017 12 7;113:424-438. Epub 2017 Oct 7.

Division of Infectious Diseases and Immunology, CSIR-Indian Institute of Chemical Biology, 4, Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, West Bengal, India. Electronic address:

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http://dx.doi.org/10.1016/j.freeradbiomed.2017.10.009DOI Listing
December 2017

Antimalarial Activity of Small-Molecule Benzothiazole Hydrazones.

Antimicrob Agents Chemother 2016 07 20;60(7):4217-28. Epub 2016 Jun 20.

Division of Infectious Diseases and Immunology, CSIR-Indian Institute of Chemical Biology, Jadavpur, Kolkata, West Bengal, India

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http://dx.doi.org/10.1128/AAC.01575-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4914622PMC
July 2016

Expression, purification and characterization of Plasmodium falciparum vacuolar protein sorting 29.

Protein Expr Purif 2016 Apr 12;120:7-15. Epub 2015 Dec 12.

Department of Infectious Diseases and Immunology, CSIR-Indian Institute of Chemical Biology, 4 Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, West Bengal, India. Electronic address:

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http://dx.doi.org/10.1016/j.pep.2015.12.004DOI Listing
April 2016

Quantifying the problem of kneeling after a two incision bone tendon bone arthroscopic anterior cruciate ligament reconstruction.

Muscles Ligaments Tendons J 2015 Jul-Sep;5(3):181-6. Epub 2015 Oct 20.

Department of Orthopaedics and Trauma Surgery, Calderdale and Huddersfield Foundation NHS Trust, Huddersfield, UK.

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http://dx.doi.org/10.11138/mltj/2015.5.3.181DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4617218PMC
November 2015

Ellagic Acid, a Dietary Polyphenol, Inhibits Tautomerase Activity of Human Macrophage Migration Inhibitory Factor and Its Pro-inflammatory Responses in Human Peripheral Blood Mononuclear Cells.

J Agric Food Chem 2015 May 15;63(20):4988-98. Epub 2015 May 15.

†Division of Infectious Diseases and Immunology, CSIR-Indian Institute of Chemical Biology, 4, Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, West Bengal, India.

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http://dx.doi.org/10.1021/acs.jafc.5b00921DOI Listing
May 2015

Humoral immune responses to a recombinant Plasmodium vivax tryptophan-rich antigen among Plasmodium vivax-infected patients and its localization in the parasite.

Appl Biochem Biotechnol 2015 Feb 3;175(4):2166-77. Epub 2014 Dec 3.

Community Health Sciences Department, College of Applied Medical Sciences, King Saud University, P.O. Box 10219, Riyadh, 11433, Kingdom of Saudi Arabia,

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http://link.springer.com/10.1007/s12010-014-1428-7
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http://dx.doi.org/10.1007/s12010-014-1428-7DOI Listing
February 2015

Association of heme oxygenase 1 with the restoration of liver function after damage in murine malaria by Plasmodium yoelii.

Infect Immun 2014 Aug 12;82(8):3113-26. Epub 2014 May 12.

Department of Infectious Diseases and Immunology, CSIR-Indian Institute of Chemical Biology, Jadavpur, Kolkata, West Bengal, India

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http://dx.doi.org/10.1128/IAI.01598-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4136231PMC
August 2014

Effect of pentosans addition on pasting properties of flours of eight hard white spring wheat cultivars.

J Food Sci Technol 2014 Jun 3;51(6):1066-75. Epub 2012 Feb 3.

Department of Food Science & Technology, University of Karachi, Karachi, Pakistan 75270.

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http://dx.doi.org/10.1007/s13197-012-0629-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4033747PMC
June 2014

Perturbation of interaction networks for application to cancer therapy.

Cancer Inform 2007 1;5:45-65. Epub 2007 Apr 1.

Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2666951PMC
May 2010

mRNA-sequencing whole transcriptome analysis of a single cell on the SOLiD system.

J Biomol Tech 2009 Dec;20(5):266-71

Applied Biosystems, a division of Life Technologies Corporation, Genetic Analysis Business Unit, Foster City, California 94404, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2777344PMC
December 2009

mRNA-Seq whole-transcriptome analysis of a single cell.

Nat Methods 2009 May 6;6(5):377-82. Epub 2009 Apr 6.

Wellcome Trust-Cancer Research UK Gurdon Institute of Cancer and Developmental Biology, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1038/nmeth.1315DOI Listing
May 2009

Expression, purification, and characterization of the immunological response to a 40-kilodalton Plasmodium vivax tryptophan-rich antigen.

Infect Immun 2008 Jun 24;76(6):2576-86. Epub 2008 Mar 24.

Department of Biotechnology, All India Institute of Medical Sciences, New Delhi 110029, India.

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http://dx.doi.org/10.1128/IAI.00677-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2423051PMC
June 2008

Expression and purification of a Plasmodium vivax antigen - PvTARAg55 tryptophan- and alanine-rich antigen and its immunological responses in human subjects.

Vaccine 2007 Dec 9;26(1):96-107. Epub 2007 Nov 9.

Department of Biotechnology, All India Institute of Medical Sciences, Ansari Nagar, New Delhi 110029, India.

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http://linkinghub.elsevier.com/retrieve/pii/S0264410X0701222
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http://dx.doi.org/10.1016/j.vaccine.2007.10.042DOI Listing
December 2007

Expression and purification of HtpX-like small heat shock integral membrane protease of an unknown organism related to Methylobacillus flagellatus.

J Biochem Biophys Methods 2007 Jun 19;70(4):539-46. Epub 2006 Dec 19.

Department of Biotechnology, All India Institute of Medical Sciences, Ansari Nagar, New Delhi-110029, India.

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http://linkinghub.elsevier.com/retrieve/pii/S0165022X0600220
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http://dx.doi.org/10.1016/j.jbbm.2006.12.002DOI Listing
June 2007

DiscoverySpace: an interactive data analysis application.

Genome Biol 2007 ;8(1):R6

Canada's Michael Smith Genome Sciences Centre, British Columbia Cancer Research Centre, British Columbia Cancer Agency, Vancouver, BC, Canada.

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http://dx.doi.org/10.1186/gb-2007-8-1-r6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1839122PMC
April 2007

Prevalence of anti-3-nitrotyrosine antibodies in the joint synovial fluid of patients with rheumatoid arthritis, osteoarthritis and systemic lupus erythematosus.

Clin Chim Acta 2006 Aug 2;370(1-2):100-7. Epub 2006 Mar 2.

Firoz Specialist Hospital, Medical Road, Sir Syed Nagar, Aligarh-202002, U.P. India.

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http://dx.doi.org/10.1016/j.cca.2006.01.020DOI Listing
August 2006

Plasmid DNA acquires immunogenicity on exposure to singlet oxygen.

Biochemistry (Mosc) 2006 Aug;71(8):871-8

Department of Biochemistry, Faculty of Medicine, J. N. Medical College, A. M. U. Aligarh, 202002, India.

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http://dx.doi.org/10.1134/s0006297906080086DOI Listing
August 2006

Sequence biases in large scale gene expression profiling data.

Nucleic Acids Res 2006 Jul 13;34(12):e83. Epub 2006 Jul 13.

Canada's Michael Smith Genome Sciences Centre, British Columbia Cancer Agency, Vancouver, BC, Canada.

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http://dx.doi.org/10.1093/nar/gkl404DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1524917PMC
July 2006

Management and visualization of whole genome shotgun assemblies using SAM.

Biotechniques 2005 May;38(5):715-6, 718, 720

Genome Sciences Centre, Vancouver, BC, Canada.

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http://dx.doi.org/10.2144/05385ST01DOI Listing
May 2005

Genome sequence of the Brown Norway rat yields insights into mammalian evolution.

Authors:
Richard A Gibbs George M Weinstock Michael L Metzker Donna M Muzny Erica J Sodergren Steven Scherer Graham Scott David Steffen Kim C Worley Paula E Burch Geoffrey Okwuonu Sandra Hines Lora Lewis Christine DeRamo Oliver Delgado Shannon Dugan-Rocha George Miner Margaret Morgan Alicia Hawes Rachel Gill Celera Robert A Holt Mark D Adams Peter G Amanatides Holly Baden-Tillson Mary Barnstead Soo Chin Cheryl A Evans Steve Ferriera Carl Fosler Anna Glodek Zhiping Gu Don Jennings Cheryl L Kraft Trixie Nguyen Cynthia M Pfannkoch Cynthia Sitter Granger G Sutton J Craig Venter Trevor Woodage Douglas Smith Hong-Mei Lee Erik Gustafson Patrick Cahill Arnold Kana Lynn Doucette-Stamm Keith Weinstock Kim Fechtel Robert B Weiss Diane M Dunn Eric D Green Robert W Blakesley Gerard G Bouffard Pieter J De Jong Kazutoyo Osoegawa Baoli Zhu Marco Marra Jacqueline Schein Ian Bosdet Chris Fjell Steven Jones Martin Krzywinski Carrie Mathewson Asim Siddiqui Natasja Wye John McPherson Shaying Zhao Claire M Fraser Jyoti Shetty Sofiya Shatsman Keita Geer Yixin Chen Sofyia Abramzon William C Nierman Paul H Havlak Rui Chen K James Durbin Amy Egan Yanru Ren Xing-Zhi Song Bingshan Li Yue Liu Xiang Qin Simon Cawley Kim C Worley A J Cooney Lisa M D'Souza Kirt Martin Jia Qian Wu Manuel L Gonzalez-Garay Andrew R Jackson Kenneth J Kalafus Michael P McLeod Aleksandar Milosavljevic Davinder Virk Andrei Volkov David A Wheeler Zhengdong Zhang Jeffrey A Bailey Evan E Eichler Eray Tuzun Ewan Birney Emmanuel Mongin Abel Ureta-Vidal Cara Woodwark Evgeny Zdobnov Peer Bork Mikita Suyama David Torrents Marina Alexandersson Barbara J Trask Janet M Young Hui Huang Huajun Wang Heming Xing Sue Daniels Darryl Gietzen Jeanette Schmidt Kristian Stevens Ursula Vitt Jim Wingrove Francisco Camara M Mar Albà Josep F Abril Roderic Guigo Arian Smit Inna Dubchak Edward M Rubin Olivier Couronne Alexander Poliakov Norbert Hübner Detlev Ganten Claudia Goesele Oliver Hummel Thomas Kreitler Young-Ae Lee Jan Monti Herbert Schulz Heike Zimdahl Heinz Himmelbauer Hans Lehrach Howard J Jacob Susan Bromberg Jo Gullings-Handley Michael I Jensen-Seaman Anne E Kwitek Jozef Lazar Dean Pasko Peter J Tonellato Simon Twigger Chris P Ponting Jose M Duarte Stephen Rice Leo Goodstadt Scott A Beatson Richard D Emes Eitan E Winter Caleb Webber Petra Brandt Gerald Nyakatura Margaret Adetobi Francesca Chiaromonte Laura Elnitski Pallavi Eswara Ross C Hardison Minmei Hou Diana Kolbe Kateryna Makova Webb Miller Anton Nekrutenko Cathy Riemer Scott Schwartz James Taylor Shan Yang Yi Zhang Klaus Lindpaintner T Dan Andrews Mario Caccamo Michele Clamp Laura Clarke Valerie Curwen Richard Durbin Eduardo Eyras Stephen M Searle Gregory M Cooper Serafim Batzoglou Michael Brudno Arend Sidow Eric A Stone J Craig Venter Bret A Payseur Guillaume Bourque Carlos López-Otín Xose S Puente Kushal Chakrabarti Sourav Chatterji Colin Dewey Lior Pachter Nicolas Bray Von Bing Yap Anat Caspi Glenn Tesler Pavel A Pevzner David Haussler Krishna M Roskin Robert Baertsch Hiram Clawson Terrence S Furey Angie S Hinrichs Donna Karolchik William J Kent Kate R Rosenbloom Heather Trumbower Matt Weirauch David N Cooper Peter D Stenson Bin Ma Michael Brent Manimozhiyan Arumugam David Shteynberg Richard R Copley Martin S Taylor Harold Riethman Uma Mudunuri Jane Peterson Mark Guyer Adam Felsenfeld Susan Old Stephen Mockrin Francis Collins

Nature 2004 Apr;428(6982):493-521

Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, MS BCM226, One Baylor Plaza, Houston, Texas 77030, USA. http://www.hgsc.bcm.tmc.edu

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http://dx.doi.org/10.1038/nature02426DOI Listing
April 2004