Asha A Nair

Recurrent fusions in indolent T-cell lymphoproliferative disorder of the gastrointestinal tract.

• Authors:
• Ayush Sharma,
• Naoki Oishi,
• Rebecca L Boddicker,
• Guangzhen Hu,
• Hailey K Benson,
• Rhett P Ketterling,
• Patricia T Greipp,
• Darlene L Knutson,
• Sara M Kloft-Nelson,
• Rong He,
• Bruce W Eckloff,
• Jin Jen,
• Asha A Nair,
• Jaime I Davila,
• Surendra Dasari,
• Konstantinos N Lazaridis,
• N Nora Bennani,
• Tsung-Teh Wu,
• Grzegorz S Nowakowski,
• Joseph A Murray,
• Andrew L Feldman

• May 2018

Gene Expression Signatures Characterized by Longitudinal Stability and Interindividual Variability Delineate Baseline Phenotypic Groups with Distinct Responses to Immune Stimulation.

• Authors:
• Adam D Scheid,
• Virginia P Van Keulen,
• Sara J Felts,
• Steven C Neier,
• Sumit Middha,
• Asha A Nair,
• Robert W Techentin,
• Barry K Gilbert,
• Jin Jen,
• Claudia Neuhauser,
• Yuji Zhang,
• Larry R Pease

• March 2018

Gastroblastoma harbors a recurrent somatic MALAT1-GLI1 fusion gene.

• Authors:
• Rondell P Graham,
• Asha A Nair,
• Jaime I Davila,
• Long Jin,
• Jin Jen,
• William R Sukov,
• Tsung-Teh Wu,
• Henry D Appelman,
• Jorge Torres-Mora,
• Kyle D Perry,
• Lizhi Zhang,
• Sara M Kloft-Nelson,
• Ryan A Knudson,
• Patricia T Greipp,
• Andrew L Folpe

• October 2017

Network-directed cis-mediator analysis of normal prostate tissue expression profiles reveals downstream regulatory associations of prostate cancer susceptibility loci.

• Authors:
• Nicholas B Larson,
• Shannon K McDonnell,
• Zach Fogarty,
• Melissa C Larson,
• John Cheville,
• Shaun Riska,
• Saurabh Baheti,
• Alexandra M Weber,
• Asha A Nair,
• Liang Wang,
• Daniel O'Brien,
• Jaime Davila,
• Daniel J Schaid,
• Stephen N Thibodeau

• October 2017

The Role of the Histone Methyltransferase Enhancer of Zeste Homolog 2 (EZH2) in the Pathobiological Mechanisms Underlying Inflammatory Bowel Disease (IBD).

• Authors:
• Olga F Sarmento,
• Phyllis A Svingen,
• Yuning Xiong,
• Zhifu Sun,
• Adebowale O Bamidele,
• Angela J Mathison,
• Thomas C Smyrk,
• Asha A Nair,
• Michelle M Gonzalez,
• Mary R Sagstetter,
• Saurabh Baheti,
• Dermot P B McGovern,
• Jessica J Friton,
• Konstantinos A Papadakis,
• Goel Gautam,
• Ramnik J Xavier,
• Raul A Urrutia,
• William A Faubion

• January 2017

Circular RNAs and their associations with breast cancer subtypes.

• Authors:
• Asha A Nair,
• Nifang Niu,
• Xiaojia Tang,
• Kevin J Thompson,
• Liewei Wang,
• Jean-Pierre Kocher,
• Subbaya Subramanian,
• Krishna R Kalari

• December 2016

Retinoblastoma Binding Protein 4 Modulates Temozolomide Sensitivity in Glioblastoma by Regulating DNA Repair Proteins.

• Authors:
• Gaspar J Kitange,
• Ann C Mladek,
• Mark A Schroeder,
• Jenny C Pokorny,
• Brett L Carlson,
• Yuji Zhang,
• Asha A Nair,
• Jeong-Heon Lee,
• Huihuang Yan,
• Paul A Decker,
• Zhiguo Zhang,
• Jann N Sarkaria

• March 2016

A cell cycle-dependent BRCA1-UHRF1 cascade regulates DNA double-strand break repair pathway choice.

• Authors:
• Haoxing Zhang,
• Hailong Liu,
• Yali Chen,
• Xu Yang,
• Panfei Wang,
• Tongzheng Liu,
• Min Deng,
• Bo Qin,
• Cristina Correia,
• Seungbaek Lee,
• Jungjin Kim,
• Melanie Sparks,
• Asha A Nair,
• Debra L Evans,
• Krishna R Kalari,
• Pumin Zhang,
• Liewei Wang,
• Zhongsheng You,
• Scott H Kaufmann,
• Zhenkun Lou,
• Huadong Pei

• January 2016

Nonbiased Molecular Screening Identifies Novel Molecular Regulators of Fibrogenic and Proliferative Signaling in Myxomatous Mitral Valve Disease.

• Authors:
• Nassir M Thalji,
• Michael A Hagler,
• Heyu Zhang,
• Grace Casaclang-Verzosa,
• Asha A Nair,
• Rakesh M Suri,
• Jordan D Miller

• June 2015

Comprehensively evaluating cis-regulatory variation in the human prostate transcriptome by using gene-level allele-specific expression.

• Authors:
• Nicholas B Larson,
• Shannon McDonnell,
• Amy J French,
• Zach Fogarty,
• John Cheville,
• Sumit Middha,
• Shaun Riska,
• Saurabh Baheti,
• Asha A Nair,
• Liang Wang,
• Daniel J Schaid,
• Stephen N Thibodeau

• June 2015

High-resolution molecular validation of self-renewal and spontaneous differentiation in clinical-grade adipose-tissue derived human mesenchymal stem cells.

• Authors:
• Amel Dudakovic,
• Emily Camilleri,
• Scott M Riester,
• Eric A Lewallen,
• Sergiy Kvasha,
• Xiaoyue Chen,
• Darcie J Radel,
• Jarett M Anderson,
• Asha A Nair,
• Jared M Evans,
• Aaron J Krych,
• Jay Smith,
• David R Deyle,
• Janet L Stein,
• Gary S Stein,
• Hee-Jeong Im,
• Simon M Cool,
• Jennifer J Westendorf,
• Sanjeev Kakar,
• Allan B Dietz,
• Andre J van Wijnen

• October 2014

RNA sequencing shows transcriptomic changes in rectosigmoid mucosa in patients with irritable bowel syndrome-diarrhea: a pilot case-control study.

• Authors:
• Michael Camilleri,
• Paula Carlson,
• Andres Acosta,
• Irene Busciglio,
• Asha A Nair,
• Simon J Gibbons,
• Gianrico Farrugia,
• Eric W Klee

• June 2014

MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing.

• Authors:
• Krishna R Kalari,
• Asha A Nair,
• Jaysheel D Bhavsar,
• Daniel R O'Brien,
• Jaime I Davila,
• Matthew A Bockol,
• Jinfu Nie,
• Xiaojia Tang,
• Saurabh Baheti,
• Jay B Doughty,
• Sumit Middha,
• Hugues Sicotte,
• Aubrey E Thompson,
• Yan W Asmann,
• Jean-Pierre A Kocher

• June 2014

Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma.

• Authors:
• Mitesh J Borad,
• Mia D Champion,
• Jan B Egan,
• Winnie S Liang,
• Rafael Fonseca,
• Alan H Bryce,
• Ann E McCullough,
• Michael T Barrett,
• Katherine Hunt,
• Maitray D Patel,
• Scott W Young,
• Joseph M Collins,
• Alvin C Silva,
• Rachel M Condjella,
• Matthew Block,
• Robert R McWilliams,
• Konstantinos N Lazaridis,
• Eric W Klee,
• Keith C Bible,
• Pamela Harris,
• Gavin R Oliver,
• Jaysheel D Bhavsar,
• Asha A Nair,
• Sumit Middha,
• Yan Asmann,
• Jean-Pierre Kocher,
• Kimberly Schahl,
• Benjamin R Kipp,
• Emily G Barr Fritcher,
• Angela Baker,
• Jessica Aldrich,
• Ahmet Kurdoglu,
• Tyler Izatt,
• Alexis Christoforides,
• Irene Cherni,
• Sara Nasser,
• Rebecca Reiman,
• Lori Phillips,
• Jackie McDonald,
• Jonathan Adkins,
• Stephen D Mastrian,
• Pamela Placek,
• Aprill T Watanabe,
• Janine Lobello,
• Haiyong Han,
• Daniel Von Hoff,
• David W Craig,
• A Keith Stewart,
• John D Carpten

• February 2014

Novel late-onset Alzheimer disease loci variants associate with brain gene expression.

• Authors:
• Mariet Allen,
• Fanggeng Zou,
• High Seng Chai,
• Curtis S Younkin,
• Julia Crook,
• V Shane Pankratz,
• Minerva M Carrasquillo,
• Christopher N Rowley,
• Asha A Nair,
• Sumit Middha,
• Sooraj Maharjan,
• Thuy Nguyen,
• Li Ma,
• Kimberly G Malphrus,
• Ryan Palusak,
• Sarah Lincoln,
• Gina Bisceglio,
• Constantin Georgescu,
• Debra Schultz,
• Fariborz Rakhshan,
• Christopher P Kolbert,
• Jin Jen,
• Jonathan L Haines,
• Richard Mayeux,
• Margaret A Pericak-Vance,
• Lindsay A Farrer,
• Gerard D Schellenberg,
• Ronald C Petersen,
• Neill R Graff-Radford,
• Dennis W Dickson,
• Steven G Younkin,
• Nilüfer Ertekin-Taner,
• ,
• Liana G Apostolova,
• Steven E Arnold,
• Clinton T Baldwin,
• Robert Barber,
• Michael M Barmada,
• Thomas Beach,
• Gary W Beecham,
• Duane Beekly,
• David A Bennett,
• Eileen H Bigio,
• Thomas D Bird,
• Deborah Blacker,
• Bradley F Boeve,
• James D Bowen,
• Adam Boxer,
• James R Burke,
• Jacqueline Buros,
• Joseph D Buxbaum,
• Nigel J Cairns,
• Laura B Cantwell,
• Chuanhai Cao,
• Chris S Carlson,
• Regina M Carney,
• Steven L Carroll,
• Helena C Chui,
• David G Clark,
• Jason Corneveaux,
• Carl W Cotman,
• Paul K Crane,
• Carlos Cruchaga,
• Jeffrey L Cummings,
• Philip L De Jager,
• Charles DeCarli,
• Steven T DeKosky,
• F Yesim Demirci,
• Ramon Diaz-Arrastia,
• Malcolm Dick,
• Beth A Dombroski,
• Ranjan Duara,
• William D Ellis,
• Denis Evans,
• Kelley M Faber,
• Kenneth B Fallon,
• Martin R Farlow,
• Steven Ferris,
• Tatiana M Foroud,
• Matthew Frosch,
• Douglas R Galasko,
• Paul J Gallins,
• Mary Ganguli,
• Marla Gearing,
• Daniel H Geschwind,
• Bernardino Ghetti,
• John R Gilbert,
• Sid Gilman,
• Bruno Giordani,
• Jonathan D Glass,
• Alison M Goate,
• Robert C Green,
• John H Growdon,
• Hakon Hakonarson,
• Ronald L Hamilton,
• John Hardy,
• Lindy E Harrell,
• Elizabeth Head,
• Lawrence S Honig,
• Matthew J Huentelman,
• Christine M Hulette,
• Bradley T Hyman,
• Gail P Jarvik,
• Gregory A Jicha,
• Lee-Way Jin,
• Gyungah Jun,
• M Ilyas Kamboh,
• Jason Karlawish,
• Anna Karydas,
• John S K Kauwe,
• Jeffrey A Kaye,
• Nancy Kennedy,
• Ronald Kim,
• Edward H Koo,
• Neil W Kowall,
• Patricia Kramer,
• Walter A Kukull,
• James J Lah,
• Eric B Larson,
• Allan I Levey,
• Andrew P Lieberman,
• Oscar L Lopez,
• Kathryn L Lunetta,
• Wendy J Mack,
• Daniel C Marson,
• Eden R Martin,
• Frank Martiniuk,
• Deborah C Mash,
• Eliezer Masliah,
• Wayne C McCormick,
• Susan M McCurry,
• Andrew N McDavid,
• Ann C McKee,
• Marsel Mesulam,
• Bruce L Miller,
• Carol A Miller,
• Joshua W Miller,
• Thomas J Montine,
• John C Morris,
• Amanda J Myers,
• Adam C Naj,
• Petra Nowotny,
• Joseph E Parisi,
• Daniel P Perl,
• Elaine Peskind,
• Wayne W Poon,
• Huntington Potter,
• Joseph F Quinn,
• Ashok Raj,
• Ruchita A Rajbhandary,
• Murray Raskind,
• Eric M Reiman,
• Barry Reisberg,
• Christiane Reitz,
• John M Ringman,
• Erik D Roberson,
• Ekaterina Rogaeva,
• Roger N Rosenberg,
• Mary Sano,
• Andrew J Saykin,
• Julie A Schneider,
• Lon S Schneider,
• William Seeley,
• Michael L Shelanski,
• Michael A Slifer,
• Charles D Smith,
• Joshua A Sonnen,
• Salvatore Spina,
• Peter St George-Hyslop,
• Robert A Stern,
• Rudolph E Tanzi,
• John Q Trojanowski,
• Juan C Troncoso,
• Debby W Tsuang,
• Vivianna M Van Deerlin,
• Badri Narayan Vardarajan,
• Harry V Vinters,
• Jean Paul Vonsattel,
• Li-San Wang,
• Sandra Weintraub,
• Kathleen A Welsh-Bohmer,
• Jennifer Williamson,
• Randall L Woltjer

• July 2012

Glutathione S-transferase omega genes in Alzheimer and Parkinson disease risk, age-at-diagnosis and brain gene expression: an association study with mechanistic implications.

• Authors:
• Mariet Allen,
• Fanggeng Zou,
• High Seng Chai,
• Curtis S Younkin,
• Richard Miles,
• Asha A Nair,
• Julia E Crook,
• V Shane Pankratz,
• Minerva M Carrasquillo,
• Christopher N Rowley,
• Thuy Nguyen,
• Li Ma,
• Kimberly G Malphrus,
• Gina Bisceglio,
• Alexandra I Ortolaza,
• Ryan Palusak,
• Sumit Middha,
• Sooraj Maharjan,
• Constantin Georgescu,
• Debra Schultz,
• Fariborz Rakhshan,
• Christopher P Kolbert,
• Jin Jen,
• Sigrid B Sando,
• Jan O Aasly,
• Maria Barcikowska,
• Ryan J Uitti,
• Zbigniew K Wszolek,
• Owen A Ross,
• Ronald C Petersen,
• Neill R Graff-Radford,
• Dennis W Dickson,
• Steven G Younkin,
• Nilüfer Ertekin-Taner

• April 2012

Homozygosity mapping and exome sequencing reveal GATAD1 mutation in autosomal recessive dilated cardiomyopathy.

• Authors:
• Jeanne L Theis,
• Katharine M Sharpe,
• Martha E Matsumoto,
• High Seng Chai,
• Asha A Nair,
• Jason D Theis,
• Mariza de Andrade,
• Eric D Wieben,
• Virginia V Michels,
• Timothy M Olson

• December 2011

The ability of biomarkers to predict systemic progression in men with high-risk prostate cancer treated surgically is dependent on ERG status.

• Authors:
• R Jeffrey Karnes,
• John C Cheville,
• Cristiane M Ida,
• Thomas J Sebo,
• Asha A Nair,
• Hui Tang,
• Jan-Marie Munz,
• Farhad Kosari,
• George Vasmatzis

• November 2010

Brain expression genome-wide association study (eGWAS) identifies human disease-associated variants.

• Authors:
• Fanggeng Zou,
• High Seng Chai,
• Curtis S Younkin,
• Mariet Allen,
• Julia Crook,
• V Shane Pankratz,
• Minerva M Carrasquillo,
• Christopher N Rowley,
• Asha A Nair,
• Sumit Middha,
• Sooraj Maharjan,
• Thuy Nguyen,
• Li Ma,
• Kimberly G Malphrus,
• Ryan Palusak,
• Sarah Lincoln,
• Gina Bisceglio,
• Constantin Georgescu,
• Naomi Kouri,
• Christopher P Kolbert,
• Jin Jen,
• Jonathan L Haines,
• Richard Mayeux,
• Margaret A Pericak-Vance,
• Lindsay A Farrer,
• Gerard D Schellenberg,
• ,
• Ronald C Petersen,
• Neill R Graff-Radford,
• Dennis W Dickson,
• Steven G Younkin,
• Nilüfer Ertekin-Taner

Network-based analysis reveals distinct association patterns in a semantic MEDLINE-based drug-disease-gene network.

• Authors:
• Yuji Zhang,
• Cui Tao,
• Guoqian Jiang,
• Asha A Nair,
• Jian Su,
• Christopher G Chute,
• Hongfang Liu

BBBomics-Human Blood Brain Barrier Transcriptomics Hub.

• Authors:
• Krishna R Kalari,
• Kevin J Thompson,
• Asha A Nair,
• Xiaojia Tang,
• Matthew A Bockol,
• Navya Jhawar,
• Suresh K Swaminathan,
• Val J Lowe,
• Karunya K Kandimalla

Impact of RNA degradation on fusion detection by RNA-seq.

• Authors:
• Jaime I Davila,
• Numrah M Fadra,
• Xiaoke Wang,
• Amber M McDonald,
• Asha A Nair,
• Barbara R Crusan,
• Xianglin Wu,
• Joseph H Blommel,
• Jin Jen,
• Kandelaria M Rumilla,
• Robert B Jenkins,
• Umut Aypar,
• Eric W Klee,
• Benjamin R Kipp,
• Kevin C Halling