Arjun Raj

Arjun Raj

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Arjun Raj

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Illuminating Genomic Dark Matter with RNA Imaging.

Cold Spring Harb Perspect Biol 2019 May 1;11(5). Epub 2019 May 1.

Department of Biochemistry, University of Colorado Boulder and BioFrontiers Institute, Boulder, Colorado 80303.

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http://dx.doi.org/10.1101/cshperspect.a032094DOI Listing
May 2019

Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.

Mol Cell 2019 02 13;73(3):519-532.e4. Epub 2018 Dec 13.

Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104, USA; Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2018.11.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6368450PMC
February 2019

Allele-specific RNA imaging shows that allelic imbalances can arise in tissues through transcriptional bursting.

PLoS Genet 2019 01 9;15(1):e1007874. Epub 2019 Jan 9.

Department of Bioengineering, University of Pennsylvania, Skirkanich Hall, Philadelphia, Pennsylvania, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1007874DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342324PMC
January 2019

Quanti.us: a tool for rapid, flexible, crowd-based annotation of images.

Nat Methods 2018 08 31;15(8):587-590. Epub 2018 Jul 31.

Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA, USA.

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http://www.nature.com/articles/s41592-018-0069-0
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http://dx.doi.org/10.1038/s41592-018-0069-0DOI Listing
August 2018

SAVER: gene expression recovery for single-cell RNA sequencing.

Nat Methods 2018 07 25;15(7):539-542. Epub 2018 Jun 25.

Department of Statistics, The Wharton School, University of Pennsylvania, Philadelphia, PA, USA.

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http://www.nature.com/articles/s41592-018-0033-z
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http://dx.doi.org/10.1038/s41592-018-0033-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6030502PMC
July 2018

Gene expression distribution deconvolution in single-cell RNA sequencing.

Proc Natl Acad Sci U S A 2018 07 26;115(28):E6437-E6446. Epub 2018 Jun 26.

Department of Statistics, University of Pennsylvania, Philadelphia, PA 19104;

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http://dx.doi.org/10.1073/pnas.1721085115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6048536PMC
July 2018

Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH.

Cell Syst 2018 Feb 14;6(2):171-179.e5. Epub 2018 Feb 14.

Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA; Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cels.2018.01.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6078200PMC
February 2018

Intercellular mRNA trafficking via membrane nanotube-like extensions in mammalian cells.

Proc Natl Acad Sci U S A 2017 11 24;114(46):E9873-E9882. Epub 2017 Oct 24.

Department of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, NY 10461;

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http://dx.doi.org/10.1073/pnas.1706365114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5699038PMC
November 2017

Mitotic transcription and waves of gene reactivation during mitotic exit.

Science 2017 10 14;358(6359):119-122. Epub 2017 Sep 14.

Institute for Regenerative Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-5157, USA.

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http://dx.doi.org/10.1126/science.aal4671DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727891PMC
October 2017

Replication defective viral genomes exploit a cellular pro-survival mechanism to establish paramyxovirus persistence.

Nat Commun 2017 10 6;8(1):799. Epub 2017 Oct 6.

Department of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.

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http://dx.doi.org/10.1038/s41467-017-00909-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5630589PMC
October 2017

A magnetic micropore chip for rapid (<1 hour) unbiased circulating tumor cell isolation and in situ RNA analysis.

Lab Chip 2017 09;17(18):3086-3096

Department of Bioengineering, School of Engineering and Applied Sciences, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1039/c7lc00703eDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5612367PMC
September 2017

Group 1 Innate Lymphoid Cell Lineage Identity Is Determined by a cis-Regulatory Element Marked by a Long Non-coding RNA.

Immunity 2017 09;47(3):435-449.e8

Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Institute for Immunology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Division of Transplant Immunology, Department of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address:

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http://dx.doi.org/10.1016/j.immuni.2017.08.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5761663PMC
September 2017

Visualizing adenosine-to-inosine RNA editing in single mammalian cells.

Nat Methods 2017 Aug 12;14(8):801-804. Epub 2017 Jun 12.

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1038/nmeth.4332DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5542810PMC
August 2017

The BET Protein BRD2 Cooperates with CTCF to Enforce Transcriptional and Architectural Boundaries.

Mol Cell 2017 Apr;66(1):102-116.e7

Division of Hematology, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA; Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2017.02.027DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5393350PMC
April 2017

FISHing Out the Details of CRISPR Genome Tracks.

Biophys J 2017 03;112(6):1045-1046

Cell and Molecular Biology Graduate Group and Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania. Electronic address:

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http://dx.doi.org/10.1016/j.bpj.2017.02.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5375143PMC
March 2017

Systems biology: Molecular memoirs of a cellular family.

Nature 2017 01 14;541(7635):38-39. Epub 2016 Dec 14.

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1038/nature21101DOI Listing
January 2017

Nanoscale imaging of RNA with expansion microscopy.

Nat Methods 2016 08 4;13(8):679-84. Epub 2016 Jul 4.

Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1038/nmeth.3899DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4965288PMC
August 2016

A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition.

Genes Dev 2016 06;30(12):1423-39

Division of Hematology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania 19104, USA; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1101/gad.280859.116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4926865PMC
June 2016

Enhancer Regulation of Transcriptional Bursting Parameters Revealed by Forced Chromatin Looping.

Mol Cell 2016 04 7;62(2):237-247. Epub 2016 Apr 7.

Division of Hematology, Children's Hospital of Pennsylvania, Philadelphia, PA 19104, USA; Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2016.03.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4842148PMC
April 2016

Single-cell differences in matrix gene expression do not predict matrix deposition.

Nat Commun 2016 Mar 3;7:10865. Epub 2016 Mar 3.

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1038/ncomms10865DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4782061PMC
March 2016

Visualizing allele-specific expression in single cells reveals epigenetic mosaicism in an H19 loss-of-imprinting mutant.

Genes Dev 2016 Mar;30(5):567-78

Department of Bioengineering, University of Pennsylvania, Skirkanich Hall, Philadelphia, Pennsylvania 19104, USA;

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http://dx.doi.org/10.1101/gad.275958.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4782050PMC
March 2016

Overlapping cell population expression profiling and regulatory inference in C. elegans.

BMC Genomics 2016 Feb 29;17:159. Epub 2016 Feb 29.

Department of Genetics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1186/s12864-016-2482-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4772325PMC
February 2016

Half dozen of one, six billion of the other: What can small- and large-scale molecular systems biology learn from one another?

Genome Res 2015 Oct;25(10):1466-72

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6321, USA.

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http://genome.cshlp.org/lookup/doi/10.1101/gr.190579.115
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http://dx.doi.org/10.1101/gr.190579.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4579331PMC
October 2015

Dynamic enhancer-gene body contacts during transcription elongation.

Genes Dev 2015 Oct;29(19):1992-7

Division of Hematology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania 19104, USA; Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA;

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http://dx.doi.org/10.1101/gad.255265.114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4604340PMC
October 2015

Visualization of lncRNA by single-molecule fluorescence in situ hybridization.

Methods Mol Biol 2015 ;1262:3-19

Department of Bioengineering, University of Pennsylvania, 210 S. 33rd St., Philadelphia, PA, 19104-6321, USA.

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http://link.springer.com/10.1007/978-1-4939-2253-6_1
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http://dx.doi.org/10.1007/978-1-4939-2253-6_1DOI Listing
September 2015

Robust hematopoietic progenitor cell commitment in the presence of a conflicting cue.

J Cell Sci 2015 Aug 9;128(16):3009-17. Epub 2015 Jul 9.

Department of Biomedical Engineering, College of Science and Engineering, University of Minnesota, Minneapolis, MN 55455, USA

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http://dx.doi.org/10.1242/jcs.158436DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4541040PMC
August 2015

Heterogeneous lineage marker expression in naive embryonic stem cells is mostly due to spontaneous differentiation.

Sci Rep 2015 Aug 21;5:13339. Epub 2015 Aug 21.

Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1038/srep13339DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4544010PMC
August 2015

The Bicoid class homeodomain factors ceh-36/OTX and unc-30/PITX cooperate in C. elegans embryonic progenitor cells to regulate robust development.

PLoS Genet 2015 Mar 4;11(3):e1005003. Epub 2015 Mar 4.

Department of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America; Penn Genome Frontiers Institute, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1005003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4349592PMC
March 2015

Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution.

Genome Biol 2015 Jan 29;16:20. Epub 2015 Jan 29.

School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, PA, 19104, USA.

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http://dx.doi.org/10.1186/s13059-015-0586-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4369099PMC
January 2015

Using variability in gene expression as a tool for studying gene regulation.

Wiley Interdiscip Rev Syst Biol Med 2013 Nov-Dec;5(6):751-9. Epub 2013 Aug 29.

Department of Physics, University of Pennsylvania, Philadelphia, PA, USA.

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http://dx.doi.org/10.1002/wsbm.1243DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4561544PMC
October 2014

Nup98 promotes antiviral gene expression to restrict RNA viral infection in Drosophila.

Proc Natl Acad Sci U S A 2014 Sep 2;111(37):E3890-9. Epub 2014 Sep 2.

Department of Microbiology, Penn Genome Frontiers Institute, University of Pennsylvania, Philadelphia, PA 19104

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http://dx.doi.org/10.1073/pnas.1410087111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4169978PMC
September 2014

Stochastic NANOG fluctuations allow mouse embryonic stem cells to explore pluripotency.

Development 2014 Jul;141(14):2770-9

Instituto de Medicina Molecular and Instituto de Histologia e Biologia do Desenvolvimento, Faculdade de Medicina da Universidade de Lisboa, Avenida Prof. Egas Moniz, Lisboa 1649-028, Portugal Champalimaud Neuroscience Programme, Champalimaud Centre for the Unknown, Avenida Brasilia - Doca de Pedrouços, Lisboa 1400-038, Portugal

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http://dx.doi.org/10.1242/dev.108910DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6517831PMC
July 2014

LincRNA-p21 activates p21 in cis to promote Polycomb target gene expression and to enforce the G1/S checkpoint.

Mol Cell 2014 Jun 22;54(5):777-90. Epub 2014 May 22.

Koch Institute for Integrative Cancer Research and Department of Biology, Massachusetts Institute of Technology, 500 Main Street, Cambridge, MA 02142, USA; Howard Hughes Medical Institute, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2014.04.025DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103188PMC
June 2014

RNA sequencing in situ.

Nat Biotechnol 2014 Jun;32(6):543-4

University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1038/nbt.2921DOI Listing
June 2014

Turbo FISH: a method for rapid single molecule RNA FISH.

PLoS One 2013 16;8(9):e75120. Epub 2013 Sep 16.

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0075120PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774626PMC
May 2014

Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.

Nat Struct Mol Biol 2014 Feb 26;21(2):198-206. Epub 2014 Jan 26.

1] Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA. [2] Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts, USA. [3] Department of Pathology, Beth Israel Deaconess Medical Center, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1038/nsmb.2764DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3950333PMC
February 2014

Visualizing SNVs to quantify allele-specific expression in single cells.

Nat Methods 2013 Sep 4;10(9):865-7. Epub 2013 Aug 4.

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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http://rajlab.seas.upenn.edu/pdfs/LevesqueNatMeth2013b.pdf
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http://www.nature.com/doifinder/10.1038/nmeth.2589
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http://dx.doi.org/10.1038/nmeth.2589DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3771873PMC
September 2013

Quantitative assessment of ratiometric bimolecular beacons as a tool for imaging single engineered RNA transcripts and measuring gene expression in living cells.

Nucleic Acids Res 2013 Aug 27;41(15):e152. Epub 2013 Jun 27.

Department of Bioengineering, University of Pennsylvania, 210 S. 33rd Street, 240 Skirkanich Hall, Philadelphia, PA 19104, USA, Department of Biology, University of Pennsylvania, 433 S. University Ave, 102 Leidy Laboratories, Philadelphia, PA 19104, USA and Integrated DNA Technologies, Inc., 1710 Commercial Park, Coralville, IA 52241, USA.

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http://dx.doi.org/10.1093/nar/gkt561DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3753654PMC
August 2013

Gene transcription is coordinated with, but not dependent on, cell divisions during C. elegans embryonic fate specification.

Development 2013 Aug 17;140(16):3385-94. Epub 2013 Jul 17.

Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104-6321, USA.

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http://dev.biologists.org/cgi/doi/10.1242/dev.098012
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http://dx.doi.org/10.1242/dev.098012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3737719PMC
August 2013

linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis.

Genes Dev 2013 Jun 30;27(11):1260-71. Epub 2013 May 30.

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1101/gad.217018.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3690399PMC
June 2013

Single-chromosome transcriptional profiling reveals chromosomal gene expression regulation.

Nat Methods 2013 Mar 17;10(3):246-8. Epub 2013 Feb 17.

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1038/nmeth.2372DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4131260PMC
March 2013

Spo0A~P imposes a temporal gate for the bimodal expression of competence in Bacillus subtilis.

PLoS Genet 2012 8;8(3):e1002586. Epub 2012 Mar 8.

Public Health Research Institute Center of New Jersey Medical School, Newark, New Jersey, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1002586DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3297582PMC
September 2012

Global analysis of RNA secondary structure in two metazoans.

Cell Rep 2012 Jan 26;1(1):69-82. Epub 2012 Jan 26.

Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1016/j.celrep.2011.10.002DOI Listing
January 2012

Single molecule imaging of RNA in situ.

Methods Mol Biol 2011 ;714:3-13

Public Health Research Institute Center, New Jersey Medical School, University of Medicine and Dentistry of New Jersey, Newark, NJ, USA.

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http://dx.doi.org/10.1007/978-1-61779-005-8_1DOI Listing
July 2011

Genes methylated by DNA methyltransferase 3b are similar in mouse intestine and human colon cancer.

J Clin Invest 2011 May 1;121(5):1748-52. Epub 2011 Apr 1.

Whitehead Institute for Biomedical Research and Department of Biology, Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1172/JCI43169DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3083798PMC
May 2011

Molecular biology. Time-lapse transcription.

Science 2011 Apr;332(6028):431-2

Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1126/science.1205995DOI Listing
April 2011

Imaging single mRNA molecules in yeast.

Methods Enzymol 2010 1;470:429-46. Epub 2010 Mar 1.

Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1016/S0076-6879(10)70017-3DOI Listing
January 2011

Detection of individual endogenous RNA transcripts in situ using multiple singly labeled probes.

Methods Enzymol 2010 ;472:365-86

Department of Bioengineering, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S00766879107200
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http://dx.doi.org/10.1016/S0076-6879(10)72004-8DOI Listing
September 2010

Variability in gene expression underlies incomplete penetrance.

Nature 2010 Feb;463(7283):913-8

Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

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http://dx.doi.org/10.1038/nature08781DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2836165PMC
February 2010

Single-molecule approaches to stochastic gene expression.

Annu Rev Biophys 2009 ;38:255-70

Department of Physics, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

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http://dx.doi.org/10.1146/annurev.biophys.37.032807.125928DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3126657PMC
July 2009

Imaging individual mRNA molecules using multiple singly labeled probes.

Nat Methods 2008 Oct 21;5(10):877-9. Epub 2008 Sep 21.

Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

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http://www.nature.com/articles/nmeth.1253
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http://dx.doi.org/10.1038/nmeth.1253DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3126653PMC
October 2008

Nature, nurture, or chance: stochastic gene expression and its consequences.

Cell 2008 Oct;135(2):216-26

Department of Physics, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

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http://dx.doi.org/10.1016/j.cell.2008.09.050DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3118044PMC
October 2008

Noise in gene expression determines cell fate in Bacillus subtilis.

Science 2007 Jul 14;317(5837):526-9. Epub 2007 Jun 14.

Public Health Research Institute Center, New Jersey Medical School, 225 Warren Street, Newark, NJ 07103, USA.

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http://www.sciencemag.org/cgi/doi/10.1126/science.1140818
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http://dx.doi.org/10.1126/science.1140818DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3828679PMC
July 2007

Stochastic mRNA synthesis in mammalian cells.

PLoS Biol 2006 Oct;4(10):e309

Courant Institute of Mathematical Sciences, New York University, New York, New York, USA.

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http://dx.doi.org/10.1371/journal.pbio.0040309DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1563489PMC
October 2006

The influence of chromosome flexibility on chromosome transport during anaphase A.

Proc Natl Acad Sci U S A 2006 Apr 27;103(14):5349-54. Epub 2006 Mar 27.

Courant Institute of Mathematical Sciences, New York University, 251 Mercer Street, New York, NY 10012, USA.

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http://dx.doi.org/10.1073/pnas.0601215103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1459358PMC
April 2006

Mechanism of mRNA transport in the nucleus.

Proc Natl Acad Sci U S A 2005 Nov 11;102(47):17008-13. Epub 2005 Nov 11.

Department of Molecular Genetics, Public Health Research Institute, 225 Warren Street, Newark, NJ 07103, USA.

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http://dx.doi.org/10.1073/pnas.0505580102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1287982PMC
November 2005