Publications by authors named "Arijit Mukhopadhyay"

54Publications

Human Brain Shows Recurrent Non-Canonical MicroRNA Editing Events Enriched for Seed Sequence with Possible Functional Consequence.

Authors:
Deepanjan Paul Asgar Hussain Ansari Megha Lal Arijit Mukhopadhyay

Noncoding RNA 2020 Jun 2;6(2). Epub 2020 Jun 2.

Academy of Scientific and Innovative Research, Ghaziabad, Uttar Pradesh 201002, India.

View Article and Find Full Text PDF
June 2020

Genetic landscape of autism spectrum disorder in Vietnamese children.

Authors:
Kien Trung Tran Vinh Sy Le Hoa Thi Phuong Bui Duong Huy Do Ha Thi Thanh Ly Hieu Thi Nguyen Lan Thi Mai Dao Thanh Hong Nguyen Duc Minh Vu Lien Thi Ha Huong Thi Thanh Le Arijit Mukhopadhyay Liem Thanh Nguyen

Sci Rep 2020 03 19;10(1):5034. Epub 2020 Mar 19.

Vinmec Research Institute of Stem Cell and Gene Technology, 458 Minh Khai, Hai Ba Trung district, Hanoi, Vietnam.

View Article and Find Full Text PDF
March 2020

Fusion transcripts in normal human cortex increase with age and show distinct genomic features for single cells and tissues.

Authors:
Bharati Mehani Kiran Narta Deepanjan Paul Anurag Raj Deepak Kumar Anchal Sharma Lalit Kaurani Subhashree Nayak Debasis Dash Ashish Suri Chitra Sarkar Arijit Mukhopadhyay

Sci Rep 2020 Jan 28;10(1):1368. Epub 2020 Jan 28.

Academy of Scientific and Innovative Research (AcSIR), Delhi, India.

View Article and Find Full Text PDF
January 2020

Identification of miR-379/miR-656 (C14MC) cluster downregulation and associated epigenetic and transcription regulatory mechanism in oligodendrogliomas.

Authors:
Anupam Kumar Subhashree Nayak Pankaj Pathak Suvendu Purkait Prit Benny Malgulawar Mehar Chand Sharma Vaishali Suri Arijit Mukhopadhyay Ashish Suri Chitra Sarkar

J Neurooncol 2018 Aug 21;139(1):23-31. Epub 2018 Jun 21.

Department of Pathology, All India Institute of Medical Sciences, Ansari Nagar, New Delhi, 110029, India.

View Article and Find Full Text PDF
August 2018

Novel internal regulators and candidate miRNAs within miR-379/miR-656 miRNA cluster can alter cellular phenotype of human glioblastoma.

Authors:
Subhashree Nayak Meghali Aich Anupam Kumar Suman Sengupta Prajakta Bajad Parashar Dhapola Deepanjan Paul Kiran Narta Suvendu Purkrait Bharati Mehani Ashish Suri Debojyoti Chakraborty Arijit Mukhopadhyay Chitra Sarkar

Sci Rep 2018 05 16;8(1):7673. Epub 2018 May 16.

Department of Pathology, All India Institute of Medical Sciences, New Delhi, 110029, India.

View Article and Find Full Text PDF
May 2018

A-to-I editing in human miRNAs is enriched in seed sequence, influenced by sequence contexts and significantly hypoedited in glioblastoma multiforme.

Authors:
Deepanjan Paul Ashis Narayan Sinha Arjun Ray Megha Lal Subhashree Nayak Anchal Sharma Bharati Mehani Debasish Mukherjee Saurabh V Laddha Ashish Suri Chitra Sarkar Arijit Mukhopadhyay

Sci Rep 2017 05 26;7(1):2466. Epub 2017 May 26.

Genomics & Molecular Medicine Unit, CSIR-Institute of Genomics & Integrative Biology, Delhi, India.

View Article and Find Full Text PDF
May 2017

Human brain harbors single nucleotide somatic variations in functionally relevant genes possibly mediated by oxidative stress.

Authors:
Anchal Sharma Asgar Hussain Ansari Renu Kumari Rajesh Pandey Rakhshinda Rehman Bharati Mehani Binuja Varma Bapu K Desiraju Ulaganathan Mabalirajan Anurag Agrawal Arijit Mukhopadhyay

F1000Res 2016 14;5:2520. Epub 2016 Oct 14.

Genomics & Molceular Medicine Unit, CSIR-Institute of Genomics & Integrative Biology, Delhi, 110020, India; Academy of Scientific and Innovative Research, CSIR-Institute of Genomics & Integrative Biology (AcSIR-IGIB), Delhi, 110020, India; School of Environment and Life Sciences, University of Salford, Manchester, UK.

View Article and Find Full Text PDF
October 2016

TBK1 duplication is found in normal tension and not in high tension glaucoma patients of Indian origin.

Authors:
Lalit Kaurani Mansi Vishal Jharna Ray Abhijit Sen Kunal Ray Arijit Mukhopadhyay

J Genet 2016 Jun;95(2):459-61

Genomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, New Delhi 110 020,

View Article and Find Full Text PDF
June 2016

Genetic association and stress mediated down-regulation in trabecular meshwork implicates MPP7 as a novel candidate gene in primary open angle glaucoma.

Authors:
Mansi Vishal Anchal Sharma Lalit Kaurani Giovanna Alfano Suddhasil Mookherjee Kiran Narta Jyoti Agrawal Iman Bhattacharya Susanta Roychoudhury Jharna Ray Naushin H Waseem Shomi S Bhattacharya Analabha Basu Abhijit Sen Kunal Ray Arijit Mukhopadhyay

BMC Med Genomics 2016 Mar 22;9:15. Epub 2016 Mar 22.

Genomics & Molecular Medicine, CSIR-Institute of Genomics & Integrative Biology, Mathura Road (near Sukhdev Vihar), New Delhi, 110025, India.

View Article and Find Full Text PDF
March 2016

Altered expression and editing of miRNA-100 regulates iTreg differentiation.

Authors:
Vinny Negi Deepanjan Paul Sudipta Das Prashant Bajpai Suchita Singh Arijit Mukhopadhyay Anurag Agrawal Balaram Ghosh

Nucleic Acids Res 2015 Sep 23;43(16):8057-65. Epub 2015 Jul 23.

Molecular Immunogenetics Laboratory and Centre of Excellence for Translational Research in Asthma & Lung disease, CSIR-Institute of Genomics and Integrative Biology, Delhi 110007, India Academy of Scientific & Innovative Research, CSIR-Institute of Genomics and Integrative Biology, Delhi 110007, India

View Article and Find Full Text PDF
September 2015

Genomic copy number variations in glaucomatous neurodegeneration.

Authors:
Arijit Mukhopadhyay

Mol Cytogenet 2014 21;7(Suppl 1 Proceedings of the International Conference on Human):I33. Epub 2014 Jan 21.

CSIR-Institute of Genomic and Integrative Biology, New Delhi, India.

View Article and Find Full Text PDF
June 2014

Evaluation of genetic association of the INK4 locus with primary open angle glaucoma in East Indian population.

Authors:
Mansi Vishal Anchal Sharma Lalit Kaurani Subhadip Chakraborty Jharna Ray Abhijit Sen Arijit Mukhopadhyay Kunal Ray

Sci Rep 2014 May 30;4:5115. Epub 2014 May 30.

1] Molecular and Human Genetics Division, CSIR-Indian Institute of Chemical Biology, Kolkata, India [2] Academy of Scientific and Innovative Research (AcSIR), New Delhi, India.

View Article and Find Full Text PDF
May 2014

Gene-rich large deletions are overrepresented in POAG patients of Indian and Caucasian origins.

Authors:
Lalit Kaurani Mansi Vishal Dhirendra Kumar Anchal Sharma Bharati Mehani Charu Sharma Subhadip Chakraborty Pankaj Jha Jharna Ray Abhijit Sen Debasis Dash Kunal Ray Arijit Mukhopadhyay

Invest Ophthalmol Vis Sci 2014 Apr 24;55(5):3258-64. Epub 2014 Apr 24.

Genomics and Molecular Medicine, CSIR-Institute of Genomics and Integrative Biology, Delhi, India Academy of Scientific and Innovative Research (AcSIR), New Delhi, India.

View Article and Find Full Text PDF
April 2014

Mitochondrial genome analysis of primary open angle glaucoma patients.

Authors:
Deblina Banerjee Antara Banerjee Suddhasil Mookherjee Mansi Vishal Arijit Mukhopadhyay Abhijit Sen Analabha Basu Kunal Ray

PLoS One 2013 5;8(8):e70760. Epub 2013 Aug 5.

Molecular & Human Genetics Division, CSIR-Indian Institute of Chemical Biology, Kolkata, India.

View Article and Find Full Text PDF
March 2014

Exosome-enclosed microRNAs in exhaled breath hold potential for biomarker discovery in patients with pulmonary diseases.

Authors:
Anirban Sinha Amit Kumar Yadav Samarpana Chakraborty S K Kabra R Lodha Manish Kumar Ankur Kulshreshtha Tavpritesh Sethi Rajesh Pandey Gaurav Malik Saurabh Laddha Arijit Mukhopadhyay Debasis Dash Balaram Ghosh Anurag Agrawal

J Allergy Clin Immunol 2013 Jul 14;132(1):219-22. Epub 2013 May 14.

View Article and Find Full Text PDF
July 2013

Genome-wide analysis reveals downregulation of miR-379/miR-656 cluster in human cancers.

Authors:
Saurabh V Laddha Subhashree Nayak Deepanjan Paul Rajasekhara Reddy Charu Sharma Prerana Jha Manoj Hariharan Anurag Agrawal Shantanu Chowdhury Chitra Sarkar Arijit Mukhopadhyay

Biol Direct 2013 Apr 24;8:10. Epub 2013 Apr 24.

CSIR-Institute of Genomics & Integrative Biology, G,N, Ramachandran Knowledge Centre for Genome Informatics, Delhi, India.

View Article and Find Full Text PDF
April 2013

Genetic association and gene-gene interaction of HAS2, HABP1 and HYAL3 implicate hyaluronan metabolic genes in glaucomatous neurodegeneration.

Authors:
Kaustuv Basu Abhijit Sen Kunal Ray Ilora Ghosh Kasturi Datta Arijit Mukhopadhyay

Dis Markers 2012 ;33(3):145-54

Biochemistry Laboratory, School of Environmental Sciences, Jawaharlal Nehru University, New Delhi, India.

View Article and Find Full Text PDF
January 2013

Nuclear morphology and c-Jun N-terminal kinase 1 expression differentiate serum-starved oxidative stress signalling from hydrogen peroxide-induced apoptosis in retinal neuronal cell line.

Authors:
Kaustuv Basu Arijit Mukhopadhyay Ilora Ghosh Kasturi Datta

Cell Biol Int 2012 Nov;36(11):1021-7

Biochemistry Laboratory, School of Environmental Sciences, Jawaharlal Nehru University, New Delhi, India.

View Article and Find Full Text PDF
November 2012

Evaluation of the role of LRRK2 gene in Parkinson's disease in an East Indian cohort.

Authors:
Tamal Sadhukhan Mansi Vishal Gautami Das Aanchal Sharma Arijit Mukhopadhyay Shyamal K Das Kunal Ray Jharna Ray

Dis Markers 2012 ;32(6):355-62

S. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, India.

View Article and Find Full Text PDF
September 2012

Spectrum of large copy number variations in 26 diverse Indian populations: potential involvement in phenotypic diversity.

Authors:
Pramod Gautam Pankaj Jha Dhirendra Kumar Shivani Tyagi Binuja Varma Debasis Dash Arijit Mukhopadhyay Mitali Mukerji

Hum Genet 2012 Jan 9;131(1):131-43. Epub 2011 Jul 9.

Genomics and Molecular Medicine, Institute of Genomics and Integrative Biology, Delhi 110007, India.

View Article and Find Full Text PDF
January 2012