Annie Moradian

Annie Moradian

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Annie Moradian

Annie Moradian

Publications by authors named "Annie Moradian"

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Stable Isotope Analysis of Intact Oxyanions Using Electrospray Quadrupole-Orbitrap Mass Spectrometry.

Anal Chem 2020 Feb 3;92(4):3077-3085. Epub 2020 Feb 3.

Division of Geological and Planetary Sciences , California Institute of Technology , Pasadena , California 91125 , United States.

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http://dx.doi.org/10.1021/acs.analchem.9b04486DOI Listing
February 2020

Nano volume fractionation strategy for dilute-and-shoot injections in off-line loss-less proteomic workflows for extensive protein identifications of ultra-low sample amounts.

J Chromatogr A 2020 Jan 3;1609:460507. Epub 2019 Sep 3.

Proteome Exploration Laboratory, Beckman Institute, California Institute of Technology, Pasadena, CA, USA.

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http://dx.doi.org/10.1016/j.chroma.2019.460507DOI Listing
January 2020

The SNAP25 Interactome in Ventromedial Caudate in Schizophrenia Includes the Mitochondrial Protein ARF1.

Neuroscience 2019 Nov 2;420:97-111. Epub 2019 Jan 2.

BC Mental Health and Addictions Research Institute, 938 West 28th Ave, Vancouver, BC V5Z 4H4, Canada; Department of Psychiatry, University of British Columbia, 2255 Wesbrook Mall, Vancouver, BC V6T 2A1, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.neuroscience.2018.12.045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6606395PMC
November 2019

Data-Independent Acquisition for the Orbitrap Q Exactive HF: A Tutorial.

J Proteome Res 2019 03 17;18(3):803-813. Epub 2019 Jan 17.

Proteome Exploration Laboratory, Beckman Institute , California Institute of Technology , 1200 East California Boulevard , Pasadena , California 91125 , United States.

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http://pubs.acs.org/doi/10.1021/acs.jproteome.8b00845
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http://dx.doi.org/10.1021/acs.jproteome.8b00845DOI Listing
March 2019

BUD13 Promotes a Type I Interferon Response by Countering Intron Retention in Irf7.

Mol Cell 2019 02 10;73(4):803-814.e6. Epub 2019 Jan 10.

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2018.11.038DOI Listing
February 2019

FXR1 Is an IL-19-Responsive RNA-Binding Protein that Destabilizes Pro-inflammatory Transcripts in Vascular Smooth Muscle Cells.

Cell Rep 2018 07;24(5):1176-1189

Department of Physiology, Independence Blue Cross Cardiovascular Research Center, Temple University School of Medicine, Philadelphia, PA 19140, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S22111247183107
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http://dx.doi.org/10.1016/j.celrep.2018.07.002DOI Listing
July 2018

Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria.

Proc Natl Acad Sci U S A 2018 05 4;115(21):E4796-E4805. Epub 2018 May 4.

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125;

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http://dx.doi.org/10.1073/pnas.1722055115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6003448PMC
May 2018

High-Resolution Parallel Reaction Monitoring with Electron Transfer Dissociation for Middle-Down Proteomics: An Application to Study the Quantitative Changes Induced by Histone Modifying Enzyme Inhibitors and Activators.

Methods Mol Biol 2017 ;1647:61-69

Proteome Exploration Laboratory, California Institute of Technology, MC139-74, 1200 E California Blvd., Pasadena, CA, 91125, USA.

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http://dx.doi.org/10.1007/978-1-4939-7201-2_4DOI Listing
April 2018

Interrogating marine virus-host interactions and elemental transfer with BONCAT and nanoSIMS-based methods.

Environ Microbiol 2018 02 14;20(2):671-692. Epub 2017 Dec 14.

Division of Geological and Planetary Sciences, California Institute of Technology, CA, USA.

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http://dx.doi.org/10.1111/1462-2920.13996DOI Listing
February 2018

Composition and Regulation of the Cellular Repertoire of SCF Ubiquitin Ligases.

Cell 2017 Nov 2;171(6):1326-1339.e14. Epub 2017 Nov 2.

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA; Howard Hughes Medical Institute, California Institute of Technology, Pasadena, CA 91125, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2017.10.016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5711595PMC
November 2017

Hsp83 loss suppresses proteasomal activity resulting in an upregulation of caspase-dependent compensatory autophagy.

Autophagy 2017 Sep 14;13(9):1573-1589. Epub 2017 Aug 14.

a Canada's Michael Smith Genome Sciences Centre , BC Cancer Agency , Vancouver , BC , Canada.

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http://dx.doi.org/10.1080/15548627.2017.1339004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5612217PMC
September 2017

Bioorthogonal Noncanonical Amino Acid Tagging (BONCAT) Enables Time-Resolved Analysis of Protein Synthesis in Native Plant Tissue.

Plant Physiol 2017 03 19;173(3):1543-1553. Epub 2017 Jan 19.

Division of Chemistry and Chemical Engineering (W.S.G., S.E.S., S.H.H., D.A.T.), and Proteome Exploration Laboratory (M.J.S., A.M., S.H.), California Institute of Technology, Pasadena, California 91125; and

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http://dx.doi.org/10.1104/pp.16.01762DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5338676PMC
March 2017

Quantitative mass spectrometry reveals changes in SNAP-25 isoforms in schizophrenia.

Schizophr Res 2016 11 9;177(1-3):44-51. Epub 2016 Mar 9.

BC Mental Health and Addictions Research Institute, Vancouver, BC, Canada; Department of Psychiatry, University of British Columbia, Vancouver, BC, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.schres.2016.03.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5017887PMC
November 2016

A Targeted MRM Approach for Tempo-Spatial Proteomics Analyses.

Methods Mol Biol 2016 ;1394:75-85

Proteome Exploration Laboratory, California Institute of Technology, BI 211, MC139-74, Pasadena, CA, 91125, USA.

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http://dx.doi.org/10.1007/978-1-4939-3341-9_6DOI Listing
October 2016

Identification of Mechanism-Based Inactivation in P450-Catalyzed Cyclopropanation Facilitates Engineering of Improved Enzymes.

J Am Chem Soc 2016 09 14;138(38):12527-33. Epub 2016 Sep 14.

Division of Chemistry and Chemical Engineering, MC 210-41, and ‡Proteome Exploration Laboratory, Division of Biology and Biological Engineering, Beckman Institute, MC 139-74, California Institute of Technology , 1200 E California Blvd, Pasadena, California 91125, United States.

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http://dx.doi.org/10.1021/jacs.6b06823DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5042878PMC
September 2016

SutA is a bacterial transcription factor expressed during slow growth in Pseudomonas aeruginosa.

Proc Natl Acad Sci U S A 2016 Feb 19;113(5):E597-605. Epub 2016 Jan 19.

Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125;

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http://dx.doi.org/10.1073/pnas.1514412113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4747698PMC
February 2016

A Trichomonas vaginalis Rhomboid Protease and Its Substrate Modulate Parasite Attachment and Cytolysis of Host Cells.

PLoS Pathog 2015 Dec 18;11(12):e1005294. Epub 2015 Dec 18.

Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, Los Angeles, California, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1005294DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4684317PMC
December 2015

Vectored antibody gene delivery mediates long-term contraception.

Curr Biol 2015 Oct;25(19):R820-2

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2015.08.002DOI Listing
October 2015

High resolution parallel reaction monitoring with electron transfer dissociation for middle-down proteomics.

Anal Chem 2015 Aug 28;87(16):8360-6. Epub 2015 Jul 28.

†Proteome Exploration Laboratory, Division of Biology and Biological Engineering, Beckman Institute, California Institute of Technology, Pasadena, California 91125, United States.

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http://dx.doi.org/10.1021/acs.analchem.5b01542DOI Listing
August 2015

Oxidation of p53 through DNA charge transport involves a network of disulfides within the DNA-binding domain.

Biochemistry 2015 Jan 13;54(3):932-41. Epub 2015 Jan 13.

Division of Chemistry and Chemical Engineering, California Institute of Technology , Pasadena, California 91125, United States.

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http://dx.doi.org/10.1021/bi501424vDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4310631PMC
January 2015

Mutations in CIC and IDH1 cooperatively regulate 2-hydroxyglutarate levels and cell clonogenicity.

Oncotarget 2014 Sep;5(17):7960-79

Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada. Department of Medical Genetics, University of British Columbia, Vancouver, BC, Canada.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4202173PMC
http://dx.doi.org/10.18632/oncotarget.2401DOI Listing
September 2014

The Drosophila effector caspase Dcp-1 regulates mitochondrial dynamics and autophagic flux via SesB.

J Cell Biol 2014 May;205(4):477-92

The Genome Sciences Centre, British Columbia Cancer Agency, Vancouver, British Columbia V5Z 1L3, Canada Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada

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http://dx.doi.org/10.1083/jcb.201303144DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4033768PMC
May 2014

The top-down, middle-down, and bottom-up mass spectrometry approaches for characterization of histone variants and their post-translational modifications.

Proteomics 2014 Mar 16;14(4-5):489-97. Epub 2013 Dec 16.

Proteome Exploration Laboratory, Beckman Institute, California Institute of Technology, Pasadena, CA, USA.

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http://dx.doi.org/10.1002/pmic.201300256DOI Listing
March 2014

The mammalian proteins MMS19, MIP18, and ANT2 are involved in cytoplasmic iron-sulfur cluster protein assembly.

J Biol Chem 2012 Dec 13;287(52):43351-8. Epub 2012 Nov 13.

European Research Institute for the Biology of Ageing, University Medical Center Groningen, University of Groningen, Antonius Deusinglaan 1, 9713 AV Groningen, The Netherlands.

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http://dx.doi.org/10.1074/jbc.M112.431270DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3527922PMC
December 2012

Cytosolic protein interactions of the schizophrenia susceptibility gene dysbindin.

J Neurochem 2010 Jun 14;113(6):1491-503. Epub 2010 Mar 14.

Michael Smith Genome Sciences Centre, British Columbia Cancer Research Centre, Vancouver, British Columbia, Canada.

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http://dx.doi.org/10.1111/j.1471-4159.2010.06690.xDOI Listing
June 2010

Mass selective axial ion ejection from linear quadrupoles with added octopole fields.

J Am Soc Mass Spectrom 2008 Feb 12;19(2):270-80. Epub 2007 Nov 12.

Department of Chemistry, University of British Columbia, Vancouver, British Columbia, Canada.

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http://dx.doi.org/10.1016/j.jasms.2007.10.025DOI Listing
February 2008

Experimental investigation of mass analysis using an island of stability with a quadrupole with 2.0% added octopole field.

Rapid Commun Mass Spectrom 2007 ;21(20):3306-10

Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada.

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http://dx.doi.org/10.1002/rcm.3224DOI Listing
November 2007