Publications by authors named "Annette McGrath"

15Publications

Global transcriptomic profiling in barramundi (Lates calcarifer) from rivers impacted by differing agricultural land uses.

Environ Toxicol Chem 2017 01 2;36(1):103-112. Epub 2016 Sep 2.

Commonwealth Scientific and Industrial Research Organisation (CSIRO), Atherton, Queensland, Australia.

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http://dx.doi.org/10.1002/etc.3505DOI Listing
January 2017

Towards an open, collaborative, reusable framework for sharing hands-on bioinformatics training workshops.

Brief Bioinform 2017 03;18(2):348-355

The Genome Analysis Centre, Norwich, ELIXIR, Wellcome Trust Genome Campus, Hinxton, UK, The Swedish University for Agricultural Sciences, Uppsala, Sweden, European Molecular Biology Laboratory, Heidelberg, Germany, Ontario Institute for Cancer Research, Toronto, Canada, Instituto Gulbenkian de Ciência, Oeiras, Portugal, The University of New South Wales, Sydney, Australia, Netherlands Bioinformatics Centre, Department of Bioinformatics, Radboud Medical Center, Nijmegen, The Netherlands, CSC - IT Center for Science Ltd., Espoo, Finland, Whitehead Institute for Biomedical Research, MIT, Cambridge, MA, USA, CSIRO, Bioinformatics Core, Canberra, Australia, The Sainsbury Laboratory, Norwich Research Park, Norwich, UK, SIB Swiss Institute of Bioinformatics, 1 Rue Michel Servet, Genève, Switzerland, Academis, Illstrasse 12, Berlin, Germany, The Nowgen Centre, 29 Grafton Street, Manchester, UK, Department of Physics, Sapienza University, Rome, Italy, The Roslin Institute, Edinburgh, UK and The University of Manchester, Manchester, UK.

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http://dx.doi.org/10.1093/bib/bbw013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5444239PMC
March 2017

The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers.

Bioinformatics 2015 Jan 4;31(1):140-2. Epub 2014 Sep 4.

The Genome Analysis Centre, Norwich, ELIXIR, Wellcome Trust Genome Campus, Hinxton, UK, The Swedish University for Agricultural Sciences, Uppsala, Sweden, European Molecular Biology Laboratory, Heidelberg, Germany, Ontario Institute for Cancer Research, Toronto, Canada, Instituto Gulbenkian de Ciência, Oeiras, Portugal, The University of New South Wales, Sydney, Australia, Netherlands Bioinformatics Centre, Department of Bioinformatics, Radboud Medical Center, Nijmegen, The Netherlands, CSC - IT Center for Science Ltd., Espoo, Finland, Whitehead Institute for Biomedical Research, MIT, Cambridge, MA, USA, CSIRO, Bioinformatics Core, Canberra, Australia, The Sainsbury Laboratory, Norwich Research Park, Norwich, UK, SIB Swiss Institute of Bioinformatics, 1 Rue Michel Servet, Genève, Switzerland, Academis, Illstrasse 12, 12161 Berlin, Germany, The Nowgen Centre, 29 Grafton Street, Manchester, UK, Department of Physics, Sapienza University, Rome, Italy, The Roslin Institute, Edinburgh, UK and The University of Manchester, Manchester, UK.

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http://dx.doi.org/10.1093/bioinformatics/btu601DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4271145PMC
January 2015

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development.

Authors:
Marilyn B Renfree Anthony T Papenfuss Janine E Deakin James Lindsay Thomas Heider Katherine Belov Willem Rens Paul D Waters Elizabeth A Pharo Geoff Shaw Emily S W Wong Christophe M Lefèvre Kevin R Nicholas Yoko Kuroki Matthew J Wakefield Kyall R Zenger Chenwei Wang Malcolm Ferguson-Smith Frank W Nicholas Danielle Hickford Hongshi Yu Kirsty R Short Hannah V Siddle Stephen R Frankenberg Keng Yih Chew Brandon R Menzies Jessica M Stringer Shunsuke Suzuki Timothy A Hore Margaret L Delbridge Hardip R Patel Amir Mohammadi Nanette Y Schneider Yanqiu Hu William O'Hara Shafagh Al Nadaf Chen Wu Zhi-Ping Feng Benjamin G Cocks Jianghui Wang Paul Flicek Stephen M J Searle Susan Fairley Kathryn Beal Javier Herrero Dawn M Carone Yutaka Suzuki Sumio Sugano Atsushi Toyoda Yoshiyuki Sakaki Shinji Kondo Yuichiro Nishida Shoji Tatsumoto Ion Mandiou Arthur Hsu Kaighin A McColl Benjamin Lansdell George Weinstock Elizabeth Kuczek Annette McGrath Peter Wilson Artem Men Mehlika Hazar-Rethinam Allison Hall John Davis David Wood Sarah Williams Yogi Sundaravadanam Donna M Muzny Shalini N Jhangiani Lora R Lewis Margaret B Morgan Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Lynne Nazareth Andrew Cree Gerald Fowler Christie L Kovar Huyen H Dinh Vandita Joshi Chyn Jing Fremiet Lara Rebecca Thornton Lei Chen Jixin Deng Yue Liu Joshua Y Shen Xing-Zhi Song Janette Edson Carmen Troon Daniel Thomas Amber Stephens Lankesha Yapa Tanya Levchenko Richard A Gibbs Desmond W Cooper Terence P Speed Asao Fujiyama Jennifer A M Graves Rachel J O'Neill Andrew J Pask Susan M Forrest Kim C Worley

Genome Biol 2011 Aug 29;12(8):R81. Epub 2011 Aug 29.

The Australian Research Council Centre of Excellence in Kangaroo Genomics, Australia.

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http://dx.doi.org/10.1186/gb-2011-12-8-r81DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3277949PMC
August 2011

Identification, analysis, and linkage mapping of expressed sequence tags from the Australian sheep blowfly.

BMC Genomics 2011 Aug 10;12:406. Epub 2011 Aug 10.

Centre for Environmental Stress and Adaptation Research, Bio21 Institute, Genetics Department, University of Melbourne, 30 Flemington Road, Parkville, VIC 3010, Australia.

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http://dx.doi.org/10.1186/1471-2164-12-406DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3176259PMC
August 2011

Sequence and organization of the Heliothis virescens ascovirus genome.

J Gen Virol 2007 Apr;88(Pt 4):1120-32

School of Integrative Biology, University of Queensland, St Lucia, QLD 4072, Australia.

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http://dx.doi.org/10.1099/vir.0.82651-0DOI Listing
April 2007

Genome reduction in Leptospira borgpetersenii reflects limited transmission potential.

Proc Natl Acad Sci U S A 2006 Sep 14;103(39):14560-5. Epub 2006 Sep 14.

Australian Bacterial Pathogenesis Program, Victorian Bioinformatics Consortium, Department of Microbiology, Monash University, Victoria 3800, Australia.

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http://dx.doi.org/10.1073/pnas.0603979103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1599999PMC
September 2006