Publications by authors named "Anna Di Rienzo"

77Publications

Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal.

PLoS Genet 2018 09 6;14(9):e1007650. Epub 2018 Sep 6.

Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1007650DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6143271PMC
September 2018

Ethnically Tibetan women in Nepal with low hemoglobin concentration have better reproductive outcomes.

Evol Med Public Health 2017 21;2017(1):82-96. Epub 2017 Apr 21.

Department of Anthropology, Case Western Reserve University, Cleveland, OH 44106, USA.

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http://dx.doi.org/10.1093/emph/eox008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5442430PMC
April 2017

Colonic transcriptional response to 1α,25(OH) vitamin D in African- and European-Americans.

J Steroid Biochem Mol Biol 2017 04 3;168:49-59. Epub 2017 Feb 3.

University of Chicago, Department of Medicine, Section of Gastroenterology, Chicago, IL, United States. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S09600760173003
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http://dx.doi.org/10.1016/j.jsbmb.2017.02.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5642973PMC
April 2017

Editorial overview: Genetics of human origin: New horizons in human population genetics.

Curr Opin Genet Dev 2016 12 23;41:v-vi. Epub 2016 Nov 23.

Department of Human Genetics, University of Chicago, Chicago, IL, USA. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2016.11.002DOI Listing
December 2016

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.

Nature 2016 Oct 21;538(7624):201-206. Epub 2016 Sep 21.

Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.

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http://dx.doi.org/10.1038/nature18964DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5161557PMC
October 2016

Long-term genetic stability and a high-altitude East Asian origin for the peoples of the high valleys of the Himalayan arc.

Proc Natl Acad Sci U S A 2016 07 20;113(27):7485-90. Epub 2016 Jun 20.

Department of Anthropology, University of Oklahoma, Norman, OK 73019; Institute of Evolutionary Medicine, University of Zurich, Zurich CH-8057, Switzerland

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http://dx.doi.org/10.1073/pnas.1520844113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4941446PMC
July 2016

Deep History of East Asian Populations Revealed Through Genetic Analysis of the Ainu.

Genetics 2016 Jan 23;202(1):261-72. Epub 2015 Oct 23.

Department of Human Genetics, University of Chicago, Chicago, Illinois 60615

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http://dx.doi.org/10.1534/genetics.115.178673DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4701090PMC
January 2016

Combining genetic and nongenetic biomarkers to realize the promise of pharmacogenomics for inflammatory diseases.

Pharmacogenomics 2014 ;15(15):1931-40

Committee on Clinical Pharmacology & Pharmacogenomics, The University of Chicago, Chicago, IL, USA.

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http://dx.doi.org/10.2217/pgs.14.129DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4291228PMC
August 2015

Adaptations to local environments in modern human populations.

Curr Opin Genet Dev 2014 Dec 15;29:1-8. Epub 2014 Aug 15.

Department of Human Genetics, University of Chicago, Chicago, IL, 60637, United States. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2014.06.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4258478PMC
December 2014

In vitro sensitivity assays and clinical response to glucocorticoids in patients with inflammatory bowel disease.

J Crohns Colitis 2014 Nov 19;8(11):1539-47. Epub 2014 Jul 19.

Department of Medicine, The University of Chicago, Chicago, IL, USA. Electronic address:

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http://dx.doi.org/10.1016/j.crohns.2014.06.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4648270PMC
November 2014

Gene expression of peripheral blood cells reveals pathways downstream of glucocorticoid receptor antagonism and nab-paclitaxel treatment.

Pharmacogenet Genomics 2014 Sep;24(9):451-8

aCommittee on Clinical Pharmacology and Pharmacogenetics Departments of bMedicine cHuman Genetics, The University of Chicago, Chicago, Illinois, USA.

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http://dx.doi.org/10.1097/FPC.0000000000000077DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4122588PMC
September 2014

Thermosensitive block copolymer hydrogels based on poly(ɛ-caprolactone) and polyethylene glycol for biomedical applications: state of the art and future perspectives.

J Biomed Mater Res A 2015 Mar 25;103(3):1276-90. Epub 2014 Jun 25.

Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Corso Duca degli Abruzzi 24, Turin, Italy.

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http://doi.wiley.com/10.1002/jbm.a.35253
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http://dx.doi.org/10.1002/jbm.a.35253DOI Listing
March 2015

Biomimetic myocardial patches fabricated with poly(ɛ-caprolactone) and polyethylene glycol-based polyurethanes.

J Biomed Mater Res B Appl Biomater 2014 Jul 5;102(5):1002-13. Epub 2013 Dec 5.

Department of Mechanical and Aerospace Engineering, Politecnico di Torino, Torino, Italy.

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http://doi.wiley.com/10.1002/jbm.b.33081
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http://dx.doi.org/10.1002/jbm.b.33081DOI Listing
July 2014

Genetic mapping with multiple levels of phenotypic information reveals determinants of lymphocyte glucocorticoid sensitivity.

Am J Hum Genet 2013 Oct 19;93(4):735-43. Epub 2013 Sep 19.

Committee on Clinical Pharmacology and Pharmacogenomics, The University of Chicago, 900 East 57(th) Street, Chicago, IL 60637, USA; Department of Human Genetics, The University of Chicago, 920 East 58(th) Street, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1016/j.ajhg.2013.08.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3791266PMC
October 2013

Allelic imbalance assays to quantify allele-specific gene expression and transcription factor binding.

Methods Mol Biol 2013 ;1015:201-11

Department of Human Genetics, University of Chicago, Chicago, IL, USA.

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http://dx.doi.org/10.1007/978-1-62703-435-7_13DOI Listing
February 2014

Genetic, functional and molecular features of glucocorticoid receptor binding.

PLoS One 2013 30;8(4):e61654. Epub 2013 Apr 30.

Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0061654PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3640037PMC
November 2013

Incomplete lineage sorting is common in extant gibbon genera.

PLoS One 2013 14;8(1):e53682. Epub 2013 Jan 14.

Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0053682PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3544895PMC
July 2013

The genetic architecture of adaptations to high altitude in Ethiopia.

PLoS Genet 2012 6;8(12):e1003110. Epub 2012 Dec 6.

Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1003110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3516565PMC
May 2013

Mapping gene-environment interactions at regulatory polymorphisms: insights into mechanisms of phenotypic variation.

Transcription 2012 Mar-Apr;3(2):56-62. Epub 2012 Mar 1.

Department of Human Genetics, The University of Chicago, Chicago, IL, USA.

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http://dx.doi.org/10.4161/trns.19497DOI Listing
June 2012

A reduced representation approach to population genetic analyses and applications to human evolution.

Genome Res 2011 Jul 31;21(7):1087-98. Epub 2011 May 31.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA

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http://dx.doi.org/10.1101/gr.119792.110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3129251PMC
July 2011

Allele-specific down-regulation of RPTOR expression induced by retinoids contributes to climate adaptations.

PLoS Genet 2010 Oct 28;6(10):e1001178. Epub 2010 Oct 28.

Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1001178DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2965758PMC
October 2010

Adaptation - not by sweeps alone.

Nat Rev Genet 2010 Oct 14;11(10):665-7. Epub 2010 Sep 14.

Department of Human Genetics, Howard Hughes Medical Institute, University of Chicago, Illinois 60615, USA.

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http://dx.doi.org/10.1038/nrg2880DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4652788PMC
October 2010

Population genetic analysis of the uncoupling proteins supports a role for UCP3 in human cold resistance.

Mol Biol Evol 2011 Jan 28;28(1):601-14. Epub 2010 Aug 28.

Department of Human Genetics, University of Chicago, USA.

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http://dx.doi.org/10.1093/molbev/msq228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3002247PMC
January 2011

Adaptations to new environments in humans: the role of subtle allele frequency shifts.

Philos Trans R Soc Lond B Biol Sci 2010 Aug;365(1552):2459-68

Department of Human Genetics, University of Chicago, 920 E. 58th Street, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1098/rstb.2010.0032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935101PMC
August 2010

Using environmental correlations to identify loci underlying local adaptation.

Genetics 2010 Aug 1;185(4):1411-23. Epub 2010 Jun 1.

Department of Evolution and Ecology and Center for Population Biology, University of California, Davis, Calfornia 95616, USA.

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http://dx.doi.org/10.1534/genetics.110.114819DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2927766PMC
August 2010

Allelic imbalance (AI) identifies novel tissue-specific cis-regulatory variation for human UGT2B15.

Hum Mutat 2010 Jan;31(1):99-107

Department of Human Genetics, University of Chicago, Chicago, Illinois 60637, USA.

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http://dx.doi.org/10.1002/humu.21145DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2922057PMC
January 2010

Spatial patterns of variation due to natural selection in humans.

Nat Rev Genet 2009 Nov 13;10(11):745-55. Epub 2009 Oct 13.

Department of Ecology and Evolutionary Biology, Interdepartmental Program in Bioinformatics, University of California-Los Angeles, Los Angeles, California 90095-1606, USA.

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http://dx.doi.org/10.1038/nrg2632DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3989104PMC
November 2009

Adaptive variation regulates the expression of the human SGK1 gene in response to stress.

PLoS Genet 2009 May 22;5(5):e1000489. Epub 2009 May 22.

Department of Human Genetics, The University of Chicago, Chicago, Illinois, USA.

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http://dx.doi.org/10.1371/journal.pgen.1000489DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2679193PMC
May 2009

Characterization of a novel splicing variant in the RAPTOR gene.

Mutat Res 2009 Mar;662(1-2):88-92

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2724650PMC
http://dx.doi.org/10.1016/j.mrfmmm.2009.01.001DOI Listing
March 2009

UGT2B7 is not expressed in normal breast.

Breast Cancer Res Treat 2009 Sep 31;117(1):225-6. Epub 2008 Dec 31.

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http://dx.doi.org/10.1007/s10549-008-0280-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2921443PMC
September 2009

Adaptations to climate in candidate genes for common metabolic disorders.

PLoS Genet 2008 Feb;4(2):e32

Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.0040032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2242814PMC
February 2008

Prevalence of common disease-associated variants in Asian Indians.

BMC Genet 2008 Feb 4;9:13. Epub 2008 Feb 4.

Institute for Genetic Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.

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http://bmcgenet.biomedcentral.com/articles/10.1186/1471-2156
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http://dx.doi.org/10.1186/1471-2156-9-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2267478PMC
February 2008

Detecting the Genetic Signature of Natural Selection in Human Populations: Models, Methods, and Data.

Annu Rev Anthropol 2008 ;37:197-217

Department of Human Genetics, University of Chicago, Chicago, Illinois 60637.

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http://dx.doi.org/10.1146/annurev.anthro.37.081407.085141DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2901121PMC
January 2008

Sequence diversity at the proximal 14q32.1 SERPIN subcluster: evidence for natural selection favoring the pseudogenization of SERPINA2.

Mol Biol Evol 2007 Feb 29;24(2):587-98. Epub 2006 Nov 29.

Institute of Molecular Pathology and Immunology of the University of Porto, Porto, Portugal.

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https://academic.oup.com/mbe/article-lookup/doi/10.1093/molb
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http://dx.doi.org/10.1093/molbev/msl187DOI Listing
February 2007

Population genetics models of common diseases.

Authors:
Anna Di Rienzo

Curr Opin Genet Dev 2006 Dec 19;16(6):630-6. Epub 2006 Oct 19.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S0959437X0600200
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http://dx.doi.org/10.1016/j.gde.2006.10.002DOI Listing
December 2006

Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes.

Proc Natl Acad Sci U S A 2005 Dec 13;102(51):18508-13. Epub 2005 Dec 13.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1073/pnas.0507325102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1311907PMC
December 2005

An evolutionary framework for common diseases: the ancestral-susceptibility model.

Trends Genet 2005 Nov 8;21(11):596-601. Epub 2005 Sep 8.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1016/j.tig.2005.08.007DOI Listing
November 2005

Haplotype structure and phylogenetic shadowing of a hypervariable region in the CAPN10 gene.

Hum Genet 2005 Jul 20;117(2-3):258-66. Epub 2005 May 20.

Department of Human Genetics, University of Chicago, 507F CLSC, 920 E. 58th Street, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1007/s00439-005-1305-0DOI Listing
July 2005

Balancing claims for balancing selection.

Trends Genet 2004 Jul;20(7):300-4

Department of Ecology and Evolution, University of Chicago, 920 E. 58th Street, Chicago, IL 60637, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S016895250400126
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http://dx.doi.org/10.1016/j.tig.2004.05.002DOI Listing
July 2004

Comparative linkage-disequilibrium analysis of the beta-globin hotspot in primates.

Am J Hum Genet 2003 Dec 18;73(6):1330-40. Epub 2003 Nov 18.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1180398PMC
http://dx.doi.org/10.1086/380311DOI Listing
December 2003

Haplotype structure of the UDP-glucuronosyltransferase 1A1 promoter in different ethnic groups.

Pharmacogenetics 2002 Dec;12(9):725-33

Department of Medicine, Committee on Clinical Pharmacology and Pharmacogenomics, Cancer Research Center, The University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1097/00008571-200212000-00006DOI Listing
December 2002

Inferences about human demography based on multilocus analyses of noncoding sequences.

Genetics 2002 Jul;161(3):1209-18

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1462170PMC
July 2002

Linkage disequilibrium and age estimates of a deletion polymorphism (1597DeltaC) in HLA-G suggest non-neutral evolution.

Hum Immunol 2002 May;63(5):405-12

Department of Human Genetics, The University of Chicago, IL, USA.

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http://dx.doi.org/10.1016/s0198-8859(02)00377-4DOI Listing
May 2002

Complex signatures of natural selection at the Duffy blood group locus.

Am J Hum Genet 2002 Feb 20;70(2):369-83. Epub 2001 Dec 20.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1086/338628DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC419988PMC
February 2002