Andrey Y Sivachenko

Andrey Y Sivachenko

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Andrey Y Sivachenko

Andrey Y Sivachenko

Publications by authors named "Andrey Y Sivachenko"

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11Publications

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Integrative and comparative genomic analysis of lung squamous cell carcinomas in East Asian patients.

J Clin Oncol 2014 Jan 9;32(2):121-8. Epub 2013 Dec 9.

Youngwook Kim, Ji-ae Yoon, Yoomi Lee, Yeong Kyung Yoo, and Keunchil Park, Samsung Medical Center, Samsung Biomedical Research Institute; Jong-Mu Sun, Hong Kwan Kim, Yong Soo Choi, Kwhanmien Kim, Young Mog Shim, Yoon-La Choi, Jhingook Kim, Jin Seok Ahn, Myung-Ju Ahn, and Keunchil Park, Samsung Medical Center, Sungkyunkwan University School of Medicine; Sukki Cho, Seoul National University Bundang Hospital, College of Medicine, Seoul National University, Seoul; In-Jae Oh, Kyu-Sik Kim, Sang-Yun Song, Kook-Ju Na, and Young-Chul Kim, Chonnam National University Hwasun Hospital, Jeonnam, Republic of Korea; Peter S. Hammerman, Jaegil Kim, Chandra Sekhar Pedamallu, Kristian Cibulskis, Michael S. Lawrence, Petar Stojanov, Scott L. Carter, Aaron McKenna, Chip Stewart, Andrey Y. Sivachenko, Gad Getz, and Matthew Meyerson, Broad Institute of Harvard and MIT, Cambridge; Matthew Meyerson, Harvard Medical School; Peter S. Hammerman and Chandra Sekhar Pedamallu, Dana-Farber Cancer Institute; Gad Getz, Massachusetts General Hospital Cancer Center, Boston, MA; and Matthew D. Wilkerson and D. Neil Hayes, Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC.

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http://dx.doi.org/10.1200/JCO.2013.50.8556DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4062710PMC
January 2014

ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining.

BMC Bioinformatics 2008 Aug 12;9 Suppl 9:S5. Epub 2008 Aug 12.

School of Informatics, Indiana University - Purdue University, Indianapolis, IN 46202, USA.

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http://dx.doi.org/10.1186/1471-2105-9-S9-S5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2537576PMC
August 2008

Molecular networks in microarray analysis.

J Bioinform Comput Biol 2007 Apr;5(2B):429-56

Ariadne Genomics, Inc., 9430 Key West avenue, Suite 113, Rockville, MD 20850, USA.

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http://dx.doi.org/10.1142/s0219720007002795DOI Listing
April 2007

Pathway analysis software as a tool for drug target selection, prioritization and validation of drug mechanism.

Expert Opin Ther Targets 2007 Mar;11(3):411-21

Ariadne Genomics, Inc., 9430 Key West Avenue, Rockville, MD 20850, USA.

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http://www.tandfonline.com/doi/full/10.1517/14728222.11.3.41
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http://dx.doi.org/10.1517/14728222.11.3.411DOI Listing
March 2007

Mining Alzheimer disease relevant proteins from integrated protein interactome data.

Pac Symp Biocomput 2006 :367-78

Indiana University School of Informatics, Purdue University School of Science, Dept. of Computer and Information Science Indianapolis, IN 46202, USA.

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January 2007

Initial large-scale exploration of protein-protein interactions in human brain.

Proc IEEE Comput Soc Bioinform Conf 2003 ;2:229-34

Myriad Proteomics, Inc., Salt Lake City, UT 84116, USA.

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August 2006

Data mining in protein interactomics. Six computational research challenges and opportunities.

IEEE Eng Med Biol Mag 2005 May-Jun;24(3):95-102

Indiana University School of Informatics, USA.

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http://dx.doi.org/10.1109/memb.2005.1436466DOI Listing
August 2005