Publications by authors named "Andrew Lonie"

20Publications

Hi-Plex2: a simple and robust approach to targeted sequencing-based genetic screening.

Biotechniques 2019 09 3;67(3):118-122. Epub 2019 Jul 3.

Genetic Epidemiology Laboratory, Department of Clinical Pathology, The University of Melbourne, Melbourne, VIC, Australia.

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http://dx.doi.org/10.2144/btn-2019-0026DOI Listing
September 2019

Investigating reproducibility and tracking provenance - A genomic workflow case study.

BMC Bioinformatics 2017 Jul 12;18(1):337. Epub 2017 Jul 12.

Department of Computing and Information Systems, The University of Melbourne, Melbourne, VIC, 3010, Australia.

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http://dx.doi.org/10.1186/s12859-017-1747-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5508699PMC
July 2017

Pipeline for the identification and classification of ion channels in parasitic flatworms.

Parasit Vectors 2016 Mar 16;9:155. Epub 2016 Mar 16.

Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, Victoria, 3010, Australia.

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http://dx.doi.org/10.1186/s13071-016-1428-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4794918PMC
March 2016

iSRAP - a one-touch research tool for rapid profiling of small RNA-seq data.

J Extracell Vesicles 2015 9;4:29454. Epub 2015 Nov 9.

Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, VIC, Australia.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4641893PMC
http://dx.doi.org/10.3402/jev.v4.29454DOI Listing
November 2015

Cpipe: a shared variant detection pipeline designed for diagnostic settings.

Genome Med 2015 10;7(1):68. Epub 2015 Jul 10.

Murdoch Childrens Research Institute, Royal Children's Hospital, Flemington Road, Parkville, 3052 Australia ; Department of Medical Biology, The University of Melbourne, Melbourne, VIC 3010 Australia ; Melbourne Genomics Health Alliance, Melbourne, Australia ; Walter and Eliza Hall Institute, Parkville, VIC 3052 Australia.

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http://dx.doi.org/10.1186/s13073-015-0191-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4515933PMC
July 2015

Whole-genome characterization of chemoresistant ovarian cancer.

Nature 2015 May;521(7553):489-94

1] Peter MacCallum Cancer Centre, East Melbourne, Victoria 3002, Australia [2] Department of Pathology, University of Melbourne, Parkville, Victoria 3052, Australia [3] Sir Peter MacCallum Cancer Centre Department of Oncology, University of Melbourne, Parkville, Victoria 3052, Australia [4] Ovarian Cancer Action Research Centre, Department of Surgery and Cancer, Imperial College London, London W12 0HS, UK [5] Department of Biochemistry and Molecular Biology, University of Melbourne, Parkville, Victoria 3052, Australia.

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http://dx.doi.org/10.1038/nature14410DOI Listing
May 2015

Epigenome-wide methylation in DNA from peripheral blood as a marker of risk for breast cancer.

Breast Cancer Res Treat 2014 Dec 19;148(3):665-73. Epub 2014 Nov 19.

Cancer Epidemiology Centre, Cancer Council of Victoria, 615 St Kilda Road, Melbourne, VIC, 3004, Australia.

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http://link.springer.com/content/pdf/10.1007/s10549-014-3209
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http://link.springer.com/10.1007/s10549-014-3209-y
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http://dx.doi.org/10.1007/s10549-014-3209-yDOI Listing
December 2014