Andrew Free

Andrew Free

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Andrew Free

Andrew Free

Publications by authors named "Andrew Free"

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18Publications

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Diversity-Function Relationships in Natural, Applied, and Engineered Microbial Ecosystems.

Adv Appl Microbiol 2018 9;105:131-189. Epub 2018 Aug 9.

The James Hutton Institute, Craigiebuckler, Aberdeen, United Kingdom.

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https://linkinghub.elsevier.com/retrieve/pii/S00652164183003
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http://dx.doi.org/10.1016/bs.aambs.2018.07.002DOI Listing
August 2019

Assembly of microbial communities in replicate nutrient-cycling model ecosystems follows divergent trajectories, leading to alternate stable states.

Environ Microbiol 2017 08 24;19(8):3374-3386. Epub 2017 Jul 24.

Institute of Quantitative Biology, Biochemistry and Biotechnology, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.

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http://dx.doi.org/10.1111/1462-2920.13849DOI Listing
August 2017

Supra-organismal interactions in the human intestine.

Front Cell Infect Microbiol 2014 23;4:47. Epub 2014 Apr 23.

School of Biological Sciences, Institute of Cell Biology, University of Edinburgh Edinburgh, UK.

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http://dx.doi.org/10.3389/fcimb.2014.00047DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4005949PMC
January 2015

The microbiota and helminths: sharing the same niche in the human host.

Parasitology 2014 Sep 5;141(10):1255-71. Epub 2014 Jun 5.

Institute of Immunology and Infection Research, Centre for Immunity, Infection and Evolution, School of Biological Sciences, Ashworth Laboratories,University of Edinburgh,Edinburgh EH9 3JT,UK.

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http://dx.doi.org/10.1017/S0031182014000699DOI Listing
September 2014

Denaturing gradient gel electrophoresis (DGGE).

Methods Mol Biol 2013 ;1054:145-57

Institute of Cell Biology, University of Edinburgh, Edinburgh, UK.

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http://dx.doi.org/10.1007/978-1-62703-565-1_9DOI Listing
March 2014

Community history affects the predictability of microbial ecosystem development.

ISME J 2014 Jan 29;8(1):19-30. Epub 2013 Aug 29.

Institute of Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.

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http://dx.doi.org/10.1038/ismej.2013.150DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869022PMC
January 2014

Quantitative proteomic analysis of the exoelectrogenic bacterium Arcobacter butzleri ED-1 reveals increased abundance of a flagellin protein under anaerobic growth on an insoluble electrode.

J Proteomics 2013 Jan 12;78:197-210. Epub 2012 Oct 12.

Biological and Environmental Systems Group, ChELSI Institute, Department of Chemical and Biological Engineering, The University of Sheffield, Mappin Street, Sheffield, S1 3JD, United Kingdom.

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http://dx.doi.org/10.1016/j.jprot.2012.09.039DOI Listing
January 2013

Oscillating microbial dynamics driven by small populations, limited nutrient supply and high death rates.

J Theor Biol 2012 Dec 21;314:120-9. Epub 2012 Aug 21.

SUPA, School of Physics and Astronomy, The University of Edinburgh, Mayfield Road, Edinburgh EH9 3JZ, UK.

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https://linkinghub.elsevier.com/retrieve/pii/S00225193120041
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http://dx.doi.org/10.1016/j.jtbi.2012.08.013DOI Listing
December 2012

Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria.

Microbiology 2008 Sep;154(Pt 9):2533-2545

Department of Microbiology, School of Genetics and Microbiology, Moyne Institute of Preventive Medicine, Trinity College, Dublin 2, Ireland.

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http://dx.doi.org/10.1099/mic.0.2008/020693-0DOI Listing
September 2008

Do evolution and ecology need the Gaia hypothesis?

Trends Ecol Evol 2007 Nov 22;22(11):611-9. Epub 2007 Oct 22.

Centre for the Study of Environmental Change and Sustainability, University of Edinburgh, Edinburgh, EH9 3JN, UK.

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http://ac.els-cdn.com/S0169534707002674/1-s2.0-S016953470700
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http://www.cell.com/trends/ecology-evolution/pdf/S0169-5347(
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http://linkinghub.elsevier.com/retrieve/pii/S016953470700267
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http://dx.doi.org/10.1016/j.tree.2007.07.007DOI Listing
November 2007

A truncated H-NS-like protein from enteropathogenic Escherichia coli acts as an H-NS antagonist.

Mol Microbiol 2005 Feb;55(3):808-27

Institute of Structural and Molecular Biology, University of Edinburgh, Darwin Building, The King's Buildings, Mayfield Road, Edinburgh EH9 3JR, UK.

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http://dx.doi.org/10.1111/j.1365-2958.2004.04421.xDOI Listing
February 2005

The LEE1 promoters from both enteropathogenic and enterohemorrhagic Escherichia coli can be activated by PerC-like proteins from either organism.

J Bacteriol 2005 Jan;187(2):458-72

Zoonotic and Animal Pathogens Research Laboratory, Medical Microbiology, University of Edinburgh, Teviot Place, Edinburgh, EH8 9AG, United Kingdom.

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http://dx.doi.org/10.1128/JB.187.2.458-472.2005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC543544PMC
January 2005

Direct and indirect transcriptional activation of virulence genes by an AraC-like protein, PerA from enteropathogenic Escherichia coli.

Mol Microbiol 2004 Nov;54(4):1117-33

Zoonotic and Animal Pathogens Research Laboratory, Medical Microbiology, University of Edinburgh, Teviot Place, Edinburgh, EH8 9AG, UK.

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http://dx.doi.org/10.1111/j.1365-2958.2004.04333.xDOI Listing
November 2004