Publications by authors named "Andreas Rechtsteiner"

28Publications

SET1/COMPASS Maintains Germline Identity by Preventing Transcriptional Deregulation Across Generations.

Front Cell Dev Biol 2020 22;8:561791. Epub 2020 Sep 22.

Laboratory of Biology and Modeling of the Cell, Ecole Normale Supérieure de Lyon, CNRS, Université Claude Bernard de Lyon, Université de Lyon, Lyon, France.

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http://dx.doi.org/10.3389/fcell.2020.561791DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7536326PMC
September 2020

Repression of Germline Genes in Somatic Tissues by H3K9 Dimethylation of Their Promoters.

Genetics 2019 05 25;212(1):125-140. Epub 2019 Mar 25.

Department of Biological Sciences, Marquette University, Milwaukee, Wisconsin 53201

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http://dx.doi.org/10.1534/genetics.118.301878DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6499516PMC
May 2019

Sperm-inherited H3K27me3 impacts offspring transcription and development in C. elegans.

Nat Commun 2019 03 20;10(1):1271. Epub 2019 Mar 20.

Department of Molecular, Cell and Developmental Biology, University of California, Santa Cruz, 1156 High Street, Santa Cruz, CA, 95064, USA.

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http://dx.doi.org/10.1038/s41467-019-09141-wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6426959PMC
March 2019

Caenorhabditis elegans sperm carry a histone-based epigenetic memory of both spermatogenesis and oogenesis.

Nat Commun 2018 10 17;9(1):4310. Epub 2018 Oct 17.

Department of Molecular, Cell and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA, 95064, USA.

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http://dx.doi.org/10.1038/s41467-018-06236-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6193031PMC
October 2018

Two kinesins drive anterograde neuropeptide transport.

Mol Biol Cell 2017 Nov 13;28(24):3542-3553. Epub 2017 Sep 13.

Department of Molecular, Cell, and Developmental Biology, University of California, Santa Cruz, Santa Cruz, CA 95064.

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http://dx.doi.org/10.1091/mbc.E16-12-0820DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5683764PMC
November 2017

Germ Granules Prevent Accumulation of Somatic Transcripts in the Adult Germline.

Genetics 2017 05 3;206(1):163-178. Epub 2017 Mar 3.

Department of Molecular, Cell and Developmental Biology, University of California, Santa Cruz, California 95064

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http://www.genetics.org/lookup/doi/10.1534/genetics.116.1985
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http://dx.doi.org/10.1534/genetics.116.198549DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5419467PMC
May 2017

Reevaluation of whether a soma-to-germ-line transformation extends lifespan in Caenorhabditis elegans.

Proc Natl Acad Sci U S A 2016 Mar 14;113(13):3591-6. Epub 2016 Mar 14.

Department of Molecular, Cell, and Developmental Biology, University of California, Santa Cruz, CA 95064

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http://dx.doi.org/10.1073/pnas.1523402113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4822628PMC
March 2016

Comparative analysis of metazoan chromatin organization.

Nature 2014 Aug;512(7515):449-52

1] Center for Biomedical Informatics, Harvard Medical School, Boston, Massachusetts 02115, USA [2] Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts 02115, USA [3] Informatics Program, Children's Hospital, Boston, Massachusetts 02215, USA.

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http://dx.doi.org/10.1038/nature13415DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4227084PMC
August 2014

Opposing activities of DRM and MES-4 tune gene expression and X-chromosome repression in Caenorhabditis elegans germ cells.

G3 (Bethesda) 2014 Jan 10;4(1):143-53. Epub 2014 Jan 10.

Department of Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts 01605.

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http://dx.doi.org/10.1534/g3.113.007849DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3887530PMC
January 2014

Antagonism between MES-4 and Polycomb repressive complex 2 promotes appropriate gene expression in C. elegans germ cells.

Cell Rep 2012 Nov 25;2(5):1169-77. Epub 2012 Oct 25.

Department of Molecular, Cell and Developmental Biology, University of California, Santa Cruz, CA 95064, USA.

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http://dx.doi.org/10.1016/j.celrep.2012.09.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3513488PMC
November 2012

An inverse relationship to germline transcription defines centromeric chromatin in C. elegans.

Nature 2012 Apr 8;484(7395):534-7. Epub 2012 Apr 8.

Ludwig Institute for Cancer Research and Department of Cellular & Molecular Medicine, University of California San Diego, La Jolla, California 92037, USA.

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http://dx.doi.org/10.1038/nature10973DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3538161PMC
April 2012

The ecoresponsive genome of Daphnia pulex.

Science 2011 Feb;331(6017):555-61

Center for Genomics and Bioinformatics, Indiana University, 915 East Third Street, Bloomington, IN 47405, USA.

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http://www3.nd.edu/~mpfrende/PDFs/Science-2011-Colbourne-555
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http://www.sciencemag.org/cgi/doi/10.1126/science.1197761
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http://dx.doi.org/10.1126/science.1197761DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3529199PMC
February 2011

Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.

Authors:
Mark B Gerstein Zhi John Lu Eric L Van Nostrand Chao Cheng Bradley I Arshinoff Tao Liu Kevin Y Yip Rebecca Robilotto Andreas Rechtsteiner Kohta Ikegami Pedro Alves Aurelien Chateigner Marc Perry Mitzi Morris Raymond K Auerbach Xin Feng Jing Leng Anne Vielle Wei Niu Kahn Rhrissorrakrai Ashish Agarwal Roger P Alexander Galt Barber Cathleen M Brdlik Jennifer Brennan Jeremy Jean Brouillet Adrian Carr Ming-Sin Cheung Hiram Clawson Sergio Contrino Luke O Dannenberg Abby F Dernburg Arshad Desai Lindsay Dick Andréa C Dosé Jiang Du Thea Egelhofer Sevinc Ercan Ghia Euskirchen Brent Ewing Elise A Feingold Reto Gassmann Peter J Good Phil Green Francois Gullier Michelle Gutwein Mark S Guyer Lukas Habegger Ting Han Jorja G Henikoff Stefan R Henz Angie Hinrichs Heather Holster Tony Hyman A Leo Iniguez Judith Janette Morten Jensen Masaomi Kato W James Kent Ellen Kephart Vishal Khivansara Ekta Khurana John K Kim Paulina Kolasinska-Zwierz Eric C Lai Isabel Latorre Amber Leahey Suzanna Lewis Paul Lloyd Lucas Lochovsky Rebecca F Lowdon Yaniv Lubling Rachel Lyne Michael MacCoss Sebastian D Mackowiak Marco Mangone Sheldon McKay Desirea Mecenas Gennifer Merrihew David M Miller Andrew Muroyama John I Murray Siew-Loon Ooi Hoang Pham Taryn Phippen Elicia A Preston Nikolaus Rajewsky Gunnar Rätsch Heidi Rosenbaum Joel Rozowsky Kim Rutherford Peter Ruzanov Mihail Sarov Rajkumar Sasidharan Andrea Sboner Paul Scheid Eran Segal Hyunjin Shin Chong Shou Frank J Slack Cindie Slightam Richard Smith William C Spencer E O Stinson Scott Taing Teruaki Takasaki Dionne Vafeados Ksenia Voronina Guilin Wang Nicole L Washington Christina M Whittle Beijing Wu Koon-Kiu Yan Georg Zeller Zheng Zha Mei Zhong Xingliang Zhou Julie Ahringer Susan Strome Kristin C Gunsalus Gos Micklem X Shirley Liu Valerie Reinke Stuart K Kim LaDeana W Hillier Steven Henikoff Fabio Piano Michael Snyder Lincoln Stein Jason D Lieb Robert H Waterston

Science 2010 Dec 22;330(6012):1775-87. Epub 2010 Dec 22.

Program in Computational Biology and Bioinformatics, Yale University, Bass 432, 266 Whitney Avenue, New Haven, CT 06520, USA.

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http://dx.doi.org/10.1126/science.1196914DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3142569PMC
December 2010

The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny.

PLoS Genet 2010 Sep 2;6(9):e1001091. Epub 2010 Sep 2.

Department of Molecular, Cell, and Developmental Biology, University of California Santa Cruz, Santa Cruz, California, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1001091DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2932692PMC
September 2010

Functional and evolutionary insights from the genomes of three parasitoid Nasonia species.

Authors:
John H Werren Stephen Richards Christopher A Desjardins Oliver Niehuis Jürgen Gadau John K Colbourne John H Werren Stephen Richards Christopher A Desjardins Oliver Niehuis Jürgen Gadau John K Colbourne Leo W Beukeboom Claude Desplan Christine G Elsik Cornelis J P Grimmelikhuijzen Paul Kitts Jeremy A Lynch Terence Murphy Deodoro C S G Oliveira Christopher D Smith Louis van de Zande Kim C Worley Evgeny M Zdobnov Maarten Aerts Stefan Albert Victor H Anaya Juan M Anzola Angel R Barchuk Susanta K Behura Agata N Bera May R Berenbaum Rinaldo C Bertossa Márcia M G Bitondi Seth R Bordenstein Peer Bork Erich Bornberg-Bauer Marleen Brunain Giuseppe Cazzamali Lesley Chaboub Joseph Chacko Dean Chavez Christopher P Childers Jeong-Hyeon Choi Michael E Clark Charles Claudianos Rochelle A Clinton Andrew G Cree Alexandre S Cristino Phat M Dang Alistair C Darby Dirk C de Graaf Bart Devreese Huyen H Dinh Rachel Edwards Navin Elango Eran Elhaik Olga Ermolaeva Jay D Evans Sylvain Foret Gerald R Fowler Daniel Gerlach Joshua D Gibson Donald G Gilbert Dan Graur Stefan Gründer Darren E Hagen Yi Han Frank Hauser Da Hultmark Henry C Hunter Gregory D D Hurst Shalini N Jhangian Huaiyang Jiang Reed M Johnson Andrew K Jones Thomas Junier Tatsuhiko Kadowaki Albert Kamping Yuri Kapustin Bobak Kechavarzi Jaebum Kim Jay Kim Boris Kiryutin Tosca Koevoets Christie L Kovar Evgenia V Kriventseva Robert Kucharski Heewook Lee Sandra L Lee Kristin Lees Lora R Lewis David W Loehlin John M Logsdon Jacqueline A Lopez Ryan J Lozado Donna Maglott Ryszard Maleszka Anoop Mayampurath Danielle J Mazur Marcella A McClure Andrew D Moore Margaret B Morgan Jean Muller Monica C Munoz-Torres Donna M Muzny Lynne V Nazareth Susanne Neupert Ngoc B Nguyen Francis M F Nunes John G Oakeshott Geoffrey O Okwuonu Bart A Pannebakker Vikas R Pejaver Zuogang Peng Stephen C Pratt Reinhard Predel Ling-Ling Pu Hilary Ranson Rhitoban Raychoudhury Andreas Rechtsteiner Justin T Reese Jeffrey G Reid Megan Riddle Hugh M Robertson Jeanne Romero-Severson Miriam Rosenberg Timothy B Sackton David B Sattelle Helge Schlüns Thomas Schmitt Martina Schneider Andreas Schüler Andrew M Schurko David M Shuker Zilá L P Simões Saurabh Sinha Zachary Smith Victor Solovyev Alexandre Souvorov Andreas Springauf Elisabeth Stafflinger Deborah E Stage Mario Stanke Yoshiaki Tanaka Arndt Telschow Carol Trent Selina Vattathil Eveline C Verhulst Lumi Viljakainen Kevin W Wanner Robert M Waterhouse James B Whitfield Timothy E Wilkes Michael Williamson Judith H Willis Florian Wolschin Stefan Wyder Takuji Yamada Soojin V Yi Courtney N Zecher Lan Zhang Richard A Gibbs

Comments on sequence normalization of tiling array expression.

Bioinformatics 2009 Sep 4;25(17):2171-3. Epub 2009 Jul 4.

Department of Biology, Indiana University, Bloomingto, IN, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btp389DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2800354PMC
September 2009

Large-scale testing of bibliome informatics using Pfam protein families.

Pac Symp Biocomput 2006 :76-87

School of Informatics, Indiana University 1900 East Tenth Street, Bloomington, IN 47408, USA.

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January 2007

Evaluation of the host transcriptional response to human cytomegalovirus infection.

Physiol Genomics 2004 Jun 17;18(1):51-62. Epub 2004 Jun 17.

Bioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA.

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http://dx.doi.org/10.1152/physiolgenomics.00155.2003DOI Listing
June 2004