Amy O Charkowski

Amy O Charkowski

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Amy O Charkowski

Amy O Charkowski

Publications by authors named "Amy O Charkowski"

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Detection and Quantification of Sporosori in Soil by Quantitative Real-Time PCR.

Plant Dis 2019 Dec 15;103(12):3189-3198. Epub 2019 Oct 15.

Department of Plant Pathology, North Dakota State University, Fargo, ND 58108.

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http://dx.doi.org/10.1094/PDIS-05-19-1092-REDOI Listing
December 2019

Development of the Automated Primer Design Workflow Uniqprimer and Diagnostic Primers for the Broad-Host-Range Plant Pathogen .

Plant Dis 2019 Nov 20;103(11):2893-2902. Epub 2019 Aug 20.

The Connecticut Agricultural Experiment Station, New Haven, CT 06511, U.S.A.

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http://dx.doi.org/10.1094/PDIS-10-18-1819-REDOI Listing
November 2019

Optimization of an isothermal recombinase polymerase amplification method for real-time detection of Potato virus Y O and N types in potato.

J Virol Methods 2019 05 20;267:16-21. Epub 2019 Feb 20.

Department of Plant Pathology, University of Wisconsin-Madison, 1630 Linden Drive, Madison, WI, 53706, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jviromet.2019.02.006DOI Listing
May 2019

Colorado Seed Potato Certification Data Analysis Shows Mosaic and Blackleg are Major Diseases of Seed Potato and Identifies Tolerant Potato Varieties.

Plant Dis 2019 Feb 28;103(2):192-199. Epub 2018 Dec 28.

Department of Bioagricultural Sciences and Pest Management, Colorado State University.

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http://dx.doi.org/10.1094/PDIS-03-18-0484-REDOI Listing
February 2019

Complete Genome Sequence of Dickeya dianthicola ME23, a Pathogen Causing Blackleg and Soft Rot Diseases of Potato.

Microbiol Resour Announc 2019 Feb 14;8(7). Epub 2019 Feb 14.

Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.

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http://dx.doi.org/10.1128/MRA.01526-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6376422PMC
February 2019

The Changing Face of Bacterial Soft-Rot Diseases.

Authors:
Amy O Charkowski

Annu Rev Phytopathol 2018 08 29;56:269-288. Epub 2018 Jun 29.

Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO 80523-1177, USA; email:

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https://www.annualreviews.org/doi/10.1146/annurev-phyto-0804
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http://dx.doi.org/10.1146/annurev-phyto-080417-045906DOI Listing
August 2018

Perspectives on the Transition From Bacterial Phytopathogen Genomics Studies to Applications Enhancing Disease Management: From Promise to Practice.

Phytopathology 2016 10 19;106(10):1071-1082. Epub 2016 Jul 19.

First and fourth authors: Department of Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing; second and fifth authors: Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Science, University of Florida, Lake Alfred; third author: Department of Plant Pathology, University of Wisconsin-Madison; sixth author: Department of Crop Sciences, University of Illinois at Urbana-Champaign.

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http://dx.doi.org/10.1094/PHYTO-03-16-0117-FIDOI Listing
October 2016

Integrated Control of Potato Pathogens Through Seed Potato Certification and Provision of Clean Seed Potatoes.

Plant Dis 2013 Oct;97(10):1268-1280

Department of Plant Pathology, University of Wisconsin, Madison.

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http://apsjournals.apsnet.org/doi/10.1094/PDIS-05-13-0477-FE
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http://dx.doi.org/10.1094/PDIS-05-13-0477-FEDOI Listing
October 2013

Salmonella enterica suppresses Pectobacterium carotovorum subsp. carotovorum population and soft rot progression by acidifying the microaerophilic environment.

mBio 2013 Feb 12;4(1):e00557-12. Epub 2013 Feb 12.

Department of Plant Pathology, University of Wisconsin-Madison, Madison, Wisconsin, USA.

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http://dx.doi.org/10.1128/mBio.00557-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3573663PMC
February 2013

The 3-hydroxy-2-butanone pathway is required for Pectobacterium carotovorum pathogenesis.

PLoS One 2011 18;6(8):e22974. Epub 2011 Aug 18.

Department of Plant Pathology, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0022974PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158072PMC
December 2011

The Dickeya dadantii biofilm matrix consists of cellulose nanofibres, and is an emergent property dependent upon the type III secretion system and the cellulose synthesis operon.

Microbiology 2011 Oct 30;157(Pt 10):2733-2744. Epub 2011 Jun 30.

Department of Plant Pathology, University of Wisconsin-Madison, Madison, WI 53706, USA.

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http://dx.doi.org/10.1099/mic.0.051003-0DOI Listing
October 2011

Soft Rot Disease Severity Is Affected by Potato Physiology and Pectobacterium taxa.

Plant Dis 2011 Mar;95(3):232-241

Department of Plant Pathology, University of Wisconsin-Madison.

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http://dx.doi.org/10.1094/PDIS-07-10-0526DOI Listing
March 2011

Phylogeny and virulence of naturally occurring type III secretion system-deficient Pectobacterium strains.

Appl Environ Microbiol 2009 Jul 1;75(13):4539-49. Epub 2009 May 1.

Department of Plant Pathology, University of Wisconsin-Madison, 53706, USA.

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http://dx.doi.org/10.1128/AEM.01336-08DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2704834PMC
July 2009

Decaying signals: will understanding bacterial-plant communications lead to control of soft rot?

Authors:
Amy O Charkowski

Curr Opin Biotechnol 2009 Apr 25;20(2):178-84. Epub 2009 Feb 25.

Department of Plant Pathology, University of Wisconsin-Madison, Madison, WI 53706, USA.

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http://dx.doi.org/10.1016/j.copbio.2009.01.005DOI Listing
April 2009

The plant phenolic compound p-coumaric acid represses gene expression in the Dickeya dadantii type III secretion system.

Appl Environ Microbiol 2009 Mar 29;75(5):1223-8. Epub 2008 Dec 29.

Department of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, Wisconsin 53211, USA.

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http://aem.asm.org/cgi/doi/10.1128/AEM.02015-08
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http://dx.doi.org/10.1128/AEM.02015-08DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648153PMC
March 2009

The flagellar sigma factor fliA is required for Dickeya dadantii virulence.

Mol Plant Microbe Interact 2008 Nov;21(11):1431-42

Department of Plant Pathology, University of Wisconsin, Madison, WI 53706, USA.

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http://dx.doi.org/10.1094/MPMI-21-11-1431DOI Listing
November 2008

Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation.

J Microbiol Methods 2008 Oct 15;75(2):318-24. Epub 2008 Jul 15.

Department of Plant Pathology, 1630 Linden drive, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://gene-quantification.eu/jahn-bak-rna-extraction-2008.p
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http://linkinghub.elsevier.com/retrieve/pii/S016770120800254
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http://dx.doi.org/10.1016/j.mimet.2008.07.004DOI Listing
October 2008

The Response regulator HrpY of Dickeya dadantii 3937 regulates virulence genes not linked to the hrp cluster.

Mol Plant Microbe Interact 2008 Mar;21(3):304-14

Department of Plant Pathology, University of Wisconsin-Madison, Madison 53706, USA.

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http://dx.doi.org/10.1094/MPMI-21-3-0304DOI Listing
March 2008

The role of cellulose and O-antigen capsule in the colonization of plants by Salmonella enterica.

Mol Plant Microbe Interact 2007 Sep;20(9):1083-91

Produce Safety and Microbiology Research Unit, United States Department of Agriculture-Agricultural Research Service, Albany, CA 94710, USA.

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http://dx.doi.org/10.1094/MPMI-20-9-1083DOI Listing
September 2007

Global effect of indole-3-acetic acid biosynthesis on multiple virulence factors of Erwinia chrysanthemi 3937.

Appl Environ Microbiol 2007 Feb 22;73(4):1079-88. Epub 2006 Dec 22.

Department of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI 53211, USA.

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http://dx.doi.org/10.1128/AEM.01770-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1828641PMC
February 2007

Population behavior analysis of dspE and pelD regulation in Erwinia chrysanthemi 3937.

Mol Plant Microbe Interact 2006 Apr;19(4):451-7

Department of Biological Sciences, University of Wisconsin, Milwaukee 53211, USA.

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http://dx.doi.org/10.1094/MPMI-19-0451DOI Listing
April 2006

Harpin mediates cell aggregation in Erwinia chrysanthemi 3937.

J Bacteriol 2006 Mar;188(6):2280-4

Department of Plant Pathology, 1630 Linden Dr., University of Wisconsin-Madison, Madison, WI 53706, USA.

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http://dx.doi.org/10.1128/JB.188.6.2280-2284.2006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1428125PMC
March 2006

Salmonella enterica virulence genes are required for bacterial attachment to plant tissue.

Appl Environ Microbiol 2005 Oct;71(10):5685-91

USDA, ARS, WRRC, Produce Safety and Microbiology, 800 Buchanan St., Albany, CA 94710, USA.

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http://dx.doi.org/10.1128/AEM.71.10.5685-5691.2005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1265987PMC
October 2005

The Erwinia chrysanthemi type III secretion system is required for multicellular behavior.

J Bacteriol 2005 Jan;187(2):639-48

Department of Plant Pathology, 1630 Linden Dr., University of Wisconsin-Madison, Madison, WI 53706, USA.

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http://jb.asm.org/cgi/doi/10.1128/JB.187.2.639-648.2005
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http://dx.doi.org/10.1128/JB.187.2.639-648.2005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC543537PMC
January 2005

Genomic diversity of Erwinia carotovora subsp. carotovora and its correlation with virulence.

Appl Environ Microbiol 2004 May;70(5):3013-23

Department of Plant Pathology, Russell Laboratories, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC404413PMC
http://dx.doi.org/10.1128/aem.70.5.3013-3023.2004DOI Listing
May 2004

Cross-contamination of lettuce with Escherichia coli O157:H7.

J Food Prot 2002 Mar;65(3):465-70

US Department of Agriculture, Agricultural Research Service, Albany, California 94710, USA.

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http://dx.doi.org/10.4315/0362-028x-65.3.465DOI Listing
March 2002