Publications by authors named "Amanda M Larracuente"

23Publications

RepeatProfiler: A pipeline for visualization and comparative analysis of repetitive DNA profiles.

Authors:
Sherif Negm Anya Greenberg Amanda M Larracuente John S Sproul

Mol Ecol Resour 2020 Dec 4. Epub 2020 Dec 4.

Department of Biology, University of Rochester, Rochester, NY, USA.

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December 2020

Resistance to natural and synthetic gene drive systems.

Authors:
Tom A R Price Nikolai Windbichler Robert L Unckless Andreas Sutter Jan-Niklas Runge Perran A Ross Andrew Pomiankowski Nicole L Nuckolls Catherine Montchamp-Moreau Nicole Mideo Oliver Y Martin Andri Manser Mathieu Legros Amanda M Larracuente Luke Holman John Godwin Neil Gemmell Cécile Courret Anna Buchman Luke G Barrett Anna K Lindholm

J Evol Biol 2020 Oct 24;33(10):1345-1360. Epub 2020 Sep 24.

Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland.

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October 2020

Dynamic Evolution of Euchromatic Satellites on the X Chromosome in Drosophila melanogaster and the simulans Clade.

Authors:
John S Sproul Danielle E Khost Danna G Eickbush Sherif Negm Xiaolu Wei Isaac Wong Amanda M Larracuente

Mol Biol Evol 2020 08;37(8):2241-2256

Department of Biology, University of Rochester, Rochester, NY.

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August 2020

Meiotic drive mechanisms: lessons from .

Authors:
Cécile Courret Ching-Ho Chang Kevin H-C Wei Catherine Montchamp-Moreau Amanda M Larracuente

Proc Biol Sci 2019 10 23;286(1913):20191430. Epub 2019 Oct 23.

Department of Biology, University of Rochester, Rochester, NY, USA.

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October 2019

Islands of retroelements are major components of Drosophila centromeres.

Authors:
Ching-Ho Chang Ankita Chavan Jason Palladino Xiaolu Wei Nuno M C Martins Bryce Santinello Chin-Chi Chen Jelena Erceg Brian J Beliveau Chao-Ting Wu Amanda M Larracuente Barbara G Mellone

PLoS Biol 2019 05 14;17(5):e3000241. Epub 2019 May 14.

Department of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, United States of America.

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May 2019

Heterochromatin-Enriched Assemblies Reveal the Sequence and Organization of the Y Chromosome.

Authors:
Ching-Ho Chang Amanda M Larracuente

Genetics 2019 01 12;211(1):333-348. Epub 2018 Nov 12.

Department of Biology, University of Rochester, New York 14627

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January 2019

Firefly genomes illuminate parallel origins of bioluminescence in beetles.

Authors:
Timothy R Fallon Sarah E Lower Ching-Ho Chang Manabu Bessho-Uehara Gavin J Martin Adam J Bewick Megan Behringer Humberto J Debat Isaac Wong John C Day Anton Suvorov Christian J Silva Kathrin F Stanger-Hall David W Hall Robert J Schmitz David R Nelson Sara M Lewis Shuji Shigenobu Seth M Bybee Amanda M Larracuente Yuichi Oba Jing-Ke Weng

Elife 2018 10 16;7. Epub 2018 Oct 16.

Whitehead Institute for Biomedical Research, Cambridge, United States.

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October 2018

Single-molecule sequencing resolves the detailed structure of complex satellite DNA loci in .

Authors:
Daniel E Khost Danna G Eickbush Amanda M Larracuente

Genome Res 2017 05 3;27(5):709-721. Epub 2017 Apr 3.

Department of Biology, University of Rochester, Rochester, New York 14627, USA.

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May 2017

Genomic changes following the reversal of a Y chromosome to an autosome in Drosophila pseudoobscura.

Authors:
Ching-Ho Chang Amanda M Larracuente

Evolution 2017 05 10;71(5):1285-1296. Epub 2017 Apr 10.

Department of Biology, University of Rochester, Rochester, New York, 14627.

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May 2017

Host-Symbiont Interactions: Male-Killers Exposed.

Authors:
Amanda M Larracuente Victoria H Meller

Curr Biol 2016 05;26(10):R429-31

Department of Biological Sciences, Wayne State University, Detroit, MI 48202, USA. Electronic address:

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May 2016

The Ecology and Evolutionary Dynamics of Meiotic Drive.

Authors:
Anna K Lindholm Kelly A Dyer Renée C Firman Lila Fishman Wolfgang Forstmeier Luke Holman Hanna Johannesson Ulrich Knief Hanna Kokko Amanda M Larracuente Andri Manser Catherine Montchamp-Moreau Varos G Petrosyan Andrew Pomiankowski Daven C Presgraves Larisa D Safronova Andreas Sutter Robert L Unckless Rudi L Verspoor Nina Wedell Gerald S Wilkinson Tom A R Price

Trends Ecol Evol 2016 Apr 23;31(4):315-326. Epub 2016 Feb 23.

Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK.

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April 2016

Genetics on the Fly: A Primer on the Drosophila Model System.

Authors:
Karen G Hales Christopher A Korey Amanda M Larracuente David M Roberts

Genetics 2015 Nov;201(3):815-42

Biology Department, Franklin and Marshall College, Lancaster, Pennsylvania 17604.

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November 2015

Origin, evolution, and population genetics of the selfish Segregation Distorter gene duplication in European and African populations of Drosophila melanogaster.

Authors:
Cara L Brand Amanda M Larracuente Daven C Presgraves

Evolution 2015 05 29;69(5):1271-83. Epub 2015 Apr 29.

Department of Biology, University of Rochester, Rochester, New York, 14627.

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May 2015

Simple method for fluorescence DNA in situ hybridization to squashed chromosomes.

Authors:
Amanda M Larracuente Patrick M Ferree

J Vis Exp 2015 Jan 6(95):52288. Epub 2015 Jan 6.

W. M. Keck Science Department, Claremont McKenna, Pitzer, and Scripps Colleges;

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January 2015

Sex-ratio meiotic drive and Y-linked resistance in Drosophila affinis.

Authors:
Robert L Unckless Amanda M Larracuente Andrew G Clark

Genetics 2015 Mar 8;199(3):831-40. Epub 2015 Jan 8.

Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853.

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March 2015

The organization and evolution of the Responder satellite in species of the Drosophila melanogaster group: dynamic evolution of a target of meiotic drive.

Authors:
Amanda M Larracuente

BMC Evol Biol 2014 Nov 25;14:233. Epub 2014 Nov 25.

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November 2014

Recent selection on the Y-to-dot translocation in Drosophila pseudoobscura.

Authors:
Amanda M Larracuente Andrew G Clark

Mol Biol Evol 2014 Apr 3;31(4):846-56. Epub 2014 Jan 3.

Molecular Biology and Genetics, Cornell University.

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April 2014

Surprising differences in the variability of Y chromosomes in African and cosmopolitan populations of Drosophila melanogaster.

Authors:
Amanda M Larracuente Andrew G Clark

Genetics 2013 Jan 19;193(1):201-14. Epub 2012 Oct 19.

Molecular Biology and Genetics, Cornell University, NY 14853, USA.

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January 2013

The selfish Segregation Distorter gene complex of Drosophila melanogaster.

Authors:
Amanda M Larracuente Daven C Presgraves

Genetics 2012 Sep;192(1):33-53

Department of Biology, University of Rochester, Rochester, New York 14627, USA.

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September 2012

Translocation of Y-linked genes to the dot chromosome in Drosophila pseudoobscura.

Authors:
Amanda M Larracuente Mohamed A F Noor Andrew G Clark

Mol Biol Evol 2010 Jul 10;27(7):1612-20. Epub 2010 Feb 10.

Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA.

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July 2010