Allyson Lister

Allyson Lister

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Allyson Lister

Allyson Lister

Publications by authors named "Allyson Lister"

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The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation.

J Biomed Semantics 2014 2;5:25. Epub 2014 Jun 2.

School of Computer Science, University of Manchester, Oxford Road, Manchester, M13 9PL, UK.

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http://dx.doi.org/10.1186/2041-1480-5-25DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4098953PMC
July 2014

Annotation of SBML models through rule-based semantic integration.

J Biomed Semantics 2010 Jun 22;1 Suppl 1:S3. Epub 2010 Jun 22.

Centre for Integrated Systems Biology of Ageing and Nutrition, Institute for Ageing and Health, Newcastle University, Campus for Ageing and Vitality, Newcastle upon Tyne NE4 5PL, UK.

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http://dx.doi.org/10.1186/2041-1480-1-S1-S3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2903722PMC
June 2010

Managing experimental data using FuGE.

Methods Mol Biol 2010 ;604:333-43

Department of Pre-clinical Veterinary Science, Faculty of Veterinary Science, University of Liverpool, Liverpool, UK.

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http://dx.doi.org/10.1007/978-1-60761-444-9_23DOI Listing
February 2010

Live Coverage of Intelligent Systems for Molecular Biology/European Conference on computational biology (ISMB/ECCB) 2009.

PLoS Comput Biol 2010 Jan 29;6(1):e1000640. Epub 2010 Jan 29.

Centre for Integrated Systems Biology of Ageing and Nutrition, Institute for Ageing and Health, Newcastle University, Campus for Ageing and Vitality, Newcastle upon Tyne, United Kingdom.

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https://dx.plos.org/10.1371/journal.pcbi.1000640
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http://dx.doi.org/10.1371/journal.pcbi.1000640DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2813254PMC
January 2010

Live coverage of scientific conferences using web technologies.

PLoS Comput Biol 2010 Jan 29;6(1):e1000563. Epub 2010 Jan 29.

Centre for Integrated Systems Biology of Ageing and Nutrition, Institute for Ageing and Health, Newcastle University, Campus for Ageing and Vitality, Newcastle upon Tyne, United Kingdom.

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http://dx.doi.org/10.1371/journal.pcbi.1000563DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2813255PMC
January 2010

Saint: a lightweight integration environment for model annotation.

Bioinformatics 2009 Nov 4;25(22):3026-7. Epub 2009 Sep 4.

Centre for Integrated Systems Biology of Ageing and Nutrition, Newcastle University and School of Computing Science, Newcastle University, Newcastle Upon Tyne, UK.

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http://dx.doi.org/10.1093/bioinformatics/btp523DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2773255PMC
November 2009

Interfacing systems biology and synthetic biology.

Genome Biol 2009 26;10(6):309. Epub 2009 Jun 26.

Centre for Integrated Systems Biology of Ageing and Nutrition (CISBAN) and School of Computing Science, Newcastle University, Newcastle upon Tyne NE1 7RU, UK.

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http://genomebiology.biomedcentral.com/articles/10.1186/gb-2
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http://dx.doi.org/10.1186/gb-2009-10-6-309DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2718492PMC
September 2009

Modeling and managing experimental data using FuGE.

OMICS 2009 Jun;13(3):239-51

Department of Preclinical Veterinary Science, Faculty of Veterinary Science, University of Liverpool, Liverpool, United Kingdom.

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http://dx.doi.org/10.1089/omi.2008.0080DOI Listing
June 2009