Alexandre Masselot

Alexandre Masselot

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Alexandre Masselot

Alexandre Masselot

Publications by authors named "Alexandre Masselot"

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21Publications

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MsViz: A Graphical Software Tool for In-Depth Manual Validation and Quantitation of Post-translational Modifications.

J Proteome Res 2017 08 6;16(8):3092-3101. Epub 2017 Jul 6.

Protein Analysis Facility, Center for Integrative Genomics, University of Lausanne , CH-1015 Lausanne, Switzerland.

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http://pubs.acs.org/doi/10.1021/acs.jproteome.7b00194
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http://dx.doi.org/10.1021/acs.jproteome.7b00194DOI Listing
August 2017

Ubiquitination profiling identifies sensitivity factors for IAP antagonist treatment.

Biochem J 2015 Feb;466(1):45-54

*Departments of Early Discovery Biochemistry, Genentech, Inc. South San Francisco, CA 94080, U.S.A.

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http://dx.doi.org/10.1042/BJ20141195DOI Listing
February 2015

Visualization of protein sequence features using JavaScript and SVG with pViz.js.

Bioinformatics 2014 Dec 21;30(23):3408-9. Epub 2014 Aug 21.

Department of Bioinformatics and Computational Biology, Genentech Inc., South San Francisco, CA 94080, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btu567DOI Listing
December 2014

Structure of the BRAF-MEK complex reveals a kinase activity independent role for BRAF in MAPK signaling.

Cancer Cell 2014 Sep 21;26(3):402-413. Epub 2014 Aug 21.

Department of Biochemical and Cellular Pharmacology, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ccr.2014.07.007DOI Listing
September 2014

neXtProt: a knowledge platform for human proteins.

Nucleic Acids Res 2012 Jan 1;40(Database issue):D76-83. Epub 2011 Dec 1.

CALIPHO Group, Swiss Institute of Bioinformatics, CMU - 1, Rue Michel Servet 1211 Geneva 4, Switzerland.

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http://dx.doi.org/10.1093/nar/gkr1179DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245017PMC
January 2012

Early activation of the fatty acid metabolism pathway by chronic high glucose exposure in rat insulin secretory beta-cells.

Proteomics 2010 Jan;10(1):59-71

Biomedical Proteomics Research Group, Structural Biology and Bioinformatics Department, Centre Médical Universitaire, Geneva, Switzerland.

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http://dx.doi.org/10.1002/pmic.200900080DOI Listing
January 2010

SwissPIT: An workflow-based platform for analyzing tandem-MS spectra using the Grid.

Proteomics 2009 May;9(10):2648-55

Swiss Institute of Bioinformatics, Proteome Informatics Group, Geneva, Switzerland.

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http://dx.doi.org/10.1002/pmic.200800207DOI Listing
May 2009

A simple workflow to increase MS2 identification rate by subsequent spectral library search.

Proteomics 2009 Mar;9(6):1731-6

Swiss Institute of Bioinformatics, Proteome Informatics Group, Geneva, Switzerland.

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http://dx.doi.org/10.1002/pmic.200800410DOI Listing
March 2009

swissPIT: a novel approach for pipelined analysis of mass spectrometry data.

Bioinformatics 2008 Jun 23;24(11):1416-7. Epub 2008 Apr 23.

Swiss Institute of Bioinformatics, Proteome Informatics Group, Geneva, Geneva Bioinformatics (GeneBio) S.A., Geneva, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btn139DOI Listing
June 2008

Assessing peptide de novo sequencing algorithms performance on large and diverse data sets.

Proteomics 2007 Sep;7(17):3051-4

Bioinformatics Department, Upper Austria University of Applied Sciences at Hagenberg, Hagenberg, Austria.

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http://dx.doi.org/10.1002/pmic.200700224DOI Listing
September 2007

InSilicoSpectro: an open-source proteomics library.

J Proteome Res 2006 Mar;5(3):619-24

Upper Austria University of Applied Sciences at Hagenberg, Bioinformatics Department, Hauptstrasse 117, A-4232 Hagenberg, Austria.

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http://dx.doi.org/10.1021/pr0504236DOI Listing
March 2006

OLAV-PMF: a novel scoring scheme for high-throughput peptide mass fingerprinting.

J Proteome Res 2004 Jan-Feb;3(1):55-60

Geneprot Inc, 2 rue Pré-de-la-Fontaine, CH-1217 Meyrin, Switzerland.

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http://dx.doi.org/10.1021/pr034055mDOI Listing
October 2004

Improved peptide charge state assignment.

Proteomics 2003 Aug;3(8):1434-40

GeneProt Inc., Pré de la Fontaine 2, CH-1217 Meyrin, Switzerland.

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http://doi.wiley.com/10.1002/pmic.200300489
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http://dx.doi.org/10.1002/pmic.200300489DOI Listing
August 2003

OLAV: towards high-throughput tandem mass spectrometry data identification.

Proteomics 2003 Aug;3(8):1454-63

GeneProt Inc., Pré de la Fontaine 2, CH-1217 Meyrin, Switzerland.

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http://doi.wiley.com/10.1002/pmic.200300485
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http://dx.doi.org/10.1002/pmic.200300485DOI Listing
August 2003