Publications by authors named "Alexandra Gavryushkina"

8Publications

ncVarDB: a manually curated database for pathogenic non-coding variants and benign controls.

Database (Oxford) 2020 12;2020

Department of Biochemistry, University of Otago, PO Box 56, Dunedin 9054, New Zealand.

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December 2020

Closing the gap between palaeontological and neontological speciation and extinction rate estimates.

Nat Commun 2018 12 7;9(1):5237. Epub 2018 Dec 7.

Swiss Institute of Bioinformatics (SIB), 1015, Lausanne, Switzerland.

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December 2018

The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes.

J Theor Biol 2018 06 14;447:41-55. Epub 2018 Mar 14.

Department of Ecology, Evolution, & Organismal Biology, Iowa State University, Ames, Iowa 50011, USA.

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June 2018

Bayesian Total-Evidence Dating Reveals the Recent Crown Radiation of Penguins.

Syst Biol 2017 Jan;66(1):57-73

Centre for Computational Evolution, University of Auckland, Auckland, New Zealand.

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January 2017

Sources of HIV infection among men having sex with men and implications for prevention.

Sci Transl Med 2016 Jan;8(320):320ra2

Department of Infectious Disease Epidemiology, School of Public Health, Imperial College London, London W21PG, UK.

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January 2016

Bayesian inference of sampled ancestor trees for epidemiology and fossil calibration.

PLoS Comput Biol 2014 Dec 4;10(12):e1003919. Epub 2014 Dec 4.

Department of Computer Science, University of Auckland, Auckland, New Zealand; Allan Wilson Centre for Molecular Ecology and Evolution, Massey University, Palmerston North, New Zealand.

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December 2014

Recursive algorithms for phylogenetic tree counting.

Algorithms Mol Biol 2013 Oct 28;8(1):26. Epub 2013 Oct 28.

Department of Computer Science, The University of Auckland, Auckland, New Zealand.

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October 2013