Publications by authors named "Alexander W Bruce"

27Publications

Is a Novel Cell Division Regulator During Preimplantation Mouse Embryo Lineage Formation and Oogenesis.

Front Cell Dev Biol 2020 17;8:857. Epub 2020 Sep 17.

Laboratory of Early Mammalian Developmental Biology, Department of Molecular Biology and Genetics, Faculty of Science, University of South Bohemia, České Budějovice, Czechia.

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http://dx.doi.org/10.3389/fcell.2020.00857DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7527741PMC
September 2020

Age-related differences in the translational landscape of mammalian oocytes.

Aging Cell 2020 Sep 20:e13231. Epub 2020 Sep 20.

Laboratory of Biochemistry and Molecular Biology of Germ Cells, Institute of Animal Physiology and Genetics, CAS, Libechov, Czech Republic.

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http://dx.doi.org/10.1111/acel.13231DOI Listing
September 2020

Identifying the Translatome of Mouse NEBD-Stage Oocytes via SSP-Profiling; A Novel Polysome Fractionation Method.

Int J Mol Sci 2020 Feb 13;21(4). Epub 2020 Feb 13.

Laboratory of RNA Biochemistry, Department of Genetics and Microbiology, Faculty of Science, Charles University, Viničná 5, 128 44, 2 Prague, Czech Republic.

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http://dx.doi.org/10.3390/ijms21041254DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7072993PMC
February 2020

p38-Mitogen Activated Kinases Mediate a Developmental Regulatory Response to Amino Acid Depletion and Associated Oxidative Stress in Mouse Blastocyst Embryos.

Front Cell Dev Biol 2019 8;7:276. Epub 2019 Nov 8.

Laboratory of Early Mammalian Developmental Biology, Department of Molecular Biology and Genetics, Faculty of Science, University of South Bohemia, České Budějovice, Czechia.

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http://dx.doi.org/10.3389/fcell.2019.00276DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856562PMC
November 2019

Increased Expression of Maturation Promoting Factor Components Speeds Up Meiosis in Oocytes from Aged Females.

Int J Mol Sci 2018 Sep 19;19(9). Epub 2018 Sep 19.

Laboratory of Biochemistry and Molecular Biology of Germ Cells, Institute of Animal Physiology and Genetics, CAS, Rumburska 89, 277 21 Libechov, Czech Republic.

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http://dx.doi.org/10.3390/ijms19092841DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6164426PMC
September 2018

The first cell-fate decision of mouse preimplantation embryo development: integrating cell position and polarity.

Open Biol 2017 11;7(11)

Laboratory of Developmental Biology and Genetics (LDB&G), Department of Molecular Biology and Genetics, Faculty of Science, University of South Bohemia, Branišovská 31, 37005 České Budějovice, Czech Republic

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http://dx.doi.org/10.1098/rsob.170210DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5717349PMC
November 2017

p38 (Mapk14/11) occupies a regulatory node governing entry into primitive endoderm differentiation during preimplantation mouse embryo development.

Open Biol 2016 09;6(9)

Laboratory of Developmental Biology and Genetics (LDB&G), Department of Molecular Biology, Faculty of Science, University of South Bohemia, Branišovská 31, 37005 České Budějovice, Czech Republic Biology Centre of the Czech Academy of Sciences, Institute of Entomology, Branišovská 31, 37005 České Budějovice, Czech Republic

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5043583PMC
http://dx.doi.org/10.1098/rsob.160190DOI Listing
September 2016

Rho-associated protein kinase regulates subcellular localisation of Angiomotin and Hippo-signalling during preimplantation mouse embryo development.

Reprod Biomed Online 2016 Sep 1;33(3):381-90. Epub 2016 Jul 1.

Laboratory of Developmental Biology and Genetics (LDB & G), Department of Molecular Biology, Faculty of Science, University of South Bohemia, Branišovská 31, České Budějovice 37005, Czech Republic; Institute of Entomology, Biology Centre of the Czech Academy of Sciences, Branišovská 31, České Budějovice 37005, Czech Republic. Electronic address:

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http://dx.doi.org/10.1016/j.rbmo.2016.06.028DOI Listing
September 2016

The first two cell-fate decisions of preimplantation mouse embryo development are not functionally independent.

Sci Rep 2015 Oct 13;5:15034. Epub 2015 Oct 13.

Laboratory of Developmental Biology &Genetics (LDB&G), Department of Molecular Biology, Faculty of Science, University of South Bohemia, Branišovská 31, 37005 České Budějovice, CZECH REPUBLIC.

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http://dx.doi.org/10.1038/srep15034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4602213PMC
October 2015

Generating different genetic expression patterns in the early embryo: insights from the mouse model.

Reprod Biomed Online 2013 Dec 14;27(6):586-92. Epub 2013 May 14.

Laboratory of Developmental Biology and Genetics, Department of Molecular Biology, Faculty of Science, University of South Bohemia, Branišovská 31, 37005 České Budějovice (Budweis), Czech Republic; Institute of Entomology, Biology Centre of the Czech Academy of Sciences in České Budějovice, Branišovská 31, 37005 České Budějovice (Budweis), Czech Republic. Electronic address:

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http://dx.doi.org/10.1016/j.rbmo.2013.03.024DOI Listing
December 2013

What is the role of maternally provided Cdx2 mRNA in early mouse embryogenesis?

Reprod Biomed Online 2011 Jun 13;22(6):512-5. Epub 2011 Feb 13.

Laboratory of Developmental Biology & Genetics, Department of Molecular Biology, Faculty of Science, University of South Bohemia, Branišovská 31, 37005 České Budějovice, Czech Republic.

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http://dx.doi.org/10.1016/j.rbmo.2011.02.003DOI Listing
June 2011

Developmental control of the early mammalian embryo: competition among heterogeneous cells that biases cell fate.

Curr Opin Genet Dev 2010 Oct 14;20(5):485-91. Epub 2010 Jun 14.

The Gurdon Institute, University of Cambridge, Cambridge CB2 1QN, United Kingdom.

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http://dx.doi.org/10.1016/j.gde.2010.05.006DOI Listing
October 2010

Making a firm decision: multifaceted regulation of cell fate in the early mouse embryo.

Nat Rev Genet 2009 Jul;10(7):467-77

The Gurdon Institute, University of Cambridge, Tennis Court Road, Cambridge CB2 1QN, UK. m.zernicka-goetz@

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http://dx.doi.org/10.1038/nrg2564DOI Listing
July 2009

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

Authors:
Ewan Birney John A Stamatoyannopoulos Anindya Dutta Roderic Guigó Thomas R Gingeras Elliott H Margulies Zhiping Weng Michael Snyder Emmanouil T Dermitzakis Robert E Thurman Michael S Kuehn Christopher M Taylor Shane Neph Christoph M Koch Saurabh Asthana Ankit Malhotra Ivan Adzhubei Jason A Greenbaum Robert M Andrews Paul Flicek Patrick J Boyle Hua Cao Nigel P Carter Gayle K Clelland Sean Davis Nathan Day Pawandeep Dhami Shane C Dillon Michael O Dorschner Heike Fiegler Paul G Giresi Jeff Goldy Michael Hawrylycz Andrew Haydock Richard Humbert Keith D James Brett E Johnson Ericka M Johnson Tristan T Frum Elizabeth R Rosenzweig Neerja Karnani Kirsten Lee Gregory C Lefebvre Patrick A Navas Fidencio Neri Stephen C J Parker Peter J Sabo Richard Sandstrom Anthony Shafer David Vetrie Molly Weaver Sarah Wilcox Man Yu Francis S Collins Job Dekker Jason D Lieb Thomas D Tullius Gregory E Crawford Shamil Sunyaev William S Noble Ian Dunham France Denoeud Alexandre Reymond Philipp Kapranov Joel Rozowsky Deyou Zheng Robert Castelo Adam Frankish Jennifer Harrow Srinka Ghosh Albin Sandelin Ivo L Hofacker Robert Baertsch Damian Keefe Sujit Dike Jill Cheng Heather A Hirsch Edward A Sekinger Julien Lagarde Josep F Abril Atif Shahab Christoph Flamm Claudia Fried Jörg Hackermüller Jana Hertel Manja Lindemeyer Kristin Missal Andrea Tanzer Stefan Washietl Jan Korbel Olof Emanuelsson Jakob S Pedersen Nancy Holroyd Ruth Taylor David Swarbreck Nicholas Matthews Mark C Dickson Daryl J Thomas Matthew T Weirauch James Gilbert Jorg Drenkow Ian Bell XiaoDong Zhao K G Srinivasan Wing-Kin Sung Hong Sain Ooi Kuo Ping Chiu Sylvain Foissac Tyler Alioto Michael Brent Lior Pachter Michael L Tress Alfonso Valencia Siew Woh Choo Chiou Yu Choo Catherine Ucla Caroline Manzano Carine Wyss Evelyn Cheung Taane G Clark James B Brown Madhavan Ganesh Sandeep Patel Hari Tammana Jacqueline Chrast Charlotte N Henrichsen Chikatoshi Kai Jun Kawai Ugrappa Nagalakshmi Jiaqian Wu Zheng Lian Jin Lian Peter Newburger Xueqing Zhang Peter Bickel John S Mattick Piero Carninci Yoshihide Hayashizaki Sherman Weissman Tim Hubbard Richard M Myers Jane Rogers Peter F Stadler Todd M Lowe Chia-Lin Wei Yijun Ruan Kevin Struhl Mark Gerstein Stylianos E Antonarakis Yutao Fu Eric D Green Ulaş Karaöz Adam Siepel James Taylor Laura A Liefer Kris A Wetterstrand Peter J Good Elise A Feingold Mark S Guyer Gregory M Cooper George Asimenos Colin N Dewey Minmei Hou Sergey Nikolaev Juan I Montoya-Burgos Ari Löytynoja Simon Whelan Fabio Pardi Tim Massingham Haiyan Huang Nancy R Zhang Ian Holmes James C Mullikin Abel Ureta-Vidal Benedict Paten Michael Seringhaus Deanna Church Kate Rosenbloom W James Kent Eric A Stone Serafim Batzoglou Nick Goldman Ross C Hardison David Haussler Webb Miller Arend Sidow Nathan D Trinklein Zhengdong D Zhang Leah Barrera Rhona Stuart David C King Adam Ameur Stefan Enroth Mark C Bieda Jonghwan Kim Akshay A Bhinge Nan Jiang Jun Liu Fei Yao Vinsensius B Vega Charlie W H Lee Patrick Ng Atif Shahab Annie Yang Zarmik Moqtaderi Zhou Zhu Xiaoqin Xu Sharon Squazzo Matthew J Oberley David Inman Michael A Singer Todd A Richmond Kyle J Munn Alvaro Rada-Iglesias Ola Wallerman Jan Komorowski Joanna C Fowler Phillippe Couttet Alexander W Bruce Oliver M Dovey Peter D Ellis Cordelia F Langford David A Nix Ghia Euskirchen Stephen Hartman Alexander E Urban Peter Kraus Sara Van Calcar Nate Heintzman Tae Hoon Kim Kun Wang Chunxu Qu Gary Hon Rosa Luna Christopher K Glass M Geoff Rosenfeld Shelley Force Aldred Sara J Cooper Anason Halees Jane M Lin Hennady P Shulha Xiaoling Zhang Mousheng Xu Jaafar N S Haidar Yong Yu Yijun Ruan Vishwanath R Iyer Roland D Green Claes Wadelius Peggy J Farnham Bing Ren Rachel A Harte Angie S Hinrichs Heather Trumbower Hiram Clawson Jennifer Hillman-Jackson Ann S Zweig Kayla Smith Archana Thakkapallayil Galt Barber Robert M Kuhn Donna Karolchik Lluis Armengol Christine P Bird Paul I W de Bakker Andrew D Kern Nuria Lopez-Bigas Joel D Martin Barbara E Stranger Abigail Woodroffe Eugene Davydov Antigone Dimas Eduardo Eyras Ingileif B Hallgrímsdóttir Julian Huppert Michael C Zody Gonçalo R Abecasis Xavier Estivill Gerard G Bouffard Xiaobin Guan Nancy F Hansen Jacquelyn R Idol Valerie V B Maduro Baishali Maskeri Jennifer C McDowell Morgan Park Pamela J Thomas Alice C Young Robert W Blakesley Donna M Muzny Erica Sodergren David A Wheeler Kim C Worley Huaiyang Jiang George M Weinstock Richard A Gibbs Tina Graves Robert Fulton Elaine R Mardis Richard K Wilson Michele Clamp James Cuff Sante Gnerre David B Jaffe Jean L Chang Kerstin Lindblad-Toh Eric S Lander Maxim Koriabine Mikhail Nefedov Kazutoyo Osoegawa Yuko Yoshinaga Baoli Zhu Pieter J de Jong
June 2007

The transcriptional repressor REST is a critical regulator of the neurosecretory phenotype.

J Neurochem 2006 Sep;98(6):1828-40

Institute of Membrane and Systems Biology, Faculty of Biological Sciences, University of Leeds, Leeds, UK.

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http://dx.doi.org/10.1111/j.1471-4159.2006.04010.xDOI Listing
September 2006

Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes.

Proc Natl Acad Sci U S A 2004 Jul 6;101(28):10458-63. Epub 2004 Jul 6.

Schools of Biochemistry and Microbiology and Biomedical Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom.

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http://dx.doi.org/10.1073/pnas.0401827101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC478591PMC
July 2004

Interaction of the repressor element 1-silencing transcription factor (REST) with target genes.

J Mol Biol 2003 Dec;334(5):863-74

School of Biochemistry and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.

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http://dx.doi.org/10.1016/j.jmb.2003.10.017DOI Listing
December 2003

Distinct RE-1 silencing transcription factor-containing complexes interact with different target genes.

J Biol Chem 2004 Jan 15;279(1):556-61. Epub 2003 Oct 15.

School of Biochemistry and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.

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http://dx.doi.org/10.1074/jbc.M310353200DOI Listing
January 2004