Alexander Platt

Alexander Platt

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Alexander Platt

Alexander Platt

Publications by authors named "Alexander Platt"

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21Publications

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An estimator of first coalescent time reveals selection on young variants and large heterogeneity in rare allele ages among human populations.

PLoS Genet 2019 Aug 19;15(8):e1008340. Epub 2019 Aug 19.

Center for Computational Genetics and Genomics, Dept. Biology, Temple University, Philadelphia, Pennsylvania, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1008340DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6715256PMC
August 2019

OCMA: Fast, Memory-Efficient Factorization of Prohibitively Large Relationship Matrices.

G3 (Bethesda) 2019 01 9;9(1):13-19. Epub 2019 Jan 9.

Department of Biochemistry and Molecular Biology, University of Calgary, Canada

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http://dx.doi.org/10.1534/g3.118.200908DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6325911PMC
January 2019

Adaptive Landscape of Protein Variation in Human Exomes.

Mol Biol Evol 2018 08;35(8):2015-2025

Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA.

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http://dx.doi.org/10.1093/molbev/msy107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6063297PMC
August 2018

Protein evolution depends on multiple distinct population size parameters.

BMC Evol Biol 2018 02 8;18(1):17. Epub 2018 Feb 8.

Department of Biology and Center for Computational Genetics and Genomics, Temple University, Philadelphia, 19121, USA.

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http://dx.doi.org/10.1186/s12862-017-1085-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5806465PMC
February 2018

Low-dose ranibizumab as primary treatment of posterior type I retinopathy of prematurity.

Can J Ophthalmol 2017 Oct 19;52(5):468-474. Epub 2017 Jul 19.

Calgary Retina Consultants, Calgary, Alberta, Canada.

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http://dx.doi.org/10.1016/j.jcjo.2017.02.012DOI Listing
October 2017

Metallic intraocular foreign body as detected by magnetic resonance imaging without complications- A case report.

Am J Ophthalmol Case Rep 2017 Sep 22;7:76-79. Epub 2017 Jun 22.

Calgary Retina Consultants, #200, 5340 1st Street S.W., Calgary, Alberta, Canada.

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http://dx.doi.org/10.1016/j.ajoc.2017.06.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5722138PMC
September 2017

Genome-wide signature of local adaptation linked to variable CpG methylation in oak populations.

Mol Ecol 2015 Aug 5;24(15):3823-30. Epub 2015 Jun 5.

Ecology and Evolutionary Biology, University of California, 610 Charles E. Young Dr. E., Los Angeles, CA, 90095, USA.

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http://dx.doi.org/10.1111/mec.13230DOI Listing
August 2015

Coselected genes determine adaptive variation in herbivore resistance throughout the native range of Arabidopsis thaliana.

Proc Natl Acad Sci U S A 2015 Mar 16;112(13):4032-7. Epub 2015 Mar 16.

Department of Ecology and Evolution, University of Chicago, Chicago, IL 60637;

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http://dx.doi.org/10.1073/pnas.1421416112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4386350PMC
March 2015

Spatial localization of recent ancestors for admixed individuals.

G3 (Bethesda) 2014 Nov 3;4(12):2505-18. Epub 2014 Nov 3.

Interdepartmental Program in Bioinformatics, University of California, Los Angeles, California 90095 Department of Human Genetics, University of California, Los Angeles, California 90095 Department of Pathology and Laboratory Medicine, Geffen School of Medicine at University of California, Los Angeles, California 90095

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http://dx.doi.org/10.1534/g3.114.014274DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4267945PMC
November 2014

Pleiotropy of FRIGIDA enhances the potential for multivariate adaptation.

Proc Biol Sci 2013 Jul 22;280(1763):20131043. Epub 2013 May 22.

Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO, USA.

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http://dx.doi.org/10.1098/rspb.2013.1043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774242PMC
July 2013

A new era of human population genetics.

Genome Biol 2012 Dec 26;13(12):182. Epub 2012 Dec 26.

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http://dx.doi.org/10.1186/gb-2012-13-12-182DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3580407PMC
December 2012

Source verification of mis-identified Arabidopsis thaliana accessions.

Plant J 2011 Aug 16;67(3):554-66. Epub 2011 Jun 16.

Ecology and Evolution, University of Chicago, Chicago, IL 60637, USA.

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http://doi.wiley.com/10.1111/j.1365-313X.2011.04606.x
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http://dx.doi.org/10.1111/j.1365-313X.2011.04606.xDOI Listing
August 2011

Conditions under which genome-wide association studies will be positively misleading.

Genetics 2010 Nov 2;186(3):1045-52. Epub 2010 Sep 2.

Molecular and Computational Biology, University of Southern California, Los Angeles, California 90089, USA.

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http://www.genetics.org/cgi/doi/10.1534/genetics.110.121665
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http://dx.doi.org/10.1534/genetics.110.121665DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2975277PMC
November 2010

Association mapping through heuristic evolutionary history reconstruction-application to GAW15 Problem 3.

Authors:
Alexander Platt

BMC Proc 2007 18;1 Suppl 1:S131. Epub 2007 Dec 18.

Department of Molecular and Computational Biology, University of Southern California, 1050 Childs Way, Los Angeles, California 90089-2910, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2367498PMC
http://dx.doi.org/10.1186/1753-6561-1-s1-s131DOI Listing
December 2009

Summary of contributions to GAW15 Group 13: candidate gene association studies.

Genet Epidemiol 2007 ;31 Suppl 1:S110-7

Division of Biostatistics, Department of Health Science Research, Mayo Clinic College of Medicine, 200 First Street SW, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1002/gepi.20287DOI Listing
April 2008