Alexander Gusev

Alexander Gusev

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Alexander Gusev

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Effect of GO on bacterial cells: Role of the medium type and electrostatic interactions.

Mater Sci Eng C Mater Biol Appl 2019 Jun 22;99:275-281. Epub 2019 Jan 22.

National University of Science and Technology MISIS, 4, Lenin avenue, Moscow 119991, Russia.

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http://dx.doi.org/10.1016/j.msec.2019.01.093DOI Listing
June 2019

Probabilistic fine-mapping of transcriptome-wide association studies.

Nat Genet 2019 04 29;51(4):675-682. Epub 2019 Mar 29.

Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.

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http://dx.doi.org/10.1038/s41588-019-0367-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6619422PMC
April 2019

An evolutionary compass for detecting signals of polygenic selection and mutational bias.

Evol Lett 2019 Feb 25;3(1):69-79. Epub 2019 Jan 25.

Department of Medicine University of California San Francisco CA.

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http://dx.doi.org/10.1002/evl3.97DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369964PMC
February 2019

Author Correction: Large-scale transcriptome-wide association study identifies new prostate cancer risk regions.

Nat Commun 2019 01 8;10(1):171. Epub 2019 Jan 8.

Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, 90095, CA, USA.

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http://www.nature.com/articles/s41467-018-08108-7
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http://dx.doi.org/10.1038/s41467-018-08108-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6325152PMC
January 2019

Medieval mummies of Zeleny Yar burial ground in the Arctic Zone of Western Siberia.

PLoS One 2019 25;14(1):e0210718. Epub 2019 Jan 25.

Lab of Bioanthropology, Paleopathology, and History of Diseases, Department of Anatomy/Institute of Forensic Science, Seoul National University College of Medicine, Seoul, South Korea.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0210718PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6347368PMC
January 2019

Large-scale transcriptome-wide association study identifies new prostate cancer risk regions.

Nat Commun 2018 10 4;9(1):4079. Epub 2018 Oct 4.

Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, 90095, CA, USA.

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http://www.nature.com/articles/s41467-018-06302-1
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http://dx.doi.org/10.1038/s41467-018-06302-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6172280PMC
October 2018

Transcriptome-wide association studies accounting for colocalization using Egger regression.

Genet Epidemiol 2018 07 29;42(5):418-433. Epub 2018 May 29.

Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts.

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http://dx.doi.org/10.1002/gepi.22131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342197PMC
July 2018

A transcriptome-wide association study of 229,000 women identifies new candidate susceptibility genes for breast cancer.

Authors:
Lang Wu Wei Shi Jirong Long Xingyi Guo Kyriaki Michailidou Jonathan Beesley Manjeet K Bolla Xiao-Ou Shu Yingchang Lu Qiuyin Cai Fares Al-Ejeh Esdy Rozali Qin Wang Joe Dennis Bingshan Li Chenjie Zeng Helian Feng Alexander Gusev Richard T Barfield Irene L Andrulis Hoda Anton-Culver Volker Arndt Kristan J Aronson Paul L Auer Myrto Barrdahl Caroline Baynes Matthias W Beckmann Javier Benitez Marina Bermisheva Carl Blomqvist Natalia V Bogdanova Stig E Bojesen Hiltrud Brauch Hermann Brenner Louise Brinton Per Broberg Sara Y Brucker Barbara Burwinkel Trinidad Caldés Federico Canzian Brian D Carter J Esteban Castelao Jenny Chang-Claude Xiaoqing Chen Ting-Yuan David Cheng Hans Christiansen Christine L Clarke Margriet Collée Sten Cornelissen Fergus J Couch David Cox Angela Cox Simon S Cross Julie M Cunningham Kamila Czene Mary B Daly Peter Devilee Kimberly F Doheny Thilo Dörk Isabel Dos-Santos-Silva Martine Dumont Miriam Dwek Diana M Eccles Ursula Eilber A Heather Eliassen Christoph Engel Mikael Eriksson Laura Fachal Peter A Fasching Jonine Figueroa Dieter Flesch-Janys Olivia Fletcher Henrik Flyger Lin Fritschi Marike Gabrielson Manuela Gago-Dominguez Susan M Gapstur Montserrat García-Closas Mia M Gaudet Maya Ghoussaini Graham G Giles Mark S Goldberg David E Goldgar Anna González-Neira Pascal Guénel Eric Hahnen Christopher A Haiman Niclas Håkansson Per Hall Emily Hallberg Ute Hamann Patricia Harrington Alexander Hein Belynda Hicks Peter Hillemanns Antoinette Hollestelle Robert N Hoover John L Hopper Guanmengqian Huang Keith Humphreys David J Hunter Anna Jakubowska Wolfgang Janni Esther M John Nichola Johnson Kristine Jones Michael E Jones Audrey Jung Rudolf Kaaks Michael J Kerin Elza Khusnutdinova Veli-Matti Kosma Vessela N Kristensen Diether Lambrechts Loic Le Marchand Jingmei Li Sara Lindström Jolanta Lissowska Wing-Yee Lo Sibylle Loibl Jan Lubinski Craig Luccarini Michael P Lux Robert J MacInnis Tom Maishman Ivana Maleva Kostovska Arto Mannermaa JoAnn E Manson Sara Margolin Dimitrios Mavroudis Hanne Meijers-Heijboer Alfons Meindl Usha Menon Jeffery Meyer Anna Marie Mulligan Susan L Neuhausen Heli Nevanlinna Patrick Neven Sune F Nielsen Børge G Nordestgaard Olufunmilayo I Olopade Janet E Olson Håkan Olsson Paolo Peterlongo Julian Peto Dijana Plaseska-Karanfilska Ross Prentice Nadege Presneau Katri Pylkäs Brigitte Rack Paolo Radice Nazneen Rahman Gad Rennert Hedy S Rennert Valerie Rhenius Atocha Romero Jane Romm Anja Rudolph Emmanouil Saloustros Dale P Sandler Elinor J Sawyer Marjanka K Schmidt Rita K Schmutzler Andreas Schneeweiss Rodney J Scott Christopher G Scott Sheila Seal Mitul Shah Martha J Shrubsole Ann Smeets Melissa C Southey John J Spinelli Jennifer Stone Harald Surowy Anthony J Swerdlow Rulla M Tamimi William Tapper Jack A Taylor Mary Beth Terry Daniel C Tessier Abigail Thomas Kathrin Thöne Rob A E M Tollenaar Diana Torres Thérèse Truong Michael Untch Celine Vachon David Van Den Berg Daniel Vincent Quinten Waisfisz Clarice R Weinberg Camilla Wendt Alice S Whittemore Hans Wildiers Walter C Willett Robert Winqvist Alicja Wolk Lucy Xia Xiaohong R Yang Argyrios Ziogas Elad Ziv Alison M Dunning Paul D P Pharoah Jacques Simard Roger L Milne Stacey L Edwards Peter Kraft Douglas F Easton Georgia Chenevix-Trench Wei Zheng

Nat Genet 2018 07 18;50(7):968-978. Epub 2018 Jun 18.

Division of Epidemiology, Department of Medicine, Vanderbilt Epidemiology Center, Vanderbilt-Ingram Cancer Center, Vanderbilt University School of Medicine, Nashville, TN, USA.

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http://dx.doi.org/10.1038/s41588-018-0132-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6314198PMC
July 2018

Methods for fine-mapping with chromatin and expression data.

PLoS Genet 2018 02 26;14(2):e1007240. Epub 2018 Feb 26.

Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, California, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1007240DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5843356PMC
February 2018

Functional Architectures of Local and Distal Regulation of Gene Expression in Multiple Human Tissues.

Am J Hum Genet 2017 Apr 23;100(4):605-616. Epub 2017 Mar 23.

Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA; Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2017.03.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5384099PMC
April 2017

The effect of Intravenous Immunoglobulin (IVIG) on \textit{ex vivo} activation of human leukocytes.

Hum Antibodies 2016 ;24(3-4):39-44

Zabludowicz Center for Autoimmune Diseases, Sheba Medical Center, Sackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel.

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http://dx.doi.org/10.3233/HAB-160293DOI Listing
March 2017

Integrating Gene Expression with Summary Association Statistics to Identify Genes Associated with 30 Complex Traits.

Am J Hum Genet 2017 Mar 23;100(3):473-487. Epub 2017 Feb 23.

Department of Pathology & Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90024, USA; Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA 90024, USA; Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90024, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2017.01.031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5339290PMC
March 2017

Genetic Mechanisms Leading to Sex Differences Across Common Diseases and Anthropometric Traits.

Genetics 2017 02 14;205(2):979-992. Epub 2016 Dec 14.

Department of Psychiatry and Institute for Human Genetics, University of California, San Francisco, California 94143

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http://www.genetics.org/content/early/2016/12/12/genetics.11
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http://dx.doi.org/10.1534/genetics.116.193623DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5289864PMC
February 2017

Nanosized zero-valent iron as Fenton-like reagent for ultrasonic-assisted leaching of zinc from blast furnace sludge.

J Hazard Mater 2017 Jan 22;321:557-565. Epub 2016 Sep 22.

National University of Science and Technology "MISiS", 4 Leninskiy prospekt, Moscow, 119049, Russia.

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http://dx.doi.org/10.1016/j.jhazmat.2016.09.046DOI Listing
January 2017

Mixed Model Association with Family-Biased Case-Control Ascertainment.

Am J Hum Genet 2017 Jan 22;100(1):31-39. Epub 2016 Dec 22.

Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2016.11.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5223022PMC
January 2017

extract mediated biosynthesis of AgO NPs with excellent antioxidant and antibacterial potential for biomedical application.

IET Nanobiotechnol 2016 Dec;10(6):425-430

Department of Functional Nanosystems and High-Temperature Materials, National University of Science and Technology 'MISiS', Leninskiy Pr. 4, Moscow 119049, Russia.

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http://dx.doi.org/10.1049/iet-nbt.2015.0097DOI Listing
December 2016

A Frameshift in CSF2RB Predominant Among Ashkenazi Jews Increases Risk for Crohn's Disease and Reduces Monocyte Signaling via GM-CSF.

Gastroenterology 2016 10 1;151(4):710-723.e2. Epub 2016 Jul 1.

Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York; Division of Gastroenterology, Icahn School of Medicine at Mount Sinai, New York, New York; The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, New York. Electronic address:

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http://dx.doi.org/10.1053/j.gastro.2016.06.045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5037012PMC
October 2016

Versatile synthesis of PHMB-stabilized silver nanoparticles and their significant stimulating effect on fodder beet (Beta vulgaris L.).

Mater Sci Eng C Mater Biol Appl 2016 May 21;62:152-9. Epub 2016 Jan 21.

M.V. Lomonosov Moscow State University, Department of Chemistry, 1-3 Lenin Hills, Moscow 119991, Russia; Grand Harvest Research International Development Limited, 7 Ronda Doctor Turró, 9-B, Mataró, Barcelona 08303, Spain; National Research Centre "Kurchatov Institute", 1, Academician Kurchatov Square, Moscow 123182, Russia. Electronic address:

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http://dx.doi.org/10.1016/j.msec.2016.01.040DOI Listing
May 2016

Atlas of prostate cancer heritability in European and African-American men pinpoints tissue-specific regulation.

Authors:
Alexander Gusev Huwenbo Shi Gleb Kichaev Mark Pomerantz Fugen Li Henry W Long Sue A Ingles Rick A Kittles Sara S Strom Benjamin A Rybicki Barbara Nemesure William B Isaacs Wei Zheng Curtis A Pettaway Edward D Yeboah Yao Tettey Richard B Biritwum Andrew A Adjei Evelyn Tay Ann Truelove Shelley Niwa Anand P Chokkalingam Esther M John Adam B Murphy Lisa B Signorello John Carpten M Cristina Leske Suh-Yuh Wu Anslem J M Hennis Christine Neslund-Dudas Ann W Hsing Lisa Chu Phyllis J Goodman Eric A Klein John S Witte Graham Casey Sam Kaggwa Michael B Cook Daniel O Stram William J Blot Rosalind A Eeles Douglas Easton Zsofia Kote-Jarai Ali Amin Al Olama Sara Benlloch Kenneth Muir Graham G Giles Melissa C Southey Liesel M Fitzgerald Henrik Gronberg Fredrik Wiklund Markus Aly Brian E Henderson Johanna Schleutker Tiina Wahlfors Teuvo L J Tammela Børge G Nordestgaard Tim J Key Ruth C Travis David E Neal Jenny L Donovan Freddie C Hamdy Paul Pharoah Nora Pashayan Kay-Tee Khaw Janet L Stanford Stephen N Thibodeau Shannon K McDonnell Daniel J Schaid Christiane Maier Walther Vogel Manuel Luedeke Kathleen Herkommer Adam S Kibel Cezary Cybulski Dominika Wokolorczyk Wojciech Kluzniak Lisa Cannon-Albright Craig Teerlink Hermann Brenner Aida K Dieffenbach Volker Arndt Jong Y Park Thomas A Sellers Hui-Yi Lin Chavdar Slavov Radka Kaneva Vanio Mitev Jyotsna Batra Amanda Spurdle Judith A Clements Manuel R Teixeira Hardev Pandha Agnieszka Michael Paula Paulo Sofia Maia Andrzej Kierzek David V Conti Demetrius Albanes Christine Berg Sonja I Berndt Daniele Campa E David Crawford W Ryan Diver Susan M Gapstur J Michael Gaziano Edward Giovannucci Robert Hoover David J Hunter Mattias Johansson Peter Kraft Loic Le Marchand Sara Lindström Carmen Navarro Kim Overvad Elio Riboli Afshan Siddiq Victoria L Stevens Dimitrios Trichopoulos Paolo Vineis Meredith Yeager Gosia Trynka Soumya Raychaudhuri Frederick R Schumacher Alkes L Price Matthew L Freedman Christopher A Haiman Bogdan Pasaniuc

Nat Commun 2016 Apr 7;7:10979. Epub 2016 Apr 7.

Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, California 90095, USA.

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http://dx.doi.org/10.1038/ncomms10979DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829663PMC
April 2016

The evolving interaction of low-frequency earthquakes during transient slip.

Sci Adv 2016 Apr 22;2(4):e1501616. Epub 2016 Apr 22.

Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Institut des Sciences de la Terre (ISTerre), Université Grenoble Alpes, CNRS, IRD, 38610 Gières, France.

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http://dx.doi.org/10.1126/sciadv.1501616DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4846440PMC
April 2016

Leveraging Distant Relatedness to Quantify Human Mutation and Gene-Conversion Rates.

Am J Hum Genet 2015 Dec 12;97(6):775-89. Epub 2015 Nov 12.

Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.

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http://dx.doi.org/10.1016/j.ajhg.2015.10.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4678427PMC
December 2015

Opisthorchiasis in infant remains from the medieval Zeleniy Yar burial ground of XII-XIII centuries AD.

Mem Inst Oswaldo Cruz 2015 Dec 24;110(8):974-80. Epub 2015 Nov 24.

Scientific and Production Center, Center for Protection and Use of Monuments of History and Culture of Sverdlovsk Region, Institution of Culture of Sverdlovsk Region, Ekaterinburg, Urais, Russia.

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http://dx.doi.org/10.1590/0074-02760150156DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4708016PMC
December 2015

An atlas of genetic correlations across human diseases and traits.

Nat Genet 2015 Nov 28;47(11):1236-41. Epub 2015 Sep 28.

Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1038/ng.3406DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4797329PMC
November 2015

New data and an old puzzle: the negative association between schizophrenia and rheumatoid arthritis.

Authors:
S Hong Lee Enda M Byrne Christina M Hultman Anna Kähler Anna A E Vinkhuyzen Stephan Ripke Ole A Andreassen Thomas Frisell Alexander Gusev Xinli Hu Robert Karlsson Vasilis X Mantzioris John J McGrath Divya Mehta Eli A Stahl Qiongyi Zhao Kenneth S Kendler Patrick F Sullivan Alkes L Price Michael O'Donovan Yukinori Okada Bryan J Mowry Soumya Raychaudhuri Naomi R Wray William Byerley Wiepke Cahn Rita M Cantor Sven Cichon Paul Cormican David Curtis Srdjan Djurovic Valentina Escott-Price Pablo V Gejman Lyudmila Georgieva Ina Giegling Thomas F Hansen Andrés Ingason Yunjung Kim Bettina Konte Phil H Lee Andrew McIntosh Andrew McQuillin Derek W Morris Markus M Nöthen Colm O'Dushlaine Ann Olincy Line Olsen Carlos N Pato Michele T Pato Benjamin S Pickard Danielle Posthuma Henrik B Rasmussen Marcella Rietschel Dan Rujescu Thomas G Schulze Jeremy M Silverman Srinivasa Thirumalai Thomas Werge Ingrid Agartz Farooq Amin Maria H Azevedo Nicholas Bass Donald W Black Douglas H R Blackwood Richard Bruggeman Nancy G Buccola Khalid Choudhury Robert C Cloninger Aiden Corvin Nicholas Craddock Mark J Daly Susmita Datta Gary J Donohoe Jubao Duan Frank Dudbridge Ayman Fanous Robert Freedman Nelson B Freimer Marion Friedl Michael Gill Hugh Gurling Lieuwe De Haan Marian L Hamshere Annette M Hartmann Peter A Holmans René S Kahn Matthew C Keller Elaine Kenny George K Kirov Lydia Krabbendam Robert Krasucki Jacob Lawrence Todd Lencz Douglas F Levinson Jeffrey A Lieberman Dan-Yu Lin Don H Linszen Patrik K E Magnusson Wolfgang Maier Anil K Malhotra Manuel Mattheisen Morten Mattingsdal Steven A McCarroll Helena Medeiros Ingrid Melle Vihra Milanova Inez Myin-Germeys Benjamin M Neale Roel A Ophoff Michael J Owen Jonathan Pimm Shaun M Purcell Vinay Puri Digby J Quested Lizzy Rossin Douglas Ruderfer Alan R Sanders Jianxin Shi Pamela Sklar David St Clair T Scott Stroup Jim Van Os Peter M Visscher Durk Wiersma Stanley Zammit S Louis Bridges Hyon K Choi Marieke J H Coenen Niek de Vries Philippe Dieud Jeffrey D Greenberg Tom W J Huizinga Leonid Padyukov Katherine A Siminovitch Paul P Tak Jane Worthington Philip L De Jager Joshua C Denny Peter K Gregersen Lars Klareskog Xavier Mariette Robert M Plenge Mart van Laar Piet van Riel

Int J Epidemiol 2015 Oct;44(5):1706-21

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http://dx.doi.org/10.1093/ije/dyv136DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4881824PMC
October 2015

Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores.

Am J Hum Genet 2015 Oct;97(4):576-92

Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; Program in Genetic Epidemiology and Statistical Genetics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA. Electronic address:

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http://biorxiv.org/content/biorxiv/early/2015/03/01/015859.f
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http://linkinghub.elsevier.com/retrieve/pii/S000292971500365
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http://dx.doi.org/10.1016/j.ajhg.2015.09.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4596916PMC
October 2015

Leveraging local ancestry to detect gene-gene interactions in genome-wide data.

BMC Genet 2015 Oct 24;16:124. Epub 2015 Oct 24.

Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, CA, USA.

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http://dx.doi.org/10.1186/s12863-015-0283-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4619349PMC
October 2015

Mixed model with correction for case-control ascertainment increases association power.

Am J Hum Genet 2015 May 16;96(5):720-30. Epub 2015 Apr 16.

Department of Biostatistics, Harvard T.H. Chan School of Public Health, Harvard University, Boston, MA 02115, USA; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Harvard University, Boston, MA 02115, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2015.03.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4570278PMC
May 2015

Fast and accurate imputation of summary statistics enhances evidence of functional enrichment.

Bioinformatics 2014 Oct 1;30(20):2906-14. Epub 2014 Jul 1.

Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, 90024, Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, 90024, Department of Medicine, Lung Biology Center, University of California San Francisco, San Francisco, 94143, Program in Genetic Epidemiology and Statistical Genetics, Harvard School of Public Health, Boston, 02115, Departments of Epidemiology and Biostatistics, Harvard School of Public Health, Boston, MA, 02115, Program in Medical and Population Genetics, Broad Institute, Cambridge, MA, 02142, Department of Genetics Harvard Medical School, Boston, MA, 02115 and Division of Population Health Sciences and Education, St George's, University of London, UK Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, 90024, Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, 90024, Department of Medicine, Lung Biology Center, University of California San Francisco, San Francisco, 94143, Program in Genetic Epidemiology and Statistical Genetics, Harvard School of Public Health, Boston, 02115, Departments of Epidemiology and Biostatistics, Harvard School of Public Health, Boston, MA, 02115, Program in Medical and Population Genetics, Broad Institute, Cambridge, MA, 02142, Department of Genetics Harvard Medical School, Boston, MA, 02115 and Division of Population Health Sciences and Education, St George's, University of London, UK Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, 90024, Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, 90024, Department of Medicine, Lung Biology Center, University of California San Francisco, San Francisco, 94143, Program in Genetic Epidemiology and Statistical Genetics, Har

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http://dx.doi.org/10.1093/bioinformatics/btu416DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184260PMC
October 2014

Quantifying missing heritability at known GWAS loci.

PLoS Genet 2013 26;9(12):e1003993. Epub 2013 Dec 26.

Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, United States of America ; Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts, United States of America ; Medical and Population Genetics Program, Broad Institute, Cambridge, Massachusetts, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1003993DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3873246PMC
August 2014

Detecting identity by descent and homozygosity mapping in whole-exome sequencing data.

PLoS One 2012 11;7(10):e47618. Epub 2012 Oct 11.

Department of Computer Science, Columbia University, New York, NY, USA.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0047618PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3469503PMC
February 2013

Responsiveness to nicotine of neurons of the caudal nucleus of the solitary tract correlates with the neuronal projection target.

J Neurophysiol 2012 Oct 18;108(7):1884-94. Epub 2012 Jul 18.

Department of Pharmacology, Southern Illinois University School of Medicine, Springfield, Illinois, USA.

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http://www.physiology.org/doi/10.1152/jn.00296.2012
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http://dx.doi.org/10.1152/jn.00296.2012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3544998PMC
October 2012

The architecture of long-range haplotypes shared within and across populations.

Mol Biol Evol 2012 Feb 6;29(2):473-86. Epub 2011 Oct 6.

Department of Computer Science, Columbia University, New York, New York, USA.

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http://dx.doi.org/10.1093/molbev/msr133DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3350316PMC
February 2012

Mechanisms of facilitation of synaptic glutamate release by nicotinic agonists in the nucleus of the solitary tract.

Am J Physiol Cell Physiol 2011 Aug 25;301(2):C347-61. Epub 2011 May 25.

Department of Pharmacology, Southern Illinois University School of Medicine, Springfield, IL 62702, USA.

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http://dx.doi.org/10.1152/ajpcell.00473.2010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3154558PMC
August 2011

HLA type inference via haplotypes identical by descent.

J Comput Biol 2011 Mar;18(3):483-93

Computational Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.

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http://dx.doi.org/10.1089/cmb.2010.0258DOI Listing
March 2011

Activation of functional α7-containing nAChRs in hippocampal CA1 pyramidal neurons by physiological levels of choline in the presence of PNU-120596.

PLoS One 2010 Nov 12;5(11):e13964. Epub 2010 Nov 12.

Department of Pharmacology, Southern Illinois University School of Medicine, Springfield, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0013964PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2980465PMC
November 2010

Physiological concentrations of choline activate native alpha7-containing nicotinic acetylcholine receptors in the presence of PNU-120596 [1-(5-chloro-2,4-dimethoxyphenyl)-3-(5-methylisoxazol-3-yl)-urea].

J Pharmacol Exp Ther 2010 Feb 18;332(2):588-98. Epub 2009 Nov 18.

Department of Pharmacology, Southern Illinois University School of Medicine, Springfield, IL 62794, USA.

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http://dx.doi.org/10.1124/jpet.109.162099DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2812114PMC
February 2010

Whole population, genome-wide mapping of hidden relatedness.

Genome Res 2009 Feb 29;19(2):318-26. Epub 2008 Oct 29.

Department of Computer Science, Columbia University, New York, New York 10027, USA.

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http://dx.doi.org/10.1101/gr.081398.108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2652213PMC
February 2009

Spike timing and synaptic dynamics at the awake thalamocortical synapse.

Prog Brain Res 2005 ;149:91-105

Department of Psychology, The University of Connecticut, Storrs, CT 06269, USA.

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http://dx.doi.org/10.1016/S0079-6123(05)49008-1DOI Listing
December 2008

Highly scalable genotype phasing by entropy minimization.

IEEE/ACM Trans Comput Biol Bioinform 2008 Apr-Jun;5(2):252-61

Computer Science Department, Columbia University, New York, NY 10027, USA.

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http://dx.doi.org/10.1109/TCBB.2007.70223DOI Listing
July 2008

Dendritic backpropagation and the state of the awake neocortex.

J Neurosci 2007 Aug;27(35):9392-9

Department of Psychology, University of Connecticut, Storrs, Connecticut 06269, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.2218-07.2007DOI Listing
August 2007

An SVD-based grayscale image quality measure for local and global assessment.

IEEE Trans Image Process 2006 Feb;15(2):422-9

Department of Computer and Information Science, Brooklyn College, City University of New York, Brooklyn, NY 11210, USA.

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February 2006

The impact of a corticotectal impulse on the awake superior colliculus.

J Neurosci 2006 Feb;26(8):2250-9

Department of Psychology, University of Connecticut, Storrs, Connecticut 06269, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.4402-05.2006DOI Listing
February 2006

Activation of a cortical column by a thalamocortical impulse.

J Neurosci 2002 Sep;22(17):7766-73

Department of Psychology, The University of Connecticut, Storrs, Connecticut 06269, USA.

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September 2002