Publications by authors named "Alena Shkumatava"

24Publications

lncRNAs in development and differentiation: from sequence motifs to functional characterization.

Development 2021 Jan 13;148(1). Epub 2021 Jan 13.

Institut Curie, PSL Research University, CNRS UMR3215, INSERM U934, Paris 75005, France

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January 2021

SPOCD1 is an essential executor of piRNA-directed de novo DNA methylation.

Nature 2020 08 16;584(7822):635-639. Epub 2020 Jul 16.

Centre for Regenerative Medicine, Institute for Stem Cell Research, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.

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August 2020

Demarcation of Topologically Associating Domains Is Uncoupled from Enriched CTCF Binding in Developing Zebrafish.

iScience 2020 May 10;23(5):101046. Epub 2020 Apr 10.

Institut Curie PSL Research University, INSERM U934, CNRS UMR 3215 75005, Paris, France. Electronic address:

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May 2020

In-Cell Discovery of RNA-Protein Interactions.

Trends Biochem Sci 2020 Mar 14;45(3):272-273. Epub 2020 Jan 14.

Institut Curie, Paris Sciences et Lettres (PSL) Research University, Institut National de la Santé et de la Recherche Médicale (INSERM) Unité 934, Centre National de la Recherche Scientifique (CNRS) Unité Mixte de Recherche 3215, 75005 Paris, France. Electronic address:

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March 2020

In-cell identification and measurement of RNA-protein interactions.

Nat Commun 2019 11 22;10(1):5317. Epub 2019 Nov 22.

Institut Curie, PSL Research University, CNRS UMR3215, INSERM U934, Paris, 75005, France.

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November 2019

Strategies for genetic inactivation of long noncoding RNAs in zebrafish.

RNA 2019 08 1;25(8):897-904. Epub 2019 May 1.

Institut Curie, PSL Research University, CNRS UMR3215, INSERM U934, 75005 Paris, France.

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August 2019

Comparative analyses of super-enhancers reveal conserved elements in vertebrate genomes.

Genome Res 2017 02 13;27(2):259-268. Epub 2016 Dec 13.

Institut Curie, PSL Research University, INSERM U934, CNRS UMR 3215, F-75005, Paris, France.

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February 2017

LncRNAs in vertebrates: advances and challenges.

Biochimie 2015 Oct 24;117:3-14. Epub 2015 Mar 24.

Institut Curie, 26 Rue d'Ulm, 75248 Paris Cedex 05, France; CNRS UMR3215, 75248 Paris Cedex 05, France; INSERM U934, 75248 Paris Cedex 05, France. Electronic address:

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October 2015

Extensive alternative polyadenylation during zebrafish development.

Genome Res 2012 Oct 21;22(10):2054-66. Epub 2012 Jun 21.

Whitehead Institute for Biomedical Research, Cambridge, Massachusetts 02142, USA.

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October 2012

Coherent but overlapping expression of microRNAs and their targets during vertebrate development.

Genes Dev 2009 Feb;23(4):466-81

Whitehead Institute of Biomedical Research and Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 01142, USA.

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February 2009

Shh directs cell-cycle exit by activating p57Kip2 in the zebrafish retina.

EMBO Rep 2005 Jun;6(6):563-9

EMBL Heidelberg, Meyerhofstrasse 1, 69117 Heidelberg, Germany.

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June 2005

The role of hedgehog signaling in the development of the zebrafish visual system.

Dev Neurosci 2004 ;26(5-6):346-51

EMBL, Developmental Biology Programme, Meyerhofstrasse 1, DE-69117 Heidelberg, Germany.

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July 2005