Aleksandra Shypitsyna

Aleksandra Shypitsyna

UNVERIFIED PROFILE

Are you Aleksandra Shypitsyna?   Register this Author

Register author
Aleksandra Shypitsyna

Aleksandra Shypitsyna

Publications by authors named "Aleksandra Shypitsyna"

Are you Aleksandra Shypitsyna?   Register this Author

7Publications

238Reads

36Profile Views

Substrate properties of zebrafish Rtn4b/Nogo and axon regeneration in the zebrafish optic nerve.

J Comp Neurol 2017 Oct 23;525(14):2991-3009. Epub 2017 Jun 23.

Department of Biology, University of Konstanz, Konstanz, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/cne.24253DOI Listing
October 2017

An expanded evaluation of protein function prediction methods shows an improvement in accuracy.

Authors:
Yuxiang Jiang Tal Ronnen Oron Wyatt T Clark Asma R Bankapur Daniel D'Andrea Rosalba Lepore Christopher S Funk Indika Kahanda Karin M Verspoor Asa Ben-Hur Da Chen Emily Koo Duncan Penfold-Brown Dennis Shasha Noah Youngs Richard Bonneau Alexandra Lin Sayed M E Sahraeian Pier Luigi Martelli Giuseppe Profiti Rita Casadio Renzhi Cao Zhaolong Zhong Jianlin Cheng Adrian Altenhoff Nives Skunca Christophe Dessimoz Tunca Dogan Kai Hakala Suwisa Kaewphan Farrokh Mehryary Tapio Salakoski Filip Ginter Hai Fang Ben Smithers Matt Oates Julian Gough Petri Törönen Patrik Koskinen Liisa Holm Ching-Tai Chen Wen-Lian Hsu Kevin Bryson Domenico Cozzetto Federico Minneci David T Jones Samuel Chapman Dukka Bkc Ishita K Khan Daisuke Kihara Dan Ofer Nadav Rappoport Amos Stern Elena Cibrian-Uhalte Paul Denny Rebecca E Foulger Reija Hieta Duncan Legge Ruth C Lovering Michele Magrane Anna N Melidoni Prudence Mutowo-Meullenet Klemens Pichler Aleksandra Shypitsyna Biao Li Pooya Zakeri Sarah ElShal Léon-Charles Tranchevent Sayoni Das Natalie L Dawson David Lee Jonathan G Lees Ian Sillitoe Prajwal Bhat Tamás Nepusz Alfonso E Romero Rajkumar Sasidharan Haixuan Yang Alberto Paccanaro Jesse Gillis Adriana E Sedeño-Cortés Paul Pavlidis Shou Feng Juan M Cejuela Tatyana Goldberg Tobias Hamp Lothar Richter Asaf Salamov Toni Gabaldon Marina Marcet-Houben Fran Supek Qingtian Gong Wei Ning Yuanpeng Zhou Weidong Tian Marco Falda Paolo Fontana Enrico Lavezzo Stefano Toppo Carlo Ferrari Manuel Giollo Damiano Piovesan Silvio C E Tosatto Angela Del Pozo José M Fernández Paolo Maietta Alfonso Valencia Michael L Tress Alfredo Benso Stefano Di Carlo Gianfranco Politano Alessandro Savino Hafeez Ur Rehman Matteo Re Marco Mesiti Giorgio Valentini Joachim W Bargsten Aalt D J van Dijk Branislava Gemovic Sanja Glisic Vladmir Perovic Veljko Veljkovic Nevena Veljkovic Danillo C Almeida-E-Silva Ricardo Z N Vencio Malvika Sharan Jörg Vogel Lakesh Kansakar Shanshan Zhang Slobodan Vucetic Zheng Wang Michael J E Sternberg Mark N Wass Rachael P Huntley Maria J Martin Claire O'Donovan Peter N Robinson Yves Moreau Anna Tramontano Patricia C Babbitt Steven E Brenner Michal Linial Christine A Orengo Burkhard Rost Casey S Greene Sean D Mooney Iddo Friedberg Predrag Radivojac

Genome Biol 2016 09 7;17(1):184. Epub 2016 Sep 7.

Department of Computer Science and Informatics, Indiana University, Bloomington, IN, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s13059-016-1037-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5015320PMC
September 2016

The GOA database: gene Ontology annotation updates for 2015.

Nucleic Acids Res 2015 Jan 6;43(Database issue):D1057-63. Epub 2014 Nov 6.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

View Article

Download full-text PDF

Source
http://academic.oup.com/nar/article/43/D1/D1057/2437623/The-
Publisher Site
http://dx.doi.org/10.1093/nar/gku1113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383930PMC
January 2015

Origin of Nogo-A by domain shuffling in an early jawed vertebrate.

Mol Biol Evol 2011 Apr 22;28(4):1363-70. Epub 2010 Nov 22.

Department of Biology, University of Konstanz, Konstanz, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/molbev/msq313DOI Listing
April 2011

No Nogo66- and NgR-mediated inhibition of regenerating axons in the zebrafish optic nerve.

J Neurosci 2009 Dec;29(49):15489-98

Developmental Neurobiology, Department of Biology, University of Konstanz, D-78457 Konstanz, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1523/JNEUROSCI.3561-09.2009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6666099PMC
December 2009