Publications by authors named "Aldert Zomer"

91Publications

Tracing the animal sources of surface water contamination with Campylobacter jejuni and Campylobacter coli.

Water Res 2020 Sep 20;187:116421. Epub 2020 Sep 20.

Centre for Infectious Disease Control (CIb), National Institute for Public Health and the Environment (RIVM), Postbus 1, 3720 BA Bilthoven Bilthoven, Utrecht, The Netherlands; Institute for Risk Assessment Sciences (IRAS), Utrecht University, Yalelaan 1, De Uithof, 3584 CL, Utrecht, The Netherlands.

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http://dx.doi.org/10.1016/j.watres.2020.116421DOI Listing
September 2020

After the bite: bacterial transmission from grey seals () to harbour porpoises ().

R Soc Open Sci 2020 May 13;7(5):192079. Epub 2020 May 13.

Faculty of Veterinary Medicine, Department of Infectious Diseases and Immunology, Utrecht University, Utrecht, The Netherlands.

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http://dx.doi.org/10.1098/rsos.192079DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7277243PMC
May 2020

Incompatibility and phylogenetic relationship of I-complex plasmids.

Plasmid 2020 05 28;109:102502. Epub 2020 Mar 28.

Wageningen Bioveterinary Research, Lelystad, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.plasmid.2020.102502DOI Listing
May 2020

Genome-wide association studies of Shigella spp. and Enteroinvasive Escherichia coli isolates demonstrate an absence of genetic markers for prediction of disease severity.

BMC Genomics 2020 Feb 10;21(1):138. Epub 2020 Feb 10.

Infectious Disease Research, Diagnostics and laboratory Surveillance, Centre for Infectious Disease Control, National Institute for Public Health and the Environment, Bilthoven, The Netherlands.

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http://dx.doi.org/10.1186/s12864-020-6555-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7011524PMC
February 2020

Whole-genome sequencing of dog-specific assemblages C and D of from single and pooled cysts indicates host-associated genes.

Microb Genom 2019 12;5(12)

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.

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http://dx.doi.org/10.1099/mgen.0.000302DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6939161PMC
December 2019

Living in Cold Blood: , and in Reptiles.

Front Microbiol 2019 15;10:1086. Epub 2019 May 15.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, Netherlands.

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http://dx.doi.org/10.3389/fmicb.2019.01086DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6530492PMC
May 2019

Draft Genome Sequence of Streptococcus suis S10, a Virulent Strain Used in Experimental Pig Infections.

Microbiol Resour Announc 2019 Jun 6;8(23). Epub 2019 Jun 6.

Host-Microbe Interactomics, Wageningen University & Research, Wageningen, The Netherlands

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http://genomea.asm.org/lookup/doi/10.1128/MRA.00227-19
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http://dx.doi.org/10.1128/MRA.00227-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6554600PMC
June 2019

Phylogenomic Investigation of IncI1-Iγ Plasmids Harboring and in Salmonella enterica and Escherichia coli in Multiple Countries.

Antimicrob Agents Chemother 2019 07 24;63(7). Epub 2019 Jun 24.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands

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http://dx.doi.org/10.1128/AAC.02546-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591584PMC
July 2019

Comparative genomics of phenotypic antimicrobial resistances in methicillin-resistant Staphylococcus pseudintermedius of canine origin.

Vet Microbiol 2018 Nov 22;225:125-131. Epub 2018 Sep 22.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.vetmic.2018.09.013DOI Listing
November 2018

Short-Term Hypoxia Dampens Inflammation in vivo via Enhanced Adenosine Release and Adenosine 2B Receptor Stimulation.

EBioMedicine 2018 Jul 4;33:144-156. Epub 2018 Jul 4.

Department of Intensive Care Medicine, Radboud University Medical Center, Nijmegen, the Netherlands; Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.ebiom.2018.06.021DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6085583PMC
July 2018

Immunomodulation and effects on microbiota after in ovo administration of chicken cathelicidin-2.

PLoS One 2018 5;13(6):e0198188. Epub 2018 Jun 5.

Division of Molecular Host Defence, Department of Infectious Diseases & Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0198188PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988267PMC
January 2019

Campylobacter blaseri sp. nov., isolated from common seals (Phoca vitulina).

Int J Syst Evol Microbiol 2018 May 6;68(5):1787-1794. Epub 2018 Apr 6.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.

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http://dx.doi.org/10.1099/ijsem.0.002742DOI Listing
May 2018

Homologous Recombination between Genetically Divergent Campylobacter fetus Lineages Supports Host-Associated Speciation.

Genome Biol Evol 2018 03;10(3):716-722

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, The Netherlands.

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http://dx.doi.org/10.1093/gbe/evy048DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5830970PMC
March 2018

Adaptation of Bordetella pertussis to the Respiratory Tract.

J Infect Dis 2018 05;217(12):1987-1996

Section Pediatric Infectious Diseases, Laboratory of Medical Immunology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Centre, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1093/infdis/jiy125DOI Listing
May 2018

Streptococcus pneumoniae PspC Subgroup Prevalence in Invasive Disease and Differences in Contribution to Complement Evasion.

Infect Immun 2018 04 22;86(4). Epub 2018 Mar 22.

Section Pediatric Infectious Diseases, Laboratory of Medical Immunology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands

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http://dx.doi.org/10.1128/IAI.00010-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5865030PMC
April 2018

Whole genome-based phylogeny of reptile-associated Helicobacter indicates independent niche adaptation followed by diversification in a poikilothermic host.

Sci Rep 2017 08 21;7(1):8387. Epub 2017 Aug 21.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.

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http://dx.doi.org/10.1038/s41598-017-09091-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566214PMC
August 2017

Prospective observational study in two Dutch hospitals to assess the performance of inflammatory plasma markers to determine disease severity of viral respiratory tract infections in children.

BMJ Open 2017 06 30;7(6):e014596. Epub 2017 Jun 30.

Laboratory of Pediatric Infectious Diseases, Department of Pediatrics, Radboud Center for Infectious Diseases, Radboud university medical center, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1136/bmjopen-2016-014596DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5734420PMC
June 2017

Deciphering the distance to antibiotic resistance for the pneumococcus using genome sequencing data.

Sci Rep 2017 02 16;7:42808. Epub 2017 Feb 16.

Laboratory of Pediatric Infectious Diseases, Radboud Institute for Molecular Life Sciences, Radboud University Medical Centre, Nijmegen 6525 GA, The Netherlands.

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http://dx.doi.org/10.1038/srep42808DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5311915PMC
February 2017

Plasmids of Distinct IncK Lineages Show Compatible Phenotypes.

Antimicrob Agents Chemother 2017 03 23;61(3). Epub 2017 Feb 23.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands

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http://dx.doi.org/10.1128/AAC.01954-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5328535PMC
March 2017

Comparative Genomics of Campylobacter iguaniorum to Unravel Genetic Regions Associated with Reptilian Hosts.

Genome Biol Evol 2016 10 5;8(9):3022-3029. Epub 2016 Oct 5.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands WHO Collaborating Center for Campylobacter/OIE Reference Laboratory for Campylobacteriosis, Utrecht, The Netherlands

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http://dx.doi.org/10.1093/gbe/evw218DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5630845PMC
October 2016

Whole genome sequence analysis indicates recent diversification of mammal-associated Campylobacter fetus and implicates a genetic factor associated with H2S production.

BMC Genomics 2016 09 6;17:713. Epub 2016 Sep 6.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.

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http://dx.doi.org/10.1186/s12864-016-3058-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5013579PMC
September 2016

Comparative Genomics of Campylobacter fetus from Reptiles and Mammals Reveals Divergent Evolution in Host-Associated Lineages.

Genome Biol Evol 2016 07 2;8(6):2006-19. Epub 2016 Jul 2.

Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, the Netherlands WHO Collaborating Center for Campylobacter/OIE Reference Laboratory for Campylobacteriosis, Utrecht, the Netherlands

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http://dx.doi.org/10.1093/gbe/evw146DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4943207PMC
July 2016

Advances and perspectives in computational prediction of microbial gene essentiality.

Brief Funct Genomics 2017 03;16(2):70-79

Radboud Institute for Molecular Life Sciences, Laboratory of Paediatric Infectious Diseases, Radboud University Medical Centre, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1093/bfgp/elv063DOI Listing
March 2017

Highly conserved nucleotide phosphatase essential for membrane lipid homeostasis in Streptococcus pneumoniae.

Mol Microbiol 2016 07 19;101(1):12-26. Epub 2016 Feb 19.

Laboratory of Pediatric Infectious Diseases, Department of Pediatrics, Radboud Institute for Molecular Life Sciences, Radboud university medical center, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1111/mmi.13312DOI Listing
July 2016

The post-vaccine microevolution of invasive Streptococcus pneumoniae.

Sci Rep 2015 Oct 23;5:14952. Epub 2015 Oct 23.

Radboud university medical center, Laboratory of Pediatric Infectious Diseases, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1038/srep14952DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4615977PMC
October 2015

The vaccine potential of Bordetella pertussis biofilm-derived membrane proteins.

Emerg Microbes Infect 2014 Aug 20;3(8):e58. Epub 2014 Aug 20.

Laboratory of Pediatric Infectious Diseases, Department of Pediatrics, Radboud University Medical Center , Nijmegen 6500 HB, The Netherlands ; Laboratory of Medical Immunology, Department of Laboratory Medicine, Radboud University Medical Center , Nijmegen 6500 HB, The Netherlands ; Facultad de Ciencias Exactas, Centro de Investigación y Desarrollo en Fermentaciones Industriales (CINDEFI), CONICET-CCT-La Plata, Universidad Nacional de La Plata , La Plata B1900 ASH, Argentina.

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http://dx.doi.org/10.1038/emi.2014.58DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4150286PMC
August 2014

The adult nasopharyngeal microbiome as a determinant of pneumococcal acquisition.

Microbiome 2014 15;2:44. Epub 2014 Dec 15.

Laboratory of Pediatric Infectious Diseases, Department of Pediatrics, Radboudumc, 6500 HB Nijmegen, The Netherlands ; Crucell - Johnson & Johnson, Leiden, The Netherlands.

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http://dx.doi.org/10.1186/2049-2618-2-44DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4323220PMC
February 2015

From microbial gene essentiality to novel antimicrobial drug targets.

BMC Genomics 2014 Nov 5;15:958. Epub 2014 Nov 5.

Radboud Institute for Molecular Life Sciences, Laboratory of Paediatric Infectious Diseases, Radboud University Medical Centre, Nijmegen 6500 HB, The Netherlands.

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http://dx.doi.org/10.1186/1471-2164-15-958DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4233050PMC
November 2014

Nasopharyngeal gene expression, a novel approach to study the course of respiratory syncytial virus infection.

Eur Respir J 2015 Mar 26;45(3):718-25. Epub 2014 Sep 26.

Laboratory of Pediatric Infectious Diseases, Dept of Pediatrics, Radboud University Medical Center, Nijmegen, The Netherlands Laboratory of Medical Immunology, Dept of Laboratory Medicine, Radboud University Medical Center, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1183/09031936.00085614DOI Listing
March 2015

Proteomics-identified Bvg-activated autotransporters protect against bordetella pertussis in a mouse model.

PLoS One 2014 18;9(8):e105011. Epub 2014 Aug 18.

Laboratory of Pediatric Infectious Diseases, Department of Pediatrics, Radboud University Medical Centre, Nijmegen, The Netherlands; Laboratory of Medical Immunology, Department of Laboratory Medicine, Radboud University Medical Centre, Nijmegen, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0105011PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4136822PMC
April 2015

Lactobacillus reuteri 100-23 modulates urea hydrolysis in the murine stomach.

Appl Environ Microbiol 2014 Oct 25;80(19):6104-13. Epub 2014 Jul 25.

Department of Microbiology and Immunology, University of Otago, Dunedin, New Zealand

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http://dx.doi.org/10.1128/AEM.01876-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4178674PMC
October 2014

Comparative genomics of the Bifidobacterium breve taxon.

BMC Genomics 2014 Mar 1;15:170. Epub 2014 Mar 1.

Alimentary Pharmabiotic Centre and Department of Microbiology, Bioscience Institute, National University of Ireland, Western Road, Cork, Ireland.

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http://dx.doi.org/10.1186/1471-2164-15-170DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4007704PMC
March 2014

Differentially expressed genes in Bordetella pertussis strains belonging to a lineage which recently spread globally.

PLoS One 2014 8;9(1):e84523. Epub 2014 Jan 8.

Department of Pediatrics, Laboratory of Pediatric Infectious Diseases, Radboud University Medical Centre, Nijmegen, The Netherlands ; Nijmegen Institute for Infection, Inflammation and Immunity, Radboud University Medical Centre, Nijmegen, The Netherlands ; Netherlands Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM), Bilthoven, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0084523PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3885589PMC
September 2014

Streptococcus pneumoniae serine protease HtrA, but not SFP or PrtA, is a major virulence factor in pneumonia.

PLoS One 2013 11;8(11):e80062. Epub 2013 Nov 11.

Center for Infection and Immunity Amsterdam (CINIMA), Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands ; Center for Experimental and Molecular Medicine (CEMM), Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0080062PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3823867PMC
August 2014

Natural genetic transformation generates a population of merodiploids in Streptococcus pneumoniae.

PLoS Genet 2013 26;9(9):e1003819. Epub 2013 Sep 26.

Centre National de la Recherche Scientifique, LMGM-UMR5100, Toulouse, France ; Université de Toulouse, UPS, Laboratoire de Microbiologie et Génétique Moléculaires, Toulouse, France.

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http://dx.doi.org/10.1371/journal.pgen.1003819DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784515PMC
March 2014

Lytic infection of Lactococcus lactis by bacteriophages Tuc2009 and c2 triggers alternative transcriptional host responses.

Appl Environ Microbiol 2013 Aug 31;79(16):4786-98. Epub 2013 May 31.

Department of Microbiology, University College Cork, Cork, Ireland.

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http://dx.doi.org/10.1128/AEM.01197-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754728PMC
August 2013

Nontypeable Haemophilus influenzae carbonic anhydrase is important for environmental and intracellular survival.

J Bacteriol 2013 Jun 5;195(12):2737-46. Epub 2013 Apr 5.

Laboratory of Pediatric Infectious Diseases, Radboud University Medical Centre, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1128/JB.01870-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3697255PMC
June 2013

A predictive signature gene set for discriminating active from latent tuberculosis in Warao Amerindian children.

BMC Genomics 2013 Feb 1;14:74. Epub 2013 Feb 1.

Laboratory of Pediatric Infectious Diseases, Radboud University Medical Centre, PO Box 9101 (internal post 224), Nijmegen, 6500 HB, The Netherlands.

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http://dx.doi.org/10.1186/1471-2164-14-74DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3600014PMC
February 2013

Streptococcus pneumoniae folate biosynthesis responds to environmental CO2 levels.

J Bacteriol 2013 Apr 25;195(7):1573-82. Epub 2013 Jan 25.

Laboratory of Pediatric Infectious Diseases, Radboud University Medical Center, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1128/JB.01942-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3624543PMC
April 2013

Influenza-induced inflammation drives pneumococcal otitis media.

Infect Immun 2013 Mar 14;81(3):645-52. Epub 2013 Jan 14.

Department of Microbiology and Immunology, The University of Melbourne, Melbourne, Victoria, Australia.

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http://dx.doi.org/10.1128/IAI.01278-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3584865PMC
March 2013

Genome sequence of Moraxella catarrhalis RH4, an isolate of seroresistant lineage.

J Bacteriol 2012 Dec;194(24):6969

Laboratory of Pediatric Infectious Diseases, Radboud University Medical Centre, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1128/JB.01833-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3510597PMC
December 2012

Genetic requirements for Moraxella catarrhalis growth under iron-limiting conditions.

Mol Microbiol 2013 Jan 19;87(1):14-29. Epub 2012 Nov 19.

Laboratory of Pediatric Infectious Diseases, Radboud University Medical Centre, Nijmegen, the Netherlands.

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http://dx.doi.org/10.1111/mmi.12081DOI Listing
January 2013

ESSENTIALS: software for rapid analysis of high throughput transposon insertion sequencing data.

PLoS One 2012 10;7(8):e43012. Epub 2012 Aug 10.

Laboratory of Pediatric Infectious Diseases, Radboud University Medical Centre, Nijmegen, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0043012PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3416827PMC
March 2013

A bile-inducible membrane protein mediates bifidobacterial bile resistance.

Microb Biotechnol 2012 Jul 1;5(4):523-35. Epub 2012 Feb 1.

Departamento de Microbiología y Bioquímica de Productos Lácteos, Instituto de Productos Lácteos de Asturias, Villaviciosa, Asturias, Spain.

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http://dx.doi.org/10.1111/j.1751-7915.2011.00329.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3815329PMC
July 2012

Identification of iron-regulated genes of Bifidobacterium breve UCC2003 as a basis for controlled gene expression.

Bioeng Bugs 2012 May-Jun;3(3):157-67. Epub 2012 May 1.

Alimentary Pharmabiotic Centre and Department of Microbiology, University College Cork, Cork, Ireland.

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http://dx.doi.org/10.4161/bbug.18985DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3370934PMC
October 2012

Discovering novel bile protection systems in Bifidobacterium breve UCC2003 through functional genomics.

Appl Environ Microbiol 2012 Feb 9;78(4):1123-31. Epub 2011 Dec 9.

Department of Microbiology and Biochemistry of Dairy Products, Instituto de Productos Lácteos de Asturias-CSIC, Villaviciosa, Asturias, Spain.

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http://dx.doi.org/10.1128/AEM.06060-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3273026PMC
February 2012

Intertwinement of stress response regulons in Bifidobacterium breve UCC2003.

Gut Microbes 2010 Mar 11;1(2):100-102. Epub 2010 Feb 11.

Alimentary Pharmabiotic Centre and Department of Microbiology; National University of Ireland; Cork, Ireland.

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http://dx.doi.org/10.4161/gmic.1.2.11477DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3023587PMC
March 2010

Ribose utilization by the human commensal Bifidobacterium breve UCC2003.

Microb Biotechnol 2010 May 15;3(3):311-23. Epub 2009 Oct 15.

Alimentary Pharmabiotic Centre, Department of Microbiology, University College Cork, Western Road, Cork, Ireland.

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http://dx.doi.org/10.1111/j.1751-7915.2009.00152.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3815373PMC
May 2010

Cellodextrin utilization by bifidobacterium breve UCC2003.

Appl Environ Microbiol 2011 Mar 7;77(5):1681-90. Epub 2011 Jan 7.

Room 4.05, Department of Microbiology, University College Cork, Western Road, Cork, Ireland.

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http://dx.doi.org/10.1128/AEM.01786-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3067287PMC
March 2011

An interactive regulatory network controls stress response in Bifidobacterium breve UCC2003.

J Bacteriol 2009 Nov 4;191(22):7039-49. Epub 2009 Sep 4.

Alimentary Pharmabiotic Centre and Department of Microbiology, National University of Ireland, Cork, Ireland.

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http://jb.asm.org/content/early/2009/09/04/JB.00897-09.full.
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http://jb.asm.org/cgi/doi/10.1128/JB.00897-09
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http://dx.doi.org/10.1128/JB.00897-09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2772463PMC
November 2009

Characterization of two novel alpha-glucosidases from Bifidobacterium breve UCC2003.

Appl Environ Microbiol 2009 Feb 29;75(4):1135-43. Epub 2008 Dec 29.

Department of Microbiology, University College Cork, Western Road, Cork, Ireland.

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http://dx.doi.org/10.1128/AEM.02391-08DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2643558PMC
February 2009

Supervised Lowess normalization of comparative genome hybridization data--application to lactococcal strain comparisons.

BMC Bioinformatics 2008 Feb 11;9:93. Epub 2008 Feb 11.

Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands.

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http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
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http://dx.doi.org/10.1186/1471-2105-9-93DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2275246PMC
February 2008

Comparative analyses of prophage-like elements present in two Lactococcus lactis strains.

Appl Environ Microbiol 2007 Dec 12;73(23):7771-80. Epub 2007 Oct 12.

Alimentary Pharmabiotic Centre and Department of Microbiology, Bioscience Institute, National University of Ireland, Western Road, Cork, Ireland.

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http://dx.doi.org/10.1128/AEM.01273-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2168057PMC
December 2007

Cell envelope stress induced by the bacteriocin Lcn972 is sensed by the Lactococcal two-component system CesSR.

Mol Microbiol 2007 Apr;64(2):473-86

Instituto de Productos Lácteos de Asturias, IPLA-CSIC. Apdo. 85. 33300 Villaviciosa-Asturias, Spain.

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http://doi.wiley.com/10.1111/j.1365-2958.2007.05668.x
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http://dx.doi.org/10.1111/j.1365-2958.2007.05668.xDOI Listing
April 2007

Complete genome sequence of the prototype lactic acid bacterium Lactococcus lactis subsp. cremoris MG1363.

J Bacteriol 2007 Apr 16;189(8):3256-70. Epub 2007 Feb 16.

Department of Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands.

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http://dx.doi.org/10.1128/JB.01768-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1855848PMC
April 2007

Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp. cremoris MG1363.

J Bacteriol 2007 Feb 6;189(4):1366-81. Epub 2006 Oct 6.

Department of Molecular Genetics, University of Groningen, Groningen Biomolecular Sciences and Biotechnology Institute, 9750 AA Haren, The Netherlands.

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http://dx.doi.org/10.1128/JB.01013-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1797362PMC
February 2007

Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies.

Nucleic Acids Res 2005 Jul;33(Web Server issue):W560-6

Department of Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, PO Box 14, 9750 AA Haren, The Netherlands.

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http://dx.doi.org/10.1093/nar/gki356DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1160117PMC
July 2005

Comparative and functional genomics of lactococci.

FEMS Microbiol Rev 2005 Aug;29(3):411-33

Department of Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands.

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http://dx.doi.org/10.1016/j.femsre.2005.04.004DOI Listing
August 2005

Projector: automatic contig mapping for gap closure purposes.

Nucleic Acids Res 2003 Nov;31(22):e144

Molecular Genetics, University of Groningen, Groningen Biomolecular Sciences and Biotechnology Institute, PO Box 14, 9750 AA Haren, The Netherlands.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC275581PMC
http://dx.doi.org/10.1093/nar/gng144DOI Listing
November 2003

Cell wall attachment of a widely distributed peptidoglycan binding domain is hindered by cell wall constituents.

J Biol Chem 2003 Jun 8;278(26):23874-81. Epub 2003 Apr 8.

Department of Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands.

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http://dx.doi.org/10.1074/jbc.M211055200DOI Listing
June 2003

Transcriptome analysis and related databases of Lactococcus lactis.

Antonie Van Leeuwenhoek 2002 Aug;82(1-4):113-22

University of Groningen, Groningen Biomolecular Sciences and Biotechnology Institute, PO Box 14, 9750 AA Haren, The Netherlands.

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August 2002