Publications by authors named "Adeeb Rahman"

75Publications

A subset of liver resident natural killer cells is expanded in hepatitis C-infected patients with better liver function.

Sci Rep 2021 Jan 15;11(1):1551. Epub 2021 Jan 15.

Division of Liver Diseases, Icahn School of Medicine at Mount Sinai School, 1425 Madison Ave., Icahn 11-23, New York, NY, 10029, USA.

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January 2021

Mapping Systemic Inflammation and Antibody Responses in Multisystem Inflammatory Syndrome in Children (MIS-C).

Cell 2020 11 14;183(4):982-995.e14. Epub 2020 Sep 14.

Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, NY, NY, USA; Mindich Child Health and Development Institute, Icahn School of Medicine at Mount Sinai, NY, NY, USA; Department of Pediatrics, Icahn School of Medicine at Mount Sinai, NY, NY, USA; Department of Microbiology, Icahn School of Medicine at Mount Sinai, NY, NY, USA. Electronic address:

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November 2020

Evidence of potent humoral immune activity in COVID-19-infected kidney transplant recipients.

Am J Transplant 2020 11 2;20(11):3149-3161. Epub 2020 Oct 2.

Department of Medicine, Translational Transplant Research Center, Icahn School of Medicine at Mount Sinai, New York, New York, USA.

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November 2020

Mass cytometry and type 1 diabetes research in the age of single-cell data science.

Curr Opin Endocrinol Diabetes Obes 2020 08;27(4):231-239

Precision Immunology Institute.

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August 2020

High-Parameter Immune Profiling with CyTOF.

Methods Mol Biol 2020 ;2055:351-368

Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.

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November 2020

Single-Cell Analysis of Crohn's Disease Lesions Identifies a Pathogenic Cellular Module Associated with Resistance to Anti-TNF Therapy.

Cell 2019 09 29;178(6):1493-1508.e20. Epub 2019 Aug 29.

Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Department of Genetics and Genomics Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA. Electronic address:

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September 2019

Dietary Intake Regulates the Circulating Inflammatory Monocyte Pool.

Cell 2019 08;178(5):1102-1114.e17

Department of Oncological Sciences, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, New York, NY 10029, USA; The Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, New York, NY 10029, USA; The Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, 1 Gustave L. Levy Place, New York, NY 10029, USA. Electronic address:

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August 2019

Development of a Comprehensive Antibody Staining Database Using a Standardized Analytics Pipeline.

Front Immunol 2019 11;10:1315. Epub 2019 Jun 11.

Human Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY, United States.

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July 2020

Acquisition, Processing, and Quality Control of Mass Cytometry Data.

Methods Mol Biol 2019 ;1989:13-31

Human Immune Monitoring Center, Icahn School of Medicine at Mt. Sinai, New York, NY, USA.

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March 2020

T-cell exhaustion correlates with improved outcomes in kidney transplant recipients.

Kidney Int 2019 08 27;96(2):436-449. Epub 2019 Feb 27.

Department of Medicine, Division of Nephrology and Translational Transplant Research Center, Recanati Miller Transplant Institute, Icahn School of Medicine at Mount Sinai, New York, New York, USA. Electronic address:

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August 2019

Human Intestinal Allografts Contain Functional Hematopoietic Stem and Progenitor Cells that Are Maintained by a Circulating Pool.

Cell Stem Cell 2019 02 29;24(2):227-239.e8. Epub 2018 Nov 29.

Columbia Center for Translational Immunology, Department of Medicine, Columbia University, New York, NY 10032, USA; Department of Microbiology & Immunology, Columbia University, New York, NY 10032, USA; Department of Surgery, Columbia University, New York, NY 10032, USA. Electronic address:

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February 2019

Macrophage Biology, Classification, and Phenotype in Cardiovascular Disease: JACC Macrophage in CVD Series (Part 1).

J Am Coll Cardiol 2018 10;72(18):2166-2180

The Zena and Michael A. Wiener Cardiovascular Institute, Icahn School of Medicine at Mount Sinai, New York, New York. Electronic address:

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October 2018

Protein Barcodes Enable High-Dimensional Single-Cell CRISPR Screens.

Cell 2018 11 18;175(4):1141-1155.e16. Epub 2018 Oct 18.

Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Diabetes Obesity and Metabolism Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Mindich Child Health and Development Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA. Electronic address:

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November 2018

Macrophages orchestrate breast cancer early dissemination and metastasis.

Nat Commun 2018 01 2;9(1):21. Epub 2018 Jan 2.

Division of Hematology and Oncology, Department of Medicine, Tisch Cancer Institute, Black Family Stem Cell Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.

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January 2018

Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data.

Sci Data 2017 10 10;4:170151. Epub 2017 Oct 10.

Department of Pharmacological Sciences, Mount Sinai Center for Bioinformatics, BD2K-LINCS Data Coordination and Integration Center (DCIC), Icahn School of Medicine at Mount Sinai, New York, New York 10029, USA.

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October 2017

Average Overlap Frequency: A simple metric to evaluate staining quality and community identification in high dimensional mass cytometry experiments.

J Immunol Methods 2018 02 4;453:20-29. Epub 2017 Sep 4.

Human Immune Monitoring Center, Icahn School of Medicine at Mt. Sinai, New York, NY 10029, United States; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mt. Sinai, New York, NY 10029, United States. Electronic address:

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February 2018

Application of phospho-CyTOF to characterize immune activation in patients with sickle cell disease in an ex vivo model of thrombosis.

J Immunol Methods 2018 02 29;453:11-19. Epub 2017 Jul 29.

Department of Medicine, Hematology and Oncology, Icahn School of Medicine at Mount Sinai, 1470 Madison Avenue, New York, NY, USA. Electronic address:

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February 2018

High-dimensional single cell mapping of cerium distribution in the lung immune microenvironment of an active smoker.

Cytometry B Clin Cytom 2018 11 7;94(6):941-945. Epub 2017 Aug 7.

Icahn School of Medicine at Mt. Sinai, The Precision Immunology Institute, New York, 10029.

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November 2018

Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses.

Cell 2017 05;169(4):750-765.e17

Department of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; The Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Human Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA. Electronic address:

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May 2017

Systemic innate immune activation in food protein-induced enterocolitis syndrome.

J Allergy Clin Immunol 2017 Jun 10;139(6):1885-1896.e9. Epub 2017 Feb 10.

Jaffe Food Allergy Institute, New York, NY. Electronic address:

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June 2017

Cell size assays for mass cytometry.

Cytometry A 2017 01 21;91(1):14-24. Epub 2016 Oct 21.

Department of Pharmacology and Systems Therapeutics, Icahn School of Medicine at Mount Sinai, New York, New York, 10029.

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January 2017

Host-Protozoan Interactions Protect from Mucosal Infections through Activation of the Inflammasome.

Cell 2016 Oct;167(2):444-456.e14

Department of Oncological Science, Icahn School of Medicine at Mount Sinai, 1475 Madison Avenue, New York, NY 10028, USA; The Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, 1475 Madison Avenue, New York, NY 10028, USA; The Immunological Institute, Icahn School of Medicine at Mount Sinai, 1475 Madison Avenue, New York, NY 10028, USA. Electronic address:

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October 2016

Medullary thymic epithelial cells and CD8α dendritic cells coordinately regulate central tolerance but CD8α cells are dispensable for thymic regulatory T cell production.

J Autoimmun 2016 Dec 16;75:141-149. Epub 2016 Aug 16.

Department of Medicine/Clinical Immunology, The Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address:

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December 2016

Mass cytometry profiling the response of basophils and the complete peripheral blood compartment to peanut.

J Allergy Clin Immunol 2016 12 13;138(6):1741-1744.e9. Epub 2016 Aug 13.

Department of Pediatrics, Icahn School of Medicine at Mount Sinai, New York, NY; Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY; Mindich Child Health and Development Institute, Icahn School of Medicine at Mount Sinai, New York, NY; Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY. Electronic address:

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December 2016

Expansion and Activation of CD103(+) Dendritic Cell Progenitors at the Tumor Site Enhances Tumor Responses to Therapeutic PD-L1 and BRAF Inhibition.

Immunity 2016 Apr;44(4):924-38

Department of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA. Electronic address:

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April 2016

Heparin reduces nonspecific eosinophil staining artifacts in mass cytometry experiments.

Cytometry A 2016 06 6;89(6):601-7. Epub 2016 Apr 6.

Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York, 10029.

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June 2016

Regulation of macrophage development and function in peripheral tissues.

Nat Rev Immunol 2015 12;15(12):731-44

Department of Oncological Sciences, Tisch Cancer Institute and the Immunology Institute, Icahn School of Medicine at Mount Sinai, New York City, New York 10029, USA.

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December 2015

Expansion of inflammatory innate lymphoid cells in patients with common variable immune deficiency.

J Allergy Clin Immunol 2016 Apr 2;137(4):1206-1215.e6. Epub 2015 Nov 2.

Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY; Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY. Electronic address:

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April 2016

Vitamin D status of human immunodeficiency virus-positive patients with advanced liver disease enrolled in the solid organ transplantation in HIV: multi-site study.

Liver Transpl 2014 Feb 12;20(2):156-64. Epub 2013 Dec 12.

Division of Liver Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY.

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February 2014

Flow cytometric methods for the assessment of allergic disease.

Authors:
Adeeb H Rahman

Methods Mol Biol 2013 ;1032:297-313

Division of Liver Diseases, Mount Sinai School of Medicine, New York, NY, USA.

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March 2014

Dendritic cells and liver fibrosis.

Biochim Biophys Acta 2013 Jul 9;1832(7):998-1004. Epub 2013 Jan 9.

Division of Liver Diseases, Mount Sinai School of Medicine, New York, NY, USA.

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July 2013

Vitamin D for your patients with chronic hepatitis C?

J Hepatol 2013 Jan 4;58(1):184-9. Epub 2012 Aug 4.

Division of Liver Diseases, Mount Sinai School of Medicine, New York, NY 10029, USA.

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January 2013

EGR-2 is not required for in vivo CD4 T cell mediated immune responses.

PLoS One 2010 Sep 23;5(9):e12904. Epub 2010 Sep 23.

Department of Medicine, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania, United States of America.

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September 2010

The contribution of direct TLR signaling to T cell responses.

Immunol Res 2009 ;45(1):25-36

Department of Medicine and Immunology Graduate Group, University of Pennsylvania, 111 Clinical Research Building, 415 Curie Boulevard, Philadelphia, PA 19104, USA.

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May 2010

T cell expression of MyD88 is required for resistance to Toxoplasma gondii.

Proc Natl Acad Sci U S A 2008 Mar 28;105(10):3855-60. Epub 2008 Feb 28.

Department of Medicine, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.

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March 2008

The innate immune system in allograft rejection and tolerance.

J Immunol 2007 Jun;178(12):7503-9

Department of Medicine, University of Pennsylvania School of Medicine, 415 Curie Boulevard, Philadelphia, PA 19104, USA.

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June 2007

CpG DNA inhibits CD4+CD25+ Treg suppression through direct MyD88-dependent costimulation of effector CD4+ T cells.

Immunol Lett 2007 Feb 18;108(2):183-8. Epub 2007 Jan 18.

Department of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.

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February 2007

The role of toll-like receptors in systemic lupus erythematosus.

Springer Semin Immunopathol 2006 Oct 19;28(2):131-43. Epub 2006 Sep 19.

Division of Rheumatology, Department of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.

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October 2006