Abul B M M K Islam

Abul B M M K Islam

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Abul B M M K Islam

Abul B M M K Islam

Publications by authors named "Abul B M M K Islam"

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36Publications

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Rbf Activates the Myogenic Transcriptional Program to Promote Skeletal Muscle Differentiation.

Cell Rep 2019 01;26(3):702-719.e6

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, 900 S. Ashland Avenue, Chicago, IL 60607, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2018.12.080DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6344057PMC
January 2019

Single cell RNA-sequencing identifies a metabolic aspect of apoptosis in Rbf mutant.

Nat Commun 2018 11 27;9(1):5024. Epub 2018 Nov 27.

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, 900 S Ashland Avenue, Chicago, IL, 60607, USA.

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http://www.nature.com/articles/s41467-018-07540-z
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http://dx.doi.org/10.1038/s41467-018-07540-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6258665PMC
November 2018

ChIP-Seq analysis identifies p27(Kip1)-target genes involved in cell adhesion and cell signalling in mouse embryonic fibroblasts.

PLoS One 2017 20;12(11):e0187891. Epub 2017 Nov 20.

Department of Biomedical Sciences, University of Barcelona-IDIBAPS (Institut d'investigacions Biomèdiques August Pi i Sunyer), Barcelona, Spain.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0187891PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5695801PMC
December 2017

Proteomic Analysis Shows Constitutive Secretion of MIF and p53-associated Activity of COX-2 Lung Fibroblasts.

Genomics Proteomics Bioinformatics 2017 12 13;15(6):339-351. Epub 2017 Dec 13.

Department of Rheumatology, New York University Hospital for Joint Diseases, New York, NY 10003, USA; Departments of Pathology, New York University School of Medicine, New York, NY 10003, USA; Department of Bio-Medical Engineering, Virginia Tech, Blacksburg, VA 24060, USA; RheuMatric Inc., Blacksburg, VA 24061, USA. Electronic address:

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http://dx.doi.org/10.1016/j.gpb.2017.03.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5828655PMC
December 2017

Chromatin-wide and transcriptome profiling integration uncovers p38α MAPK as a global regulator of skeletal muscle differentiation.

Skelet Muscle 2016 15;6. Epub 2016 Mar 15.

Department of Experimental and Health Sciences, Pompeu Fabra University (UPF), CIBER on Neurodegenerative diseases (CIBERNED), Barcelona, Spain ; Institució Catalana de Recerca i Estudis Avançats (ICREA), Barcelona, Spain.

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http://dx.doi.org/10.1186/s13395-016-0074-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4791895PMC
October 2016

DNA methylation and hormone receptor status in breast cancer.

Clin Epigenetics 2016 16;8:17. Epub 2016 Feb 16.

Division of Epidemiology and Biostatistics, School of Public Health, University of Illinois at Chicago (UIC), M/C 923, Chicago, 60612 IL USA.

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http://dx.doi.org/10.1186/s13148-016-0184-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4754852PMC
April 2016

Genomic, Lipidomic and Metabolomic Analysis of Cyclooxygenase-null Cells: Eicosanoid Storm, Cross Talk, and Compensation by COX-1.

Genomics Proteomics Bioinformatics 2016 04 21;14(2):81-93. Epub 2016 Mar 21.

Department of Genetic Engineering and Biotechnology, University of Dhaka, Dhaka 1000, Bangladesh; Department of Rheumatology, New York University Hospital for Joint Diseases, New York, NY 10003, USA; Department of Biological Sciences, College of Science, Virginia Tech Blacksburg, VA 24060, USA; Department of Pathology, New York University School of Medicine, New York, NY 10016, USA; RheuMatrix Inc., Blacksburg, VA 24060, USA. Electronic address:

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http://dx.doi.org/10.1016/j.gpb.2014.09.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4880957PMC
April 2016

Conserved antigenic sites between MERS-CoV and Bat-coronavirus are revealed through sequence analysis.

Source Code Biol Med 2016 9;11. Epub 2016 Mar 9.

Department of Genetic Engineering and Biotechnology, University of Dhaka, Science Complex Building, Dhaka, 1000 Bangladesh.

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http://dx.doi.org/10.1186/s13029-016-0049-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4784407PMC
March 2016

Novel regulation and functional interaction of polycistronic miRNAs.

RNA 2016 Jan 9;22(1):129-38. Epub 2015 Nov 9.

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois 60607, USA.

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http://dx.doi.org/10.1261/rna.053264.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4691827PMC
January 2016

Increased mitochondrial function downstream from KDM5A histone demethylase rescues differentiation in pRB-deficient cells.

Genes Dev 2015 Sep 27;29(17):1817-34. Epub 2015 Aug 27.

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois 60607, USA;

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http://dx.doi.org/10.1101/gad.264036.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4573855PMC
September 2015

NF-κB directly mediates epigenetic deregulation of common microRNAs in Epstein-Barr virus-mediated transformation of B-cells and in lymphomas.

Nucleic Acids Res 2014 8;42(17):11025-39. Epub 2014 Sep 8.

Chromatin and Disease Group, Cancer Epigenetics and Biology Programme (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), 08908 L'Hospitalet de Llobregat, Barcelona, Spain

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http://dx.doi.org/10.1093/nar/gku826DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4176189PMC
February 2015

Chromatin-wide profiling of DYRK1A reveals a role as a gene-specific RNA polymerase II CTD kinase.

Mol Cell 2015 Feb 22;57(3):506-20. Epub 2015 Jan 22.

Gene Regulation, Stem Cells and Cancer Programme, Centre for Genomic Regulation (CRG), Dr Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), Dr Aiguader 88, 08003 Barcelona, Spain; Centre for Biomedical Network Research on Rare Diseases (CIBERER), Spain; Institució Catalana de Recerca i Estudis Avançats (ICREA), Passeig Lluís Companys 23, 08010 Barcelona, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2014.12.026DOI Listing
February 2015

Identification of Cdca7 as a novel Notch transcriptional target involved in hematopoietic stem cell emergence.

J Exp Med 2014 Nov 10;211(12):2411-23. Epub 2014 Nov 10.

Program de Recerca en Càncer, Institut Hospital del Mar d'Investigacions Mèdiques, Parc de Recerca Biomèdica de Barcelona, 08003 Barcelona, Spain

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http://dx.doi.org/10.1084/jem.20131857DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4235648PMC
November 2014

Genomic analysis and differential expression of HMG and S100A family in human arthritis: upregulated expression of chemokines, IL-8 and nitric oxide by HMGB1.

DNA Cell Biol 2014 Aug 6;33(8):550-65. Epub 2014 Jun 6.

1 Department of Bio-Medical Engineering, Virginia Tech and Virginia College of Osteopathic Medicine , RheuMatrix, Inc., Blacksburg, Virginia.

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http://dx.doi.org/10.1089/dna.2013.2198DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4117271PMC
August 2014

An intronic microRNA links Rb/E2F and EGFR signaling.

PLoS Genet 2014 Jul 24;10(7):e1004493. Epub 2014 Jul 24.

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1004493DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4109884PMC
July 2014

Mapping of six somatic linker histone H1 variants in human breast cancer cells uncovers specific features of H1.2.

Nucleic Acids Res 2014 Apr 29;42(7):4474-93. Epub 2014 Jan 29.

Department of Molecular Genomics, Institut de Biologia Molecular de Barcelona (IBMB-CSIC), Barcelona, E-08028 Spain, Research Programme on Biomedical Informatics, Universitat Pompeu Fabra, Barcelona, E-08003 Spain, Department of Genetic Engineering, Biotechnology, University of Dhaka, Dhaka-1000, Bangladesh, Centro de Investigación Príncipe Felipe, Valencia, E-46012 Spain and Institució Catalana de Recerca i Estudis Avançats (ICREA), Barcelona, E-08010 Spain.

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http://dx.doi.org/10.1093/nar/gku079DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985652PMC
April 2014

Epstein-Barr virus-mediated transformation of B cells induces global chromatin changes independent to the acquisition of proliferation.

Nucleic Acids Res 2014 Jan 3;42(1):249-63. Epub 2013 Oct 3.

Chromatin and Disease Group, Cancer Epigenetics and Biology Programme (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Avda. Gran Via 199-203, 08908 L'Hospitalet de Llobregat, Barcelona, Spain, Department of Experimental and Health Sciences, Barcelona Biomedical Research Park, Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain, Department of Genetic Engineering and Biotechnology, University of Dhaka, Dhaka 1000, Bangladesh, Center for Integrated Protein Science and Adolf-Butenandt Institute, Ludwig Maximilians University of Munich, 80336 Munich, Germany and CR-UK Institute for Cancer Studies, University of Birmingham, Birmingham B15 2TT, UK.

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http://dx.doi.org/10.1093/nar/gkt886DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3874198PMC
January 2014

Functional heterogeneity of cancer-associated fibroblasts from human colon tumors shows specific prognostic gene expression signature.

Clin Cancer Res 2013 Nov 19;19(21):5914-26. Epub 2013 Sep 19.

Authors' Affiliations: Departments of Medical Oncology and Pathology, Hospital Universitario Puerta de Hierro Majadahonda, Majadahonda; Functional Proteomics Laboratory, Centro de Investigaciones Biológicas (CIB-CSIC), Madrid; Programa de Recerca en Càncer, IMIM-Hospital del Mar, Barcelona, Spain; and Department of Genetic Engineering and Biotechnology, University of Dhaka, Dhaka, Bangladesh.

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http://dx.doi.org/10.1158/1078-0432.CCR-13-0694DOI Listing
November 2013

Loss of dE2F compromises mitochondrial function.

Dev Cell 2013 Nov;27(4):438-51

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, IL 60607, USA.

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http://dx.doi.org/10.1016/j.devcel.2013.10.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3866969PMC
November 2013

Identification of novel markers in rheumatoid arthritis through integrated analysis of DNA methylation and microRNA expression.

J Autoimmun 2013 Mar 8;41:6-16. Epub 2013 Jan 8.

Chromatin and Disease Group, Cancer Epigenetics and Biology Programme, Bellvitge Biomedical Research Institute, 08907 L'Hospitalet de Llobregat, Barcelona, Spain.

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https://linkinghub.elsevier.com/retrieve/pii/S08968411120015
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http://dx.doi.org/10.1016/j.jaut.2012.12.005DOI Listing
March 2013

Drosophila GAGA factor is required for full activation of the dE2f1-Yki/Sd transcriptional program.

Cell Cycle 2012 Nov 15;11(22):4191-202. Epub 2012 Oct 15.

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, IL, USA.

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http://dx.doi.org/10.4161/cc.22486DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3524215PMC
November 2012

Coordinated repression of cell cycle genes by KDM5A and E2F4 during differentiation.

Proc Natl Acad Sci U S A 2012 Nov 23;109(45):18499-504. Epub 2012 Oct 23.

Department of Biochemistry and Molecular Genetics, University of Illinois, Chicago, IL 60607, USA.

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http://dx.doi.org/10.1073/pnas.1216724109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3494949PMC
November 2012

Co-regulation of histone-modifying enzymes in cancer.

PLoS One 2011 23;6(8):e24023. Epub 2011 Aug 23.

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0024023PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3160334PMC
February 2012

mir-11 limits the proapoptotic function of its host gene, dE2f1.

Genes Dev 2011 Sep 19;25(17):1820-34. Epub 2011 Aug 19.

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois 60607, USA.

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http://dx.doi.org/10.1101/gad.16947411DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3175718PMC
September 2011

Selective targeting of histone methylation.

Cell Cycle 2011 Feb 1;10(3):413-24. Epub 2011 Feb 1.

Research Unit on Biomedical Informatics, Department of Experimental Health and Sciences, PRBB, Universitat Pompeu Fabra, Barcelona, Spain.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3115016PMC
http://dx.doi.org/10.4161/cc.10.3.14705DOI Listing
February 2011

Cooperation between dE2F1 and Yki/Sd defines a distinct transcriptional program necessary to bypass cell cycle exit.

Genes Dev 2011 Feb;25(4):323-35

Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois 60607, USA.

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http://dx.doi.org/10.1101/gad.1999211DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3042156PMC
February 2011